BAC Information

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BAC

Clone NameB6Ng01-163H16
ChromosomeX (Build37)
Map Location 56,006,386 - 56,007,558
singlet/doubletsinglet
Overlap genenone
Upstream geneZic3, LOC631581, LOC631621
Downstream gene4930550L24Rik, Fgf13
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-163H16.bB6Ng01-163H16.g
ACCDH956054DH956055
length1,1661,115
definitionDH956054|Mus musculus domesticus DNA, BAC clone: B6Ng01-163H16, 5' end.DH956055|Mus musculus domesticus DNA, BAC clone: B6Ng01-163H16, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattctctggaaatattacagaagaataggaaaatagactatagt
cattgcaaacaccatttaaatattgtgtagagtagaaaactaaactacct
aaatatttaataaagggaaattagcttagtaaagtggcaatgatttaatg
atggagtattatatagtcattataatttgactatggtagataaagtaaat
gagatagaaaatatttataacacagagtgagaatgcatagactaagaatg
gcaagatgctgtaattctggccttgagaaataaatttttcagtagagtgc
attccatttctctgtcctcatttcccaggagagagatcctgcttcattcc
caggaggaagtggtatcagaaggacattgaaaggcctggctttatttctc
actcttcctctcctagggaagaaacatgacttgcctgatttaaggtgcag
aaggctatcgccgggtacatgtatatacctttttcttgctttctccagtt
ttgaggacatttctctctacccttgctttcctgcaaggttttgacaggag
cgttgggccctataaccctcaatcttaaggcattccatgtgcttaactaa
gtaaccacctagtctatagacccacctttctccaaatgtagctctcctga
tgtagacttaatccaatctatctttatgaattataaacaatactaactta
acctgacttctgtgttcatttctcaattgcttttagaaaatgaatgcaaa
gtaggaataatgatcattccaaatacaggtgtatgtaatcttataataca
gtctggcaaaggaagcacatgggtttattcgaaaaaaacactccacatgt
ggctactaatcagctatctttcttgtattttgtactgtatttatcttgtt
tacatatgaacagttccacacccaggtagacaataactacatctcccgaa
tgcagtccagacacactgtatagctgctaaacacctagaaaccacttcac
tagacatagacaagcttcacatggcataggtattaatattaacattttaa
ggtcatccatgcttctaaatgggagaagcctgatttaagggaacagtatt
tcctttgaccttagcaattgtaaaaaaattcttgggagaacaaaattgac
agaattccttgacaga
gaattccttggtaagctctgtaccccattttttaatggggttatttgaat
ttctagagtccagcttcttgagctctttgtatatattggatattagtccc
ctattagatttaggattggtaaaaaccctttcccaatctgttggtggcct
ttttgtcttattgacagtatcttttgtcttacagaagctttgcaatttta
tgaggtcccatttgttgattcttgatcttacagcacaagccattgctgtt
ctgatttggaatttttcccctgtgcccatatcttcaagacttttccatac
tttctgctctataaatttaagtgtctctggttttatgtggagttctttga
tccacttagatttgagctttgtacaaggagatacaaatgtatcaattcga
attcttctacatgataactgccaattgtgccagcaccatttgttgaaaat
gctgtcttttttccactggatggttttagctcccttgtcaaagatcaagt
ggccacaggtgtgtgggttcatttctgaatcttcaattctattttattga
tctacctatatgttgctgtaccagtatcatgcagggtttttttttttttt
ttttacaattgctctgtagtacagcttgaggtcaggcatggtgattccat
cagaggttcttttatttttgagaatagtgtttgctttcctaggtattttg
ctattccagatgaatttgcaaattgccctttctaactcagtgaagaactg
agttggaattttgatggggattgcattaaatctgtagattgctttcggca
gggtaggcattttgattatattaatcctgccaatccatgagcatgggaga
tctttccatcttctgagatcttcattttttttttcttcagagacttgaga
tctatcatacagatctttcacttcctagttagagtcacaccagtatttta
ttattatttgtgattattgtgaaaggtcgttgttctctattattccatcc
tgtttatcgttggtatagaaaagacactgattgtttagtttatttatata
cagctttcacatcgagctgttatacaagattcagagattctgggaaaatt
aggcattataatcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_56006386_56007558
seq2: B6Ng01-163H16.b_43_1208 (reverse)

seq1  TCTGTCTCCAGGAA-TCTGTCAATTTTGTCCT-CCAAGAATTTTTTTTTT  48
      ||||  || ||||| |||||||||||||| || |||||||  ||||||| 
seq2  TCTG--TCAAGGAATTCTGTCAATTTTGTTCTCCCAAGAA--TTTTTTTA  46

seq1  CAAATGCTAGGGTC-AAGGGATTACTGTTTCGCTTTAAATCAGGC-TCTC  96
      ||| ||||| |||| |||| | |||||||   | ||||||||||| ||||
seq2  CAATTGCTAAGGTCAAAGGAAATACTGTT--CCCTTAAATCAGGCTTCTC  94

seq1  CCATTTAGAGCAATGGATGACCCTTAAATGTTAAATATTAATACCTATGC  146
      |||||||||   |||||||||| | ||||||| |||||||||||||||| 
seq2  CCATTTAGAAGCATGGATGACCTTAAAATGTT-AATATTAATACCTATG-  142

seq1  CCATGTGAAGCTTGTCTATGTTCTAGTGAAGTGGTTTCTAGGTGTTTAGC  196
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CCATGTGAAGCTTGTCTATG-TCTAGTGAAGTGGTTTCTAGGTGTTTAGC  191

seq1  AGCTATACAGTGTGTCTTGGACTGCATTCGGGAGATGTAGTTATTGTCTA  246
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AGCTATACAGTGTGTC-TGGACTGCATTCGGGAGATGTAGTTATTGTCTA  240

seq1  CCTGGGTGTGGAACTGTTCATATGTAAACAAGATAAATACAGTACAAAAT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGTGTGGAACTGTTCATATGTAAACAAGATAAATACAGTACAAAAT  290

seq1  ACAAGAAAGATAGCTGATTAGTAGCCACATGTGGAGTGTTTTTTTCGAAT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGAAAGATAGCTGATTAGTAGCCACATGTGGAGTGTTTTTTTCGAAT  340

seq1  AAACCCATGTGCTTCCTTTTGCCAGACTGTATTATAAGATTACATACACC  396
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AAACCCATGTGCTTCC-TTTGCCAGACTGTATTATAAGATTACATACACC  389

seq1  TGTATTTGGAATGATCATTATTCCTACTTTGCATTCATTTTCTAAAAGCA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTTGGAATGATCATTATTCCTACTTTGCATTCATTTTCTAAAAGCA  439

seq1  ATTGAGAAATGAACACAGAAGTCAGGTTAAGTTAGTATTGTTTATAATTC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGAAATGAACACAGAAGTCAGGTTAAGTTAGTATTGTTTATAATTC  489

seq1  ATAAAGATAGATTGGATTAAGTCTACATCAGGAGAGCTACATTTGGAGAA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGATAGATTGGATTAAGTCTACATCAGGAGAGCTACATTTGGAGAA  539

seq1  AGGTGGGTCTATAGACTAGGTGGTTACTTAGTTAAGCACATGGAATGCCT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGGTCTATAGACTAGGTGGTTACTTAGTTAAGCACATGGAATGCCT  589

seq1  TAAGATTGAGGGTTATAGGGCCCAACGCTCCTGTCAAAACCTTGCAGGAA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATTGAGGGTTATAGGGCCCAACGCTCCTGTCAAAACCTTGCAGGAA  639

seq1  AGCAAGGGTAGAGAGAAATGTCCTCAAAACTGGAGAAAGCAAGAAAAAGG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGGGTAGAGAGAAATGTCCTCAAAACTGGAGAAAGCAAGAAAAAGG  689

seq1  TATATACATGTACCCGGCGATAGCCTTCTGCACCTTAAATCAGGCAAGTC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATACATGTACCCGGCGATAGCCTTCTGCACCTTAAATCAGGCAAGTC  739

seq1  ATGTTTCTTCCCTAGGAGAGGAAGAGTGAGAAATAAAGCCAGGCCTTTCA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTCTTCCCTAGGAGAGGAAGAGTGAGAAATAAAGCCAGGCCTTTCA  789

seq1  ATGTCCTTCTGATACCACTTCCTCCTGGGAATGAAGCAGGATCTCTCTCC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCTTCTGATACCACTTCCTCCTGGGAATGAAGCAGGATCTCTCTCC  839

seq1  TGGGAAATGAGGACAGAGAAATGGAATGCACTCTACTGAAAAATTTATTT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAATGAGGACAGAGAAATGGAATGCACTCTACTGAAAAATTTATTT  889

seq1  CTCAAGGCCAGAATTACAGCATCTTGCCATTCTTAGTCTATGCATTCTCA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGGCCAGAATTACAGCATCTTGCCATTCTTAGTCTATGCATTCTCA  939

seq1  CTCTGTGTTATAAATATTTTCTATCTCATTTACTTTATCTACCATAGTCA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTGTTATAAATATTTTCTATCTCATTTACTTTATCTACCATAGTCA  989

seq1  AATTATAATGACTATATAATACTCCATCATTAAATCATTGCCACTTTACT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATAATGACTATATAATACTCCATCATTAAATCATTGCCACTTTACT  1039

seq1  AAGCTAATTTCCCTTTATTAAATATTTAGGTAGTTTAGTTTTCTACTCTA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTAATTTCCCTTTATTAAATATTTAGGTAGTTTAGTTTTCTACTCTA  1089

seq1  CACAATATTTAAATGGTGTTTGCAATGACTATAGTCTATTTTCCTATTCT  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATATTTAAATGGTGTTTGCAATGACTATAGTCTATTTTCCTATTCT  1139

seq1  TCTGTAATATTTCCAGAGAATGAATTC  1173
      |||||||||||||||||||||||||||
seq2  TCTGTAATATTTCCAGAGAATGAATTC  1166