BAC Information

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BAC

Clone NameB6Ng01-164H19
ChromosomeX (Build37)
Map Location 63,798,302 - 63,799,457
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC671840
Downstream geneSlitrk2, LOC666824, LOC627734, EG666828
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-164H19.bB6Ng01-164H19.g
ACCDH956797DH956798
length1,1501,213
definitionDH956797|Mus musculus domesticus DNA, BAC clone: B6Ng01-164H19, 5' end.DH956798|Mus musculus domesticus DNA, BAC clone: B6Ng01-164H19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgctgctaaacagcatgtgttaatctccagatattagcactta
tttaagcactagtaagagttaaatttttagcacagaacagtaataaagtg
ttaatgttccccagagcttaatgaagcacagagtcataataaagagttaa
tgaagagttgagttttcagtgtttaatgaagcacagaacaataatagtta
taaaataaagatacagcatttaataaagtacagaggtttataagataaaa
ataaagcacagagagattaaaaaaagaagaagaagaagaagccacagagt
tcagagttaaagagaaaaggagccagcagttttcagccagagaataagca
agagacttaagtctccagaagccaccagctaataatatccagtacagtta
tagaaagttacaagggcagacatcattagtcttctgggccttatccaatt
ctgtgtcccacctcaactcatttccctaaggctggtcaggacccaggcag
ctttatgtctcgctgcttttattttaaaatagatgcttttaactaatcca
aaaactcaagcatttaaatgaactactcttgttgagtttcaaagtaaata
tctgtgaatggtattatgattttcctgtttttactgtctagcattcttac
tgttcagttctatagtcaggcactgaggtaatcttgtagatcaattactt
tttaaaaatgtaactgctttaataactttaataacatgatataacttaca
gaatgcatatttgtgcatacacacatagaaaagatcaagagaaataatgt
tatagaaagcatcaatacttatgcttgatataaaatttttaattaatatg
aaggataaagtagaaaaaatagaaatgaatctaaattagtcttaatgttt
cattatcaatgtgttttatattataattaactaaaggttagagattaaag
tcccagagtcctcttgcctgtcttattaagccatacactgatggtgttac
cactctagtcaggagtttgtatcatgaggtatatatctacatgtttttta
taaccaaaccaattagagagccacactttgctgtactgttggcctatttc
ctccttatgtattctccctttcttttatggattcaaaccttgttcctcta

gaattccaggaaaacacaaataggcgaaggaagtgaacaaaaccacccaa
gatcttaaaatagaaatagaaacaataaagaaattacaaagggagacaac
cacagagataaaatcataggaaagagatcaggagtcacagatgcaagtat
caccaacagaatacaagagagagaagaatctcaggtgcagaagataccat
agaaaacattgacacgggtccaggacccgccgaacttaggaaattagtct
gaacaggtgagagggtgcgccagagaacctgacagcttctggaacgggca
gaagcacagaggcgctgaggcagcaccctgtgtgggccggggacagccgg
ccaccttccggaccggaggacaggtgcccgcccggctggggaggcgacct
aagccacagcagcagcggtcgccatcttggtccgggacccgccgaactta
ggaaattagtctgaacaggtgagagggtgcgccagagaacctgacagctt
ctggaacaggcggaagcacagaggcgctgaggcagcaccctgtgtgggcc
ggggacagccggccaccttccggaccggaggacaggtgcccgcccggctg
gggaggcgacctaagccacagcagcagcggtcgccatcttggtcccggga
ctccaaggaacttaggaaattagtctgcttaggtgagagtctgtaccacc
tgggaactgccaaagcaacacagtgtctgagaaaggtcctgttttgggcc
ttcttcttcggccaggaggaggtccaaatacaagatatctgcgcaccttc
cctgtaaaagagcttgccagcagagagtgctctgagcactaaaactcaga
ggagagaatctgtctcccaggtctgctgatagacggtaacaaaatcacca
gaagaacatctctaaacagagtcaactataactactaactccagagatac
cagatggcgaaagggtaaacgagaatcttactaacaggaaccaagaccac
tcacatcacagaacccagcacaccccacttcgcccagttcagggacccaa
cccactgagacttagactagattaaagcatatctcatgatgatggtgaga
ggactcagaagactttataattcctaagaaatacaggaaaactctgctta
aggtccaggtctaggaaaacgtaaaaccaactcaaacggtagagactctc
ttcgagaaagagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_63798302_63799457
seq2: B6Ng01-164H19.b_45_1194 (reverse)

seq1  TAGAGGAAACAAGGTTTTGAATCAATAAAAGAAA-GGAGAATAAACAATA  49
      |||||| ||||||| |||||||| |||||||||| |||||||| | ||  
seq2  TAGAGG-AACAAGG-TTTGAATCCATAAAAGAAAGGGAGAATACATAAGG  48

seq1  GGGAGAATAGCCCAACCAGTAACAGCAAAGTGTGCTTCTCTAATTGTTTT  99
       ||| ||||| |||| |||| |||||||||||||  |||||||||| |||
seq2  AGGA-AATAGGCCAA-CAGT-ACAGCAAAGTGTGGCTCTCTAATTGGTTT  95

seq1  GTTTTAATAAAAACATGTAGATATATACCTTCATGATACAAACTCCTGAC  149
      |  |||  ||||||||||||||||||||| ||||||||||||||||||||
seq2  G-GTTATAAAAAACATGTAGATATATACC-TCATGATACAAACTCCTGAC  143

seq1  TAGAGTGGTAACACCATCAGTGTATGGCTTAATAAGACAGGCAAGAGGAC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGTGGTAACACCATCAGTGTATGGCTTAATAAGACAGGCAAGAGGAC  193

seq1  TCTGGGACTTTAATCTCTAACCTTTAGTTAATTATAATATTAAACACATT  249
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TCTGGGACTTTAATCTCTAACCTTTAGTTAATTATAATATAAAACACATT  243

seq1  GATAATGAAACATTAAGACTAATTTAGATTCATTTCTATTTTTTCTACTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATGAAACATTAAGACTAATTTAGATTCATTTCTATTTTTTCTACTT  293

seq1  TATCCTTCATATTAATTAAAAATTTTATATCAAGCATAAGTATTGATGCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTTCATATTAATTAAAAATTTTATATCAAGCATAAGTATTGATGCT  343

seq1  TTCTATAACATTATTTCTCTTGATCTTTTCTATGTGTGTATGCACAAATA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATAACATTATTTCTCTTGATCTTTTCTATGTGTGTATGCACAAATA  393

seq1  TGCATTCTGTAAGTTATATCATGTTATTAAAGTTATTAAAGCAGTTACAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTCTGTAAGTTATATCATGTTATTAAAGTTATTAAAGCAGTTACAT  443

seq1  TTTTAAAAAGTAATTGATCTACAAGATTACCTCAGTGCCTGACTATAGAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAAAGTAATTGATCTACAAGATTACCTCAGTGCCTGACTATAGAA  493

seq1  CTGAACAGTAAGAATGCTAGACAGTAAAAACAGGAAAATCATAATACCAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACAGTAAGAATGCTAGACAGTAAAAACAGGAAAATCATAATACCAT  543

seq1  TCACAGATATTTACTTTGAAACTCAACAAGAGTAGTTCATTTAAATGCTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGATATTTACTTTGAAACTCAACAAGAGTAGTTCATTTAAATGCTT  593

seq1  GAGTTTTTGGATTAGTTAAAAGCATCTATTTTAAAATAAAAGCAGCGAGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTTTGGATTAGTTAAAAGCATCTATTTTAAAATAAAAGCAGCGAGA  643

seq1  CATAAAGCTGCCTGGGTCCTGACCAGCCTTAGGGAAATGAGTTGAGGTGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAGCTGCCTGGGTCCTGACCAGCCTTAGGGAAATGAGTTGAGGTGG  693

seq1  GACACAGAATTGGATAAGGCCCAGAAGACTAATGATGTCTGCCCTTGTAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACAGAATTGGATAAGGCCCAGAAGACTAATGATGTCTGCCCTTGTAA  743

seq1  CTTTCTATAACTGTACTGGATATTATTAGCTGGTGGCTTCTGGAGACTTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTATAACTGTACTGGATATTATTAGCTGGTGGCTTCTGGAGACTTA  793

seq1  AGTCTCTTGCTTATTCTCTGGCTGAAAACTGCTGGCTCCTTTTCTCTTTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCTTGCTTATTCTCTGGCTGAAAACTGCTGGCTCCTTTTCTCTTTA  843

seq1  ACTCTGAACTCTGTGGCTTCTTCTTCTTCTTCTTTTTTTAATCTCTCTGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGAACTCTGTGGCTTCTTCTTCTTCTTCTTTTTTTAATCTCTCTGT  893

seq1  GCTTTATTTTTATCTTATAAACCTCTGTACTTTATTAAATGCTGTATCTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTATTTTTATCTTATAAACCTCTGTACTTTATTAAATGCTGTATCTT  943

seq1  TATTTTATAACTATTATTGTTCTGTGCTTCATTAAACACTGAAAACTCAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTATAACTATTATTGTTCTGTGCTTCATTAAACACTGAAAACTCAA  993

seq1  CTCTTCATTAACTCTTTATTATGACTCTGTGCTTCATTAAGCTCTGGGGA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCATTAACTCTTTATTATGACTCTGTGCTTCATTAAGCTCTGGGGA  1043

seq1  ACATTAACACTTTATTACTGTTCTGTGCTAAAAATTTAACTCTTACTAGT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTAACACTTTATTACTGTTCTGTGCTAAAAATTTAACTCTTACTAGT  1093

seq1  GCTTAAATAAGTGCTAATATCTGGAGATTAACACATGCTGTTTAGCAGCA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAAATAAGTGCTAATATCTGGAGATTAACACATGCTGTTTAGCAGCA  1143

seq1  GGAATTC  1156
      |||||||
seq2  GGAATTC  1150