BAC Information

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BAC

Clone NameB6Ng01-170G17
ChromosomeX (Build37)
Map Location 15,414,560 - 15,415,740
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668991, 4930403L05Rik
Downstream geneLOC100043949, LOC100043950, Cypt6, LOC100038939, LOC668993, Maoa, Maob
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-170G17.bB6Ng01-170G17.g
ACCDH961135DH961136
length1,164993
definitionDH961135|Mus musculus domesticus DNA, BAC clone: B6Ng01-170G17, 5' end.DH961136|Mus musculus domesticus DNA, BAC clone: B6Ng01-170G17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaggcaggaacccaaagggaagagttgaagaagagggcacaaaa
gagtgctgcttctggcttgctcaggtattttcctgtagaaaatccagggt
ctgtatcagtgaccttcggcctctaagttcaataactagtcaagagtatg
ttcccaggatagcctactaatattcctttccccagataatgcttgtgtca
agttgacaaaaagtaaccaggacaccatctatatctattaatgaactatt
cacaatagccaggaagtaaaactatcagcagataggtgaataaaaaaatg
tggaacttatatacaatgaaattctatgtgactaattggttcaacttaag
ataagcagactcagaatgagaaatgtcacattttcctcacattaaaacta
tatgtgtgtgttgttttatgcatgtgtgttttcaggtcatgaatgtagaa
aggtgatcgtgaaaggcaagagagagacttataagaagtgggagacagag
taaaatggaatacatattttaggaacagagaagttgaaactaagagtatt
aaaaagtagaatcaaatgaagaaagggaggagtcactggaaggggtattg
gataaaagaataaatgagaacaaagtatgatatatatacacatacatata
tatgtatacatatatacacatatatgcgtacatatatacatacacacaca
caaacacacacacacacacacacacacacatatatatatatatatatata
tacacatacatatatacatacatatacatattcttgtggactatatattc
cataatgacacctattacatttaatgttaatctaaagttaatctttgaaa
ctgacaaaagaaaatacaaggaacttacagctaaatcattagtaatgatc
aatagtttagaaagctcctggtaaaatacaaatacgcccgctacattgca
tttaactgtggaaaggaagaaaaataatttccttctactttctcagaact
tgacttttcctcctgaaagccgaattataaaggaagcaccaagatatttt
accatgcttccgggaatagatattcttataaccaaaaagctcccagagac
attgactgaatggtttgaacctgaatgtatagaactagaggtacagtgtt
ttatctcaacacta
gaattcttttgtagggtttttatctccaacgttgcctcactttgtgtttt
ctttattgtttctacttccctttttaggtcttatatagttttgttaaatt
acatcacctgtttggttgtgttttcctgtttttctttaaggacttctacc
tctttagcagtattctcctgtatttgtttaagtgagttaaagtccttctt
gatgccctctattattatcatgagatatgcttttaaatctgagtctagct
tttcgggtgtgttgggctatccaggactgtctgaggtgggagtgctgaat
tctgatgatggtgagtggtcttggtttctgttagtaagattcttatgttt
gccttatgccatctggttatttctggaggtatttgttatagttgtctttg
gtcggagcttattcctcctgtgattcttttagcctctgtcagcagatatg
ggagtctagctctctcctgattttcagtggtcagagtactctctgcaggc
aagctctcctcttacagtaaaggtgcacagatatcttgcattcaggcctg
cctactggctgaagatgaaggcctgaagcagggcctgccccagaagctgt
gttacttctgcctgtcccagaagatgtgtagcttctgtagtctgcactct
cacctgctcatactagtctctgagagttccaggacgagaaattgctcccc
caggtgctctgacaaagttctcccaggtggggcagacacctctcctttgg
cggggaaggtgccagcatgtctggagcctgaaaggggtctgccccagaag
ctgtcttgcttctgctgtaccaaagatgtgttgcttctgtagtcagcact
cttcacctgtgcagacaatttctgaaagaaacaggacaaaatggttcctc
cagggttctcgaaacctcccagaaggggacaccaggttttttttttagac
aacaggaacttatattaataatacatgggggtgtagactaggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_15414560_15415740
seq2: B6Ng01-170G17.b_48_1211 (reverse)

seq1  TAGTGTTGAGATTAAAAACCTGTACCTCTAGGTTCTATATCATTCAGGTT  50
      ||||||||||| |||||  ||||||||||| |||||||| ||||||||||
seq2  TAGTGTTGAGA-TAAAACACTGTACCTCTA-GTTCTATA-CATTCAGGTT  47

seq1  CAAA-CATTCAAGTTCAAATGTTCTTTGGG-GCTTCTTTTCGTTATTAGG  98
      |||| ||||| |||   |||| ||| |||| |||  |||| ||||| || 
seq2  CAAACCATTC-AGT--CAATG-TCTCTGGGAGCT--TTTTGGTTATAAGA  91

seq1  ATATCTATTTCCTGTAGCATTTGTTTAATATATCTTTGTGCTTTCCTTTT  148
      ||||||||| || | |||||     ||| ||||||| |||| ||||||| 
seq2  ATATCTATTCCCGGAAGCAT---GGTAAAATATCTTGGTGC-TTCCTTT-  136

seq1  ATTAATCTGTCTTTTTCTAGGAGTAAAAGTCAAGTTCTGAGAAAGGTAGA  198
        ||||  | ||||    ||||| |||||||||||||||||||| |||||
seq2  -ATAATTCGGCTTT---CAGGAGGAAAAGTCAAGTTCTGAGAAA-GTAGA  181

seq1  AGGAAAATATTTTTCTTCC-TTCCACAGTTAAATGCAATTTTTTAATGAG  247
      |||||| |||||||||||| |||||||||||||||||| | |     | |
seq2  AGGAAATTATTTTTCTTCCTTTCCACAGTTAAATGCAA-TGTAGCGGGCG  230

seq1  TATTTGTATTTTACCAGGAGCTTTCTAAACTATTGATCATTACTAATGAT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGTATTTTACCAGGAGCTTTCTAAACTATTGATCATTACTAATGAT  280

seq1  TTAGCTGTAAGTTCCTTGTATTTTCTTTTGTCAGTTTCAAAGATTAACTT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTGTAAGTTCCTTGTATTTTCTTTTGTCAGTTTCAAAGATTAACTT  330

seq1  TAGATTAACATTAAATGTAATAGGTGTCATTATGGAATATATAGTCCACA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTAACATTAAATGTAATAGGTGTCATTATGGAATATATAGTCCACA  380

seq1  AGAATATGTATATGTATGTATATATGTATGTGTATATATATATATATATA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATATGTATATGTATGTATATATGTATGTGTATATATATATATATATA  430

seq1  TATATGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTATGTATA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTATGTATA  480

seq1  TATGTACGCATATATGTGTATATATGTATACATATATATGTATGTGTATA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTACGCATATATGTGTATATATGTATACATATATATGTATGTGTATA  530

seq1  TATATCATACTTTGTTCTCATTTATTCTTTTATCCAATACCCCTTCCAGT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCATACTTTGTTCTCATTTATTCTTTTATCCAATACCCCTTCCAGT  580

seq1  GACTCCTCCCTTTCTTCATTTGATTCTACTTTTTAATACTCTTAGTTTCA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCCTCCCTTTCTTCATTTGATTCTACTTTTTAATACTCTTAGTTTCA  630

seq1  ACTTCTCTGTTCCTAAAATATGTATTCCATTTTACTCTGTCTCCCACTTC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTCTGTTCCTAAAATATGTATTCCATTTTACTCTGTCTCCCACTTC  680

seq1  TTATAAGTCTCTCTCTTGCCTTTCACGATCACCTTTCTACATTCATGACC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAGTCTCTCTCTTGCCTTTCACGATCACCTTTCTACATTCATGACC  730

seq1  TGAAAACACACATGCATAAAACAACACACACATATAGTTTTAATGTGAGG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAACACACATGCATAAAACAACACACACATATAGTTTTAATGTGAGG  780

seq1  AAAATGTGACATTTCTCATTCTGAGTCTGCTTATCTTAAGTTGAACCAAT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTGACATTTCTCATTCTGAGTCTGCTTATCTTAAGTTGAACCAAT  830

seq1  TAGTCACATAGAATTTCATTGTATATAAGTTCCACATTTTTTTATTCACC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCACATAGAATTTCATTGTATATAAGTTCCACATTTTTTTATTCACC  880

seq1  TATCTGCTGATAGTTTTACTTCCTGGCTATTGTGAATAGTTCATTAATAG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGCTGATAGTTTTACTTCCTGGCTATTGTGAATAGTTCATTAATAG  930

seq1  ATATAGATGGTGTCCTGGTTACTTTTTGTCAACTTGACACAAGCATTATC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGATGGTGTCCTGGTTACTTTTTGTCAACTTGACACAAGCATTATC  980

seq1  TGGGGAAAGGAATATTAGTAGGCTATCCTGGGAACATACTCTTGACTAGT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGAAAGGAATATTAGTAGGCTATCCTGGGAACATACTCTTGACTAGT  1030

seq1  TATTGAACTTAGAGGCCGAAGGTCACTGATACAGACCCTGGATTTTCTAC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGAACTTAGAGGCCGAAGGTCACTGATACAGACCCTGGATTTTCTAC  1080

seq1  AGGAAAATACCTGAGCAAGCCAGAAGCAGCACTCTTTTGTGCCCTCTTCT  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAATACCTGAGCAAGCCAGAAGCAGCACTCTTTTGTGCCCTCTTCT  1130

seq1  TCAACTCTTCCCTTTGGGTTCCTGCCTAGAATTC  1181
      ||||||||||||||||||||||||||||||||||
seq2  TCAACTCTTCCCTTTGGGTTCCTGCCTAGAATTC  1164