BAC Information

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BAC

Clone NameB6Ng01-167N16
ChromosomeX (Build37)
Map Location 41,894,817 - 41,895,946
singlet/doubletsinglet
Overlap genenone
Upstream geneGm362, LOC100039977, LOC100039987, LOC637141, Wdr40c
Downstream geneWdr40b, LOC665585, 1110059M19Rik, LOC100040038
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-167N16.bB6Ng01-167N16.g
ACCDH959243DH959244
length1,1221,159
definitionDH959243|Mus musculus domesticus DNA, BAC clone: B6Ng01-167N16, 5' end.DH959244|Mus musculus domesticus DNA, BAC clone: B6Ng01-167N16, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagatgtgcaaccatgtatatgcacttctatatcaatatctacct
ctatttgtatgtgtgggtgtgttgtccagattataggaggaacaacaaaa
aggtcccgctgctaggactgcaggactgtggcttcttccacagaatatct
gtaaacagcaagtggggctacacagctacataggcaactttctgcatgaa
ggacaaactgaagcctgcctgagagcccagagactggtgatccagacaat
gacagccaatcaggaactgccactttgaggacacactttcttggaaccaa
tgggacatctgtgctgttgatgccttctcatgcactgcctccaagggtga
ctccatgcaggacagaggaccaacatcaaaggatgtgaaatttcttctgt
ttttttcagcctttaaaacaaaacaaaacaaaacaaaacaaaaaaaacag
ttggtatatttttctaagtataatgtaattagaccgtttccctccttttc
tttcccctctccttacatgtttattcccttcctaacccctctgttttttc
aataccattgtcaacattctatcatttcacagtgattccattctacagtt
attaagttatatacacatatttgaaggtttggagcaagtatctatagaca
aggctatccagttgtttcagcatatgccaaggagtgacaaatctagtgca
catgttagatttaattttagattttagagatttctcctcactggttttta
gaataaaggaaccatcttggactcctaccaaaagtgtatcaatactctgt
tttcaccaaatcttctatggcacttttttgtctattgttttgttaatctt
tgacattctggctaggctaagataccaccacaaagttgttttgattttca
tttacctaattactttgaacagtgaaaagttttaaatataatctttagct
ttaattttttgaaacctttgcttgcatctctgtgcctgtttcaaattgtc
atttgatatttagattaaaaaaaaaacttggatagtaatctttctcttag
attttagctgaaaatttagctccattttgtggcttctgctcagaacatcc
ctttttctattatatttacatt
gaattctcacgtgagtaataccgaatggctaagaaacacctgtaaaaatg
ttcagcatccctaatcttcagggaaatacaaatcaaaacaacgctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacaga
aggtgttgacaaagatgtggagaaagaggaacactcttccattgttagtg
gtattgcaagcttgtccaaccgctctggaaatcagtctggtggttcctca
gaaaattggacatagttctactggaggatccaccaatacctctcctgggc
atatatccagaaggtatttcaactattaagaaagacacatgctccactat
gttcatagcagccttatttataatagcctgaagctggaaagaatccagat
gcccctcaacagaggaattgatataaaaaatgtagtacatttacacaatg
gagtactactcagctattaaaaaatgaatttatgaaattcctaggcaaat
ggttggacctggagggcattatcctgggtgaggtaacccaatcacaaaag
aactcaaatcatatatacttactgataagtggatattagtccagaaactt
agaatacccaagatataagttacattttgcaaaacacatgaaactcaaga
agaatgaagacccaagtgtagacactttgccccttcttagaattgggaac
aaaatactcatggaaggagttacagagacaaagtttggagctgagacaaa
aggatggaccatctagggactgccatatccagggatccatcccataatca
gcctccaaatgctgacacctttccatacactagcaagattttgctgaaat
gaccctgatatagctgtctcttgtgagactatgctgggcccaagcaaaaa
cataagtggatgctcacagttagctattggatggatcacaggccccaatg
gaggagctagagaaagtacccaaggagctaagagatctgcaccctatagt
agaacacattatgactaaccagtaccctgtagctctgactctagctgcat
atgtatcaaagatgctagtcgcaatcactggaagagactccaatggaatt
gcacttattgccatacaggaaagccagatcaaaagataatggatgaaggg
aattggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_41894817_41895946
seq2: B6Ng01-167N16.b_47_1168 (reverse)

seq1  AATGTAAATATATATAG-AAAAGGGATGTTCTGAGCAGGAAGCCCACAAA  49
      |||||||||||| |||| ||||||||||||||||||| |||| |||||||
seq2  AATGTAAATATA-ATAGAAAAAGGGATGTTCTGAGCA-GAAG-CCACAAA  47

seq1  ATGGGAGCTAAATTTTTCCAGCTAAAAATCTAAGAG-AAGATTACTATCC  98
      || |||||||||||||  ||||| |||||||||||| |||||||||||||
seq2  AT-GGAGCTAAATTTT--CAGCT-AAAATCTAAGAGAAAGATTACTATCC  93

seq1  AAGTTTTTTTTTTTAATCTAAATATCAAATGACCAATTTGAAAACAGGCA  148
      ||| |||||||||||||||||||||||||||| ||||||| |||||||||
seq2  AAG-TTTTTTTTTTAATCTAAATATCAAATGA-CAATTTG-AAACAGGCA  140

seq1  CAGAGATGCAAGCAAAGGTTTCAAAAAATTAAAGCTAAAGATTATATTTA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGATGCAAGCAAAGGTTTCAAAAAATTAAAGCTAAAGATTATATTTA  190

seq1  AAACTTTTCACTGTTCAAAGTAATTAGGTAAATGAAAATCAAAACAACTT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTTTCACTGTTCAAAGTAATTAGGTAAATGAAAATCAAAACAACTT  240

seq1  TGTGGTGGTATCTTAGCCTAGCCAGAATGTCAAAGATTAACAAAACAATA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTGGTATCTTAGCCTAGCCAGAATGTCAAAGATTAACAAAACAATA  290

seq1  GACAAAAAAGTGCCATAGAAGATTTGGTGAAAACAGAGTATTGATACACT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAAAAGTGCCATAGAAGATTTGGTGAAAACAGAGTATTGATACACT  340

seq1  TTTGGTAGGAGTCCAAGATGGTTCCTTTATTCTAAAAACCAGTGAGGAGA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTAGGAGTCCAAGATGGTTCCTTTATTCTAAAAACCAGTGAGGAGA  390

seq1  AATCTCTAAAATCTAAAATTAAATCTAACATGTGCACTAGATTTGTCACT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCTAAAATCTAAAATTAAATCTAACATGTGCACTAGATTTGTCACT  440

seq1  CCTTGGCATATGCTGAAACAACTGGATAGCCTTGTCTATAGATACTTGCT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGCATATGCTGAAACAACTGGATAGCCTTGTCTATAGATACTTGCT  490

seq1  CCAAACCTTCAAATATGTGTATATAACTTAATAACTGTAGAATGGAATCA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACCTTCAAATATGTGTATATAACTTAATAACTGTAGAATGGAATCA  540

seq1  CTGTGAAATGATAGAATGTTGACAATGGTATTGAAAAAACAGAGGGGTTA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAAATGATAGAATGTTGACAATGGTATTGAAAAAACAGAGGGGTTA  590

seq1  GGAAGGGAATAAACATGTAAGGAGAGGGGAAAGAAAAGGAGGGAAACGGT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGGAATAAACATGTAAGGAGAGGGGAAAGAAAAGGAGGGAAACGGT  640

seq1  CTAATTACATTATACTTAGAAAAATATACCAACTGTTTTTTTTGTTTTGT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTACATTATACTTAGAAAAATATACCAACTGTTTTTTTTGTTTTGT  690

seq1  TTTGTTTTGTTTTGTTTTAAAGGCTGAAAAAAACAGAAGAAATTTCACAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTTGTTTTGTTTTAAAGGCTGAAAAAAACAGAAGAAATTTCACAT  740

seq1  CCTTTGATGTTGGTCCTCTGTCCTGCATGGAGTCACCCTTGGAGGCAGTG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGATGTTGGTCCTCTGTCCTGCATGGAGTCACCCTTGGAGGCAGTG  790

seq1  CATGAGAAGGCATCAACAGCACAGATGTCCCATTGGTTCCAAGAAAGTGT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGAAGGCATCAACAGCACAGATGTCCCATTGGTTCCAAGAAAGTGT  840

seq1  GTCCTCAAAGTGGCAGTTCCTGATTGGCTGTCATTGTCTGGATCACCAGT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCAAAGTGGCAGTTCCTGATTGGCTGTCATTGTCTGGATCACCAGT  890

seq1  CTCTGGGCTCTCAGGCAGGCTTCAGTTTGTCCTTCATGCAGAAAGTTGCC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGGCTCTCAGGCAGGCTTCAGTTTGTCCTTCATGCAGAAAGTTGCC  940

seq1  TATGTAGCTGTGTAGCCCCACTTGCTGTTTACAGATATTCTGTGGAAGAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAGCTGTGTAGCCCCACTTGCTGTTTACAGATATTCTGTGGAAGAA  990

seq1  GCCACAGTCCTGCAGTCCTAGCAGCGGGACCTTTTTGTTGTTCCTCCTAT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACAGTCCTGCAGTCCTAGCAGCGGGACCTTTTTGTTGTTCCTCCTAT  1040

seq1  AATCTGGACAACACACCCACACATACAAATAGAGGTAGATATTGATATAG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGGACAACACACCCACACATACAAATAGAGGTAGATATTGATATAG  1090

seq1  AAGTGCATATACATGGTTGCACATCTGAATTC  1130
      ||||||||||||||||||||||||||||||||
seq2  AAGTGCATATACATGGTTGCACATCTGAATTC  1122