BAC Information

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BAC

Clone NameB6Ng01-174A12
ChromosomeX (Build37)
Map Location 156,472,233 - 156,623,034
singlet/doubletdoublet
Overlap geneLOC667524, Pdha1
Upstream geneLOC100040371, Rps6ka3, Eif1ay, Mtap7d2, A830080D01Rik, LOC100041359, Sh3kbp1
Downstream geneLOC100041403, LOC100041416, LOC100041427, Gpr64, Phka2, Ppef1, Rs1, Gja6, Scml2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-174A12.bB6Ng01-174A12.g
ACCGA002220GA002221
length588735
definitionB6Ng01-174A12.b B6Ng01-174A12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(156,622,441 - 156,623,034)(156,472,233 - 156,472,965)
sequence
tttctatcccttgtcttgtagcatatggttttcctagcagctaagaaagg
acattgtaggcagggcattgttggaacttggttttgttttgttgttgttt
atttggggggcagtgtttttgttttgttttgattgtgccttgaagtcttg
agatcatgtatgaatatttgaagaaaaaatcatgtatggatgtggagaat
ctgtcacaactctcttgaagacgtgtctgctttactctttggaggtaaaa
ggcttaaaaatcctattctttgtctcagagccacaaagaaagtacaaact
ctgtaagcccctgatttattttctctgagacagtactcaaatgtaagact
tccacaatatcaggatcagtgtgtgtgtgtgtgtgtgtacacgcgcgcac
gcgcaactatggcatgttgtacatacctgcagtatgcacaagatgctagc
tgaggccagggagctagaagagtataacgttgatctctcttgccaatgaa
ccatgccccacccccggaaatgaagtgaggcaggagacaagtatgtctat
aggtgatagtcaaagtcactggctcagtaggtaagagc
gaattctttcaaaattcaagttgcaatatatgaatttaaagtctaaaatt
attttcagagtctggtttctttctatgtatgttaggctgaccttgagcct
agtatagagctggagataatcttgaacttttctggtcccctgcccctatc
cccaaagtgctaagattacaggcgtatatgaccaaacctactttaaggac
cattgactataaggtccaaatttttaaactagtttttttttcctgaaagt
ttaaagaaaacattgaggtcccatttatcaattcttgatcttagagcatg
agccattggagttctatttaggaaatttcccccctgtgacaatgagttct
aggctctttcccactttctcttctattagattcagtgtatctggttttat
gttgaggtccttgatccacttggacttgagctttgtgcaagttgacaaat
atgggtctattttcattcttctacatacagatagccagctagaccagcac
catttattgaagatgccttcttttttccattgtttatttttggcttcttt
gtcaaagatcaagtatctgtaaagttgagaatagtttttgctatacaggt
ttttctgcctttccagatggatttgagaattgctctttccatgtctttga
agaattgtgttgggattttgatggggattgcattgaatctgtagattgcc
ctttggtgggatagccatttttactatgttaattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_156622441_156623034
seq2: B6Ng01-174A12.b_47_640 (reverse)

seq1  GCTCTTACCTACTGAGCCAGTGACTTTGACTATCACCTATAGACATACTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTACCTACTGAGCCAGTGACTTTGACTATCACCTATAGACATACTT  50

seq1  GTCTCCTGCCTCACTTCATTTCCGGGGGTGGGGCATGGTTCATTGGCAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCTGCCTCACTTCATTTCCGGGGGTGGGGCATGGTTCATTGGCAAG  100

seq1  AGAGATCAACGTTATACTCTTCTAGCTCCCTGGCCTCAGCTAGCATCTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATCAACGTTATACTCTTCTAGCTCCCTGGCCTCAGCTAGCATCTTG  150

seq1  TGCATACTGCAGGTATGTACAACATGCCATAGTTGCGCGTGCGCGCGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATACTGCAGGTATGTACAACATGCCATAGTTGCGCGTGCGCGCGTGT  200

seq1  ACACACACACACACACACACTGATCCTGATATTGTGGAAGTCTTACATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACTGATCCTGATATTGTGGAAGTCTTACATTT  250

seq1  GAGTACTGTCTCAGAGAAAATAAATCAGGGGCTTACAGAGTTTGTACTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTACTGTCTCAGAGAAAATAAATCAGGGGCTTACAGAGTTTGTACTTT  300

seq1  CTTTGTGGCTCTGAGACAAAGAATAGGATTTTTAAGCCTTTTACCTCCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTGGCTCTGAGACAAAGAATAGGATTTTTAAGCCTTTTACCTCCAA  350

seq1  AGAGTAAAGCAGACACGTCTTCAAGAGAGTTGTGACAGATTCTCCACATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTAAAGCAGACACGTCTTCAAGAGAGTTGTGACAGATTCTCCACATC  400

seq1  CATACATGATTTTTTCTTCAAATATTCATACATGATCTCAAGACTTCAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACATGATTTTTTCTTCAAATATTCATACATGATCTCAAGACTTCAAG  450

seq1  GCACAATCAAAACAAAACAAAAACACTGCCCCCCAAATAAACAACAACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAATCAAAACAAAACAAAAACACTGCCCCCCAAATAAACAACAACAA  500

seq1  AACAAAACCAAGTTCCAACAATGCCCTGCCTACAATGTCCTTTCTTAGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAACCAAGTTCCAACAATGCCCTGCCTACAATGTCCTTTCTTAGCT  550

seq1  GTTAGGAAAACCATATGCTACAAGACAAGGGATAGAAAGAATTC  594
      | ||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGGAAAACCATATGCTACAAGACAAGGGATAGAAAGAATTC  594

seq1: chrX_156472233_156472965
seq2: B6Ng01-174A12.g_69_802

seq1  GAATTCTTTCAAAATTCAAGTTGCAATATATGAATTTAAAGTCTAAAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCAAAATTCAAGTTGCAATATATGAATTTAAAGTCTAAAATT  50

seq1  ATTTTCAGAGTCTGGTTTCTTTCTATGTATGTTAGGCTGACCTTGAGCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCAGAGTCTGGTTTCTTTCTATGTATGTTAGGCTGACCTTGAGCCT  100

seq1  AGTATAGAGCTGGAGATAATCTTGAACTTTTCTGGTCCCCTGCCCCTATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATAGAGCTGGAGATAATCTTGAACTTTTCTGGTCCCCTGCCCCTATC  150

seq1  CCCAAAGTGCTAAGATTACAGGCGTATATGACCAAACCTACTTTAAGGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAAGTGCTAAGATTACAGGCGTATATGACCAAACCTACTTTAAGGAC  200

seq1  CATTGACTATAAGGTCCAAATTTTTAAACTAGTTTTTTTTTCCTGAAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGACTATAAGGTCCAAATTTTTAAACTAGTTTTTTTTTCCTGAAAGT  250

seq1  TTAAAGAAAACATTGAGGTCCCATTTATCAATTCTTGATCTTAGAGCATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGAAAACATTGAGGTCCCATTTATCAATTCTTGATCTTAGAGCATG  300

seq1  AGCCATTGGAGTTCTATTTAGGAAATTTCCCCCCTGTGACAATGAGTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATTGGAGTTCTATTTAGGAAATTTCCCCCCTGTGACAATGAGTTCT  350

seq1  AGGCTCTTTCCCACTTTCTCTTCTATTAGATTCAGTGTATCTGGTTTTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCTTTCCCACTTTCTCTTCTATTAGATTCAGTGTATCTGGTTTTAT  400

seq1  GTTGAGGTCCTTGATCCACTTGGACTTGAGCTTTGTGCAAGTTGACAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAGGTCCTTGATCCACTTGGACTTGAGCTTTGTGCAAGTTGACAAAT  450

seq1  ATGGGTCTATTTTCATTCTTCTACATACAGATAGCCAGCTAGACCAGCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTCTATTTTCATTCTTCTACATACAGATAGCCAGCTAGACCAGCAC  500

seq1  CATTTATTGAAGATGCCTTCTTTTTTCCATTGTTTATTTTTGGCTTCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTATTGAAGATGCCTTCTTTTTTCCATTGTTTATTTTTGGCTTCTTT  550

seq1  GTCAAAGATCAAGTATCTGTAAAGTTGAGAATAGTTTTTGCTATACAGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAGATCAAGTATCTGTAAAGTTGAGAATAGTTTTTGCTATACAGGT  600

seq1  TTTTCTGCCTTTCCAGATGGATTTGAGAATTGCTCTTTCCATGTCTTTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGCCTTTCCAGATGGATTTGAGAATTGCTCTTTCCATGTCTTTGA  650

seq1  AGAATTGTGTTGGGATTTTGATGGGGATTGCATTGAATCTGTAGATTG-C  699
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AGAATTGTGTTGGGATTTTGATGGGGATTGCATTGAATCTGTAGATTGCC  700

seq1  CTTTGGTGGGATAGCCATTTTTACTATGTTAATT  733
      ||||||||||||||||||||||||||||||||||
seq2  CTTTGGTGGGATAGCCATTTTTACTATGTTAATT  734