BAC Information

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BAC

Clone NameB6Ng01-167B21
ChromosomeX (Build37)
Map Location 97,004,454 - 97,005,629
singlet/doubletsinglet
Overlap genenone
Upstream geneOphn1, Yipf6, LOC100042932, Stard8, LOC436219, Efnb1, Pja1, LOC100042947, Pcna-ps1
Downstream geneEG620592, Eda, Dgat2l4, Otud6a, Igbp1, LOC668257, Dgat2l3, LOC620734, P2ry4, Arr3, Pdzd11, Kif4, Gdpd2, Dlg3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-167B21.bB6Ng01-167B21.g
ACCDH958700DH958701
length7421,174
definitionDH958700|Mus musculus domesticus DNA, BAC clone: B6Ng01-167B21, 5' end.DH958701|Mus musculus domesticus DNA, BAC clone: B6Ng01-167B21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgtcatttttctcttgcacttcacacgttgtgtaactgattttc
tattgactgcccatccacctttgagtttgatgtatgtctgaaaaccagta
gaggcacccaaatcaaaagcaaaccaaaggggtttggttgatggttttct
ctattcttccacggtatttatcagcttccctctctgttcagcttgagctt
ggagttccttgtgtagtatggaagaggaaacgtgtgtgtggcggtaacct
tgggaccctttcgtacttgttgctgttctcactgactgtattccagcacc
agcccacaatcttaggcagccggaaaagacatataacagacggttctctc
tctctctctctctctctctctctctctctctctctctctctctctctctc
acacacacactctctcatacacacaccccctatatatagatatgtatata
gatatagatggggggtgtagcgctctactctgtctgtctctatctttttt
gtctgtgtatgagatgtatctcccccgagaaaagaggcacatacatacat
atttgtgtatgtctgtgtgtgtatgatggatgacgaaagcatgtatttaa
acacccaaaaattgacaaacacgcaagctctctctcatatactcaccctg
agatatgagactaatgagggagtgtctcatagtgtgtgagcgcatttaag
actcactcactcacagtaaatagaatttactattgtcaatgt
gaattccatcctcctctgatacacctgaagggtaagtaatttcttgggga
agaagatgagggcagttacctgtgctagcttgtttagctataaaatcaaa
agacttggctgtttaaactctacaaatgagctaaagtccaaaagcacttt
tgaactgggaaaagttcaaaggagagctaagtcttcagaacaggaagaaa
agggctgctaactgagatacctgagccccaaacatcatctccagaggcca
catagccaaggcaataaacttgtcaacataggagtttagatcagcaaagg
agggtttcaagtctcagagacatggcctgtgcaagtctcacatgagtttc
ctccttaagtttcctgatcatgtgccagattcaaaccaattcaagagacc
tcctggcttccatacagtgggctcaggtattcagtcctttcctattctcc
ttaaagctgctggtaacaacccatccctttgggtgtgtacaactctcctt
tgaattagagtgagataaagccagcctaacatacttcccattgataaatc
taaagaccttcatcataaaaaggaagctactgaccaccaggaaagcaaaa
aagaacagaagtcactaaataaaaatattgcatttactaggtttcatgga
ttgttatactggaatgactatacaatagcaaagacccatcttccaaagtc
ttcagagagctggcatttagaaccggtctcctagagggacactggaagct
catttagtgttactttcttccactatccttatcttaaagatggaggttgt
tttcccctaatatacaatatataatgcactcttctcaccccaatatacat
ttataatcctcccaaaccagacctaaagcaaagatgtgctggcctccatt
ctttgcagaggaaatctagatctgtgaggatatttgcactggtgctgaaa
agaagcactcagcccacaagcttcagctatacatagacattgtccctctt
agggagtttcctcccagcagagaatcagacttaataacctgcctgtgaat
tgtgtctcagcacagacagcacaggaaagacaacaggagagaggaaattg
ggaggtttatctcggttctcacaaaaacctatgactaatatggtacccac
ggctatgtttaatatacataagcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_97004454_97005629
seq2: B6Ng01-167B21.g_65_1238

seq1  GAATTCCATCCTCCTCTGATACACCTGAAGGGTAAGTAATTTCTTGGGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCCTCCTCTGATACACCTGAAGGGTAAGTAATTTCTTGGGGA  50

seq1  AGAAGATGAGGGCAGTTACCTGTGCTAGCTTGTTTAGCTATAAAATCAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGATGAGGGCAGTTACCTGTGCTAGCTTGTTTAGCTATAAAATCAAA  100

seq1  AGACTTGGCTGTTTAAACTCTACAAATGAGCTAAAGTCCAAAAGCACTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTGGCTGTTTAAACTCTACAAATGAGCTAAAGTCCAAAAGCACTTT  150

seq1  TGAACTGGGAAAAGTTCAAAGGAGAGCTAAGTCTTCAGAACAGGAAGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTGGGAAAAGTTCAAAGGAGAGCTAAGTCTTCAGAACAGGAAGAAA  200

seq1  AGGGCTGCTAACTGAGATACCTGAGCCCCAAACATCATCTCCAGAGGCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTGCTAACTGAGATACCTGAGCCCCAAACATCATCTCCAGAGGCCA  250

seq1  CATAGCCAAGGCAATAAACTTGTCAACATAGGAGTTTAGATCAGCAAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGCCAAGGCAATAAACTTGTCAACATAGGAGTTTAGATCAGCAAAGG  300

seq1  AGGGTTTCAAGTCTCAGAGACATGGCCTGTGCAAGTCTCACATGAGTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTTCAAGTCTCAGAGACATGGCCTGTGCAAGTCTCACATGAGTTTC  350

seq1  CTCCTTAAGTTTCCTGATCATGTGCCAGATTCAAACCAATTCAAGAGACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTAAGTTTCCTGATCATGTGCCAGATTCAAACCAATTCAAGAGACC  400

seq1  TCCTGGCTTCCATACAGTGGGCTCAGGTATTCAGTCCTTTCCTATTCTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGCTTCCATACAGTGGGCTCAGGTATTCAGTCCTTTCCTATTCTCC  450

seq1  TTAAAGCTGCTGGTAACAACCCATCCCTTTGGGTGTGTACAACTCTCCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGCTGCTGGTAACAACCCATCCCTTTGGGTGTGTACAACTCTCCTT  500

seq1  TGAATTAGAGTGAGATAAAGCCAGCCTAACATACTTCCCATTGATAAATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTAGAGTGAGATAAAGCCAGCCTAACATACTTCCCATTGATAAATC  550

seq1  TAAAGACCTTCATCATAAAAAGGAAGCTACTGACCACCAGGAAAGCAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGACCTTCATCATAAAAAGGAAGCTACTGACCACCAGGAAAGCAAAA  600

seq1  AAGAACAGAAGTCACTAAATAAAAATATTGCATTTACTAGGTTTCATGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACAGAAGTCACTAAATAAAAATATTGCATTTACTAGGTTTCATGGA  650

seq1  TTGTTATACTGGAATGACTATACAATAGCAAAGACCCATCTTCCAAAGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTATACTGGAATGACTATACAATAGCAAAGACCCATCTTCCAAAGTC  700

seq1  TTCAGAGAGCTGGCATTTAGAACCGGTCTCCTAGAGGGACACTGGAAGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAGAGCTGGCATTTAGAACCGGTCTCCTAGAGGGACACTGGAAGCT  750

seq1  CATTTAGTGTTACTTTCTTCCACTATCCTTATCTTAAAGATGGAGGTTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAGTGTTACTTTCTTCCACTATCCTTATCTTAAAGATGGAGGTTGT  800

seq1  TTTCCCCTAATATACAATATATAATGCACTCTTCTCACCCCAATATACAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCCTAATATACAATATATAATGCACTCTTCTCACCCCAATATACAT  850

seq1  TTATAATCCTCCCAAACCAGACCTAAAGCAAAGATGTGCTGGCCTCCATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAATCCTCCCAAACCAGACCTAAAGCAAAGATGTGCTGGCCTCCATT  900

seq1  CTTTGCAGAGGAAATCTAGATCTGTGAGGATATTTGCACTGGGTGCTGAA  950
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CTTTGCAGAGGAAATCTAGATCTGTGAGGATATTTGCACT-GGTGCTGAA  949

seq1  AAGAAGCACTCAGCCCACAAGCTTCAGCTATACATAGACATTGTCCCCTC  1000
      |||||||||||||||||||||||||||||||||||||||||||||||   
seq2  AAGAAGCACTCAGCCCACAAGCTTCAGCTATACATAGACATTGTCCCTCT  999

seq1  TAGGGAGTTTCCTCCCAGCAGAGAATCAGACTTAATAACCTGCCTGTGAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGAGTTTCCTCCCAGCAGAGAATCAGACTTAATAACCTGCCTGTGAA  1049

seq1  -TGTGTCTCAAGCAACAGAACAGCACA-GAAAGACAACAGGAGAGAAGGA  1098
       |||||||| ||| |||| |||||||| ||||||||||||||||| ||||
seq2  TTGTGTCTC-AGC-ACAG-ACAGCACAGGAAAGACAACAGGAGAG-AGGA  1095

seq1  AAATGGAGTGTTTATC-CTGTTCT-ACAAAAACTAGTGGACTAATAT-GT  1145
      || |||   ||||||| | ||||| ||||||||   | ||||||||| ||
seq2  AATTGGGAGGTTTATCTCGGTTCTCACAAAAACCTAT-GACTAATATGGT  1144

seq1  ACCAACGGCTATGTATAATATACATAGAGCC  1176
      ||| |||||||||| ||||||||||| ||||
seq2  ACCCACGGCTATGTTTAATATACATA-AGCC  1174