BAC Information

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BAC

Clone NameB6Ng01-167O21
ChromosomeX (Build37)
Map Location 5,526,170 - 5,526,686
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042267, LOC100042275, LOC668967, LOC434724, LOC100043935, LOC668968, LOC546182, Mycs, LOC668969, LOC668970, OTTMUSG00000016453, LOC627412, LOC436185, LOC668971, LOC100043936, LOC668972
Downstream geneNudt11, LOC208428, AU022751, Nudt10, Bmp15, Shroom4, LOC100043937, Dgkk
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-167O21.bB6Ng01-167O21.g
ACCDH959301DH959302
length1,196675
definitionDH959301|Mus musculus domesticus DNA, BAC clone: B6Ng01-167O21, 5' end.DH959302|Mus musculus domesticus DNA, BAC clone: B6Ng01-167O21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctggtgtttttctcaaattcttcaatgacacatttatctttct
attgtgtgttgtttaatctccatggttctgcatgttttccttgctattga
ctatctcctgctttatttcacaggagaggggtagactgaagtaaactact
tcaattttcatatatttatgggctttgctttgtgtcatgataagtgaaca
agtttggaaagtctatcatctgctgaaaatgtgtcttgtggagtgtttgg
atgtactactctgtagatgtctcttaggttcaattcatctatgacataat
ttaactcagatgcttctctgctaatcgttggtcttcatgtcctgtcaatc
tgcaagagtattgaaatcactattggggatagtctgtaattttgtatcta
gtagtatttgttttgagaaaatgtgtatatctgtgttcactgcatattat
ttagatttgtaaagatcactctgaagtgacctttttagactctcctgacc
accatttttgtttttgttttgttttgttttgttttgttttgttttcgttt
ttgtttttgttttttttttttacttctgactacctttgattttaactctg
tgtgtcagatattaggatggcaatactcactgtttcctggcttcatttgc
ttggaatgtattttttcatcctttcaccctaaactagtatgtatttttga
tgtttggttgtcttttttaggcaacaagcagaaatattttgcctttttta
ttcaacctgttattctgtgtctttagattttggaattagggctgttaatg
ttcagagttattgttagaagtttatgttgactcctgtaattttgtaatgt
ttggcattttactaatcctcctttgcttaacaagagttctagcgtaattt
agtcttcactggagctgttggatgagattataattatgtttactctgaag
aattcccttctggtattcttctgtcagctagcttacagattatgagtcct
ttagcctgttttttatcatggatctctttctttctcatcaaccatgaaga
atcatattggtagtctggagtggtattaactttgtaactgacttaccttg
gattggaagttaatatggaagccatgttattctgagccttctacctgatc
gatccacttaatctttgagcataccaaagacctctccctttctgga
gaattcttctgacaaatggagattctccacagatacttaaaagaacagcc
aagttgcacttatacaagaatttatcaaggcctaggaaatgggggtggtg
gtattgcattattcatgagaaggtctgctagagcagaaccccctggtgct
agctttcacaaggctcaaaggagtagcacaaagtgtgactagggtgtgaa
atccttacctgtcattagctgaccataggcagggctgttttatctttact
gtacatattacctggttcctgtcagtccttttgaagtcattcctttgttt
tgtgtcaggtaacttcaatgtactttgcctgctgtgacttcctaccccct
ttattttctgtattatataagactggtgttcactttgtgacaatacattc
agattctacacaacctcttgtgtttatgttgtctgtcattcgccgactcc
ttgtccacctgtaaccagagacccgttctacgcagacagggaccaaaaag
ggtctgctgcactcctgtttctttattgatgtgttggtttacatttgttt
gagtgcatgtgggtacccacagaaaacagaagagggcatcagatcctctg
tatctggagttgcagaaactatgaacattttctagttgttgttgttgttg
ttgttttggggtgttttggggaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_5526170_5526686
seq2: B6Ng01-167O21.g_223_739 (reverse)

seq1  CCCTCCCCAAAACACCCCAAAACAACAACAACAACAACAACTAGAAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCCCAAAACACCCCAAAACAACAACAACAACAACAACTAGAAAATG  50

seq1  TTCATAGTTTCTGCAACTCCAGATACAGAGGATCTGATGCCCTCTTCTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAGTTTCTGCAACTCCAGATACAGAGGATCTGATGCCCTCTTCTGT  100

seq1  TTTCTGTGGGTACCCACATGCACTCAAACAAATGTAAACCAACACATCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTGGGTACCCACATGCACTCAAACAAATGTAAACCAACACATCAA  150

seq1  TAAAGAAACAGGAGTGCAGCAGACCCTTTTTGGTCCCTGTCTGCGTAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAAACAGGAGTGCAGCAGACCCTTTTTGGTCCCTGTCTGCGTAGAA  200

seq1  CGGGTCTCTGGTTACAGGTGGACAAGGAGTCGGCGAATGACAGACAACAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGTCTCTGGTTACAGGTGGACAAGGAGTCGGCGAATGACAGACAACAT  250

seq1  AAACACAAGAGGTTGTGTAGAATCTGAATGTATTGTCACAAAGTGAACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACAAGAGGTTGTGTAGAATCTGAATGTATTGTCACAAAGTGAACAC  300

seq1  CAGTCTTATATAATACAGAAAATAAAGGGGGTAGGAAGTCACAGCAGGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTTATATAATACAGAAAATAAAGGGGGTAGGAAGTCACAGCAGGCA  350

seq1  AAGTACATTGAAGTTACCTGACACAAAACAAAGGAATGACTTCAAAAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACATTGAAGTTACCTGACACAAAACAAAGGAATGACTTCAAAAGGA  400

seq1  CTGACAGGAACCAGGTAATATGTACAGTAAAGATAAAACAGCCCTGCCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACAGGAACCAGGTAATATGTACAGTAAAGATAAAACAGCCCTGCCTA  450

seq1  TGGTCAGCTAATGACAGGTAAGGATTTCACACCCTAGTCACACTTTGTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCAGCTAATGACAGGTAAGGATTTCACACCCTAGTCACACTTTGTGC  500

seq1  TACTCCTTTGAGCCTTG  517
      |||||||||||||||||
seq2  TACTCCTTTGAGCCTTG  517