BAC Information

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BAC

Clone NameB6Ng01-173K02
ChromosomeX (Build37)
Map Location 126,872,330 - 126,873,310
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040570, LOC669120, Diap2
Downstream geneLOC100040092, LOC665773, LOC665799
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-173K02.bB6Ng01-173K02.g
ACCGA001925GA001926
length1,1621,002
definitionB6Ng01-173K02.b B6Ng01-173K02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tccacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctcggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
aatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacatgttggtcctgccaatccatgagcatgggagatctttccatcttc
tgagatcttcttttaatttcttcttcagggactttgaagtttttattcat
acagatctttcactttccttccgttagagtcacgcccgaagatattttta
atattattttgtgggctattggagaaggggtggttggttccctaaatttc
ttttcctcaggccttgttttaattctttgtgtagagaaaaggccattgac
cttggtttgaagttaattttatatccagcttacttcacccggaagcgtgt
tactaggtttagggagttctctgtgtgggatttgtaggcccactttatca
tatactcatact

gaattcatagacactctcatttgtgtttttgaaagactggtttgcagttg
ctaatttatccactcctgtcctgcctcttttatactaatgagctgctgct
aaaatgaactaaggtgacaaagaagttgtgtggttttctacacatcactg
gggctttcatgtcataaattcagcatccaagagacctcactcgggcacaa
aagcacttgggtgtaccttacagctcaaacttacatggccaaaagaagca
agatggcatgatggcatgtaagaccactggaggtacaatatttctgaagt
aggacccttaacaaagggcacaggctattaatgcttctagaaacatcatg
tttaattcctctgtgaaagatttagcagcttagtggaaagatgcagctaa
agggaaaaaacagtatgaaagaagagctctgcaaggaaatttgcttaaac
taatattagaaagaaaataattcagaaatggttgcctctaataatctcct
accccaaggctagaagaaaaggtcatagctaattggtacaaaagcagctc
tgcatacttagcaagtggtacccagtgatgagtttcacccaaacactacc
ctttacctgcaattaagtcatgacagatatcacaaattatagcccctccc
caagaagcgataaaatagcacacttcaaaattgaacttcttttctgttta
aagacatttaaagtcacaattaacttttataatccaatgaagtaggggga
cagatgcatcataatggtcaagaaacaaaagccaagtagcaaaataagct
gaagtcatgtaatataaaaatattttttacataatttcgctttaacacaa
tcacaattaaagacagtattttctagtactatgctgggtttaacagataa
cacacatactgcagagcctccctgtaactcaaattagtttttacattaag
taaaatataataataggagagagagagacgagacgagagaagaagaagaa
ga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_126872330_126873310
seq2: B6Ng01-173K02.g_69_1070 (reverse)

seq1  TCTTCTTCTTCTTCT-------------------TCCTATTATTATTATT  31
      |||||||||||||||                   ||||||||||| ||||
seq2  TCTTCTTCTTCTTCTCTCGTCTCGTCTCTCTCTCTCCTATTATTA-TATT  49

seq1  TTACTTAATGTAAAAACTAATTTGAGTTACAGGGAGGCTCTGCAGTATGT  81
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTAATGTAAAAACTAATTTGAGTTACAGGGAGGCTCTGCAGTATGT  99

seq1  GTG-TATCTGTTAAA-CCAGCATAGTACTAGAAAAATACTGTCTTTAATT  129
      ||| ||||||||||| ||||||||||||||| ||||||||||||||||||
seq2  GTGTTATCTGTTAAACCCAGCATAGTACTAG-AAAATACTGTCTTTAATT  148

seq1  GTGATTGTGTTAAAGCG-AATTATGTAAAAAATATTTTTATATTACATGA  178
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GTGATTGTGTTAAAGCGAAATTATGTAAAAAATATTTTTATATTACATGA  198

seq1  CTTCAGCTTATTTTGCTACTTGGCTTTTG-TTCTTGACCATTATGATGCA  227
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CTTCAGCTTATTTTGCTACTTGGCTTTTGTTTCTTGACCATTATGATGCA  248

seq1  TCTGTCCCCCTACTTCATTGGATTATAAAAGTTAATTGTGACTTTAAATG  277
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCCCCCTACTTCATTGGATTATAAAAGTTAATTGTGACTTTAAATG  298

seq1  TCTTTAAACAGAAAAGAAGTTCAATTTTGAAGTGTGCTATTTTATCGCTT  327
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAAACAGAAAAGAAGTTCAATTTTGAAGTGTGCTATTTTATCGCTT  348

seq1  CTTGGGGAGGGGCTATAATTTGTGATATCTGTCATGACTTAATTGCAGGT  377
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGGAGGGGCTATAATTTGTGATATCTGTCATGACTTAATTGCAGGT  398

seq1  AAAGGGTAGTGTTTGGGTGAAACTCATCACTGGGTACCACTTGCTAAGTA  427
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGTAGTGTTTGGGTGAAACTCATCACTGGGTACCACTTGCTAAGTA  448

seq1  TGCAGAGCTGCTTTTGTACCAATTAGCTATGACCTTTTCTTCTAGCCTTG  477
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAGCTGCTTTTGTACCAATTAGCTATGACCTTTTCTTCTAGCCTTG  498

seq1  GGGTAGGAGATTATTAGAGGCAACCATTTCTGAATTATTTTCTTTCTAAT  527
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAGGAGATTATTAGAGGCAACCATTTCTGAATTATTTTCTTTCTAAT  548

seq1  ATTAGTTTAAGCAAATTTCCTTGCAGAGCTCTTCTTTCATACTGTTTTTT  577
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTTTAAGCAAATTTCCTTGCAGAGCTCTTCTTTCATACTGTTTTTT  598

seq1  CCCTTTAGCTGCATCTTTCCACTAAGCTGCTAAATCTTTCACAGAGGAAT  627
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTAGCTGCATCTTTCCACTAAGCTGCTAAATCTTTCACAGAGGAAT  648

seq1  TAAACATGATGTTTCTAGAAGCATTAATAGCCTGTGCCCTTTGTTAAGGG  677
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACATGATGTTTCTAGAAGCATTAATAGCCTGTGCCCTTTGTTAAGGG  698

seq1  TCCTACTTCAGAAATATTGTACCTCCAGTGGTCTTACATGCCATCATGCC  727
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTACTTCAGAAATATTGTACCTCCAGTGGTCTTACATGCCATCATGCC  748

seq1  ATCTTGCTTCTTTTGGCCATGTAAGTTTGAGCTGTAAGGTACACCCAAGT  777
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGCTTCTTTTGGCCATGTAAGTTTGAGCTGTAAGGTACACCCAAGT  798

seq1  GCTTTTGTGCCCGAGTGAGGTCTCTTGGATGCTGAATTTATGACATGAAA  827
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTGTGCCCGAGTGAGGTCTCTTGGATGCTGAATTTATGACATGAAA  848

seq1  GCCCCAGTGATGTGTAGAAAACCACACAACTTCTTTGTCACCTTAGTTCA  877
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCAGTGATGTGTAGAAAACCACACAACTTCTTTGTCACCTTAGTTCA  898

seq1  TTTTAGCAGCAGCTCATTAGTATAAAAGAGGCAGGACAGGAGTGGATAAA  927
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGCAGCAGCTCATTAGTATAAAAGAGGCAGGACAGGAGTGGATAAA  948

seq1  TTAGCAACTGCAAACCAGTCTTTCAAAAACACAAATGAGAGTGTCTATGA  977
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCAACTGCAAACCAGTCTTTCAAAAACACAAATGAGAGTGTCTATGA  998

seq1  ATTC  981
      ||||
seq2  ATTC  1002


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