BAC Information

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BAC

Clone NameB6Ng01-174F24
ChromosomeX (Build37)
Map Location 24,817,748 - 24,961,037
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100043957, LOC100043206, LOC669000, LOC629204, EG546272, LOC100043216, EG546282, LOC100040417, LOC100040428, LOC100040433, Xmr, LOC100038968
Downstream geneLOC100038977, LOC100038997, LOC664810, EG382275, LOC100039030, LOC100039065, LOC100039078, LOC100039003, Slx
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-174F24.bB6Ng01-174F24.g
ACCGA002472GA002473
length1,158865
definitionB6Ng01-174F24.b B6Ng01-174F24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(24,959,888 - 24,961,037)(24,817,748 - 24,818,291)
sequence
gaattccaaggttcatattgatgtacaaagttatacattgaggtgaatgt
tctgagctggctttggggataagcttgatgtctgagagcttacctgctgc
tgaaaactgtgctgatatatctgatacatgaatgcattttcttttgcaga
ccttgttgtgggtaataatcttgctgctgcaagaagagatttgatgtaat
tgatccctcctgccaccagagaaaatatttatgtccataattgaatcttt
tcaatatcagtgatacacttgtcagcagttaccatactatatctacaatt
cttacctccaatagcaaacatcatattagagatttgtgctgccactttgg
accatgatgatatcagtgattcccaactacctatagtaaaattatgatga
tagccatccatattgctgcatgtaactatgttcatatctatagacagtgc
tgcctctgaagatcttgctaaaatctattagccctactgctagaagactc
tgtcttgaaattcttggtaaatactgttgcctaagtcatgtttacttaag
tgtactgtgttacaatcagttatgattttcatgcctgtgacctgtctgcc
ttctgacatcagtaatcacgacagtgattattgttcctctcaagatatta
ttgggcgcaggaatctatgaaatgtccatgatttatgcatatagcccctg
ctggtttttttaataatttatatgctctttactgcaaccagaagaactga
tcacagtatcatcgatctataatggcaatggagaagacacttatgtttaa
tactattcccaggttctgaatctatgctaatgtcaaagatacacctggaa
acagtaaccatttcttatttaccccaagatctgtgctaccacaggcaacc
ttgatttcagtgacccctgttgcaaatgagtaccatattataatcaataa
ttcaaagtgctgtcagaaagtatttttgatatccataacccaatgatgga
acagcatctatattgaatgtatggtctgtgttgcttctgatgaattgttt
tatattcagggagccctggtggcctcagagtcttattttctgaacctttt
aagttcatacttgcctgcttgaagttcatctgtgaaagttctaagaatat
gttatatt
gaattccatcaaatctccaaactcacaggttatcaatgagtagtctgtgg
ggagcgggtgtggcagcagtcccaaaggcgccagggactgcagctaagtc
atatgacttgcacctgacttcctcatataagacacaaacatcttgagtgc
tgtgcaggtgtaccaggatacaggtgaatccaatttggtggagatttgcc
cctgctgccctgattagctgaagctgcgtgcctggtgaggtggcgtggcc
tgctgtgcgtggatgggaactgagagtataaaagagtgagaggcccaggg
ttcgggggagatataaacaagggagatataaacaagggagagatataaac
aggggagatatagagaaagaagaaacaggactgaataaacgtgtgcagaa
ggatcctgtagcagcgtcgttcttgctggcgagttgggggcgcgcgcaag
agttggtgccgaaacccgggacaagaaacatcttcaggcacgagcgaaga
ccccctgctacagggaggattcagaactgcatcacggggaaggagtggtt
aataaaagttcctgtaaaacagactgttgagaaggatccggcgtggattc
agaactcttcagctggggaacggtactgatgaagagaaagaagaaagatg
aagactgaataaactgttgttagaaggactggtggtcgtgtcgttcttgc
tggtcgagagcagacgtgacaattggtggcccgtactgggaactgactcc
cccaccgagttcagaactttcagcagtcagtggttgccagcagggttagg
ttcacggtgagtgaaactttgcgaccccaggagtttgggaaggacctcgg
ataaattagaggtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_24959888_24961037
seq2: B6Ng01-174F24.b_46_1203 (reverse)

seq1  AATATAACATA-TCTTAGAACACTTCACAAGATG-ACCTCAAGCAG--CA  46
      ||||||||||| |||||||||  ||||| ||||| || ||||||||   |
seq2  AATATAACATATTCTTAGAAC-TTTCAC-AGATGAACTTCAAGCAGGCAA  48

seq1  GTATTGACTTTAAA-GTTCAGAA---TAGACTCTGGTGGCCA-CAGGGCT  91
      ||||  |||| ||| ||||||||    ||||||| | ||||| |||||||
seq2  GTATGAACTTAAAAGGTTCAGAAAATAAGACTCT-GAGGCCACCAGGGCT  97

seq1  CCTTG-ATAT-AAACAATTCCATCAGAAGCAACACAGACCATACATTTCA  139
      || || |||| |||||||| ||||||||||||||||||||||||| ||||
seq2  CCCTGAATATAAAACAATT-CATCAGAAGCAACACAGACCATACA-TTCA  145

seq1  ATATAGATGCTTGTTCCATCATT-GGTTATGGATATC-AAAATACTTTCT  187
      |||||||||| |||||||||||| ||||||||||||| ||||||||||||
seq2  ATATAGATGC-TGTTCCATCATTGGGTTATGGATATCAAAAATACTTTCT  194

seq1  GACAGCACTTTGAATTATTGATTATAATATGGTACTCATTTGCAACAGGG  237
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCACTTTGAATTATTGATTATAATATGGTACTCATTTGCAACAGGG  244

seq1  GTCACTGAAATCAAGGTTGCCTGTGGTAGCACAGATCTTGGGGTAAATAA  287
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACTGAAATCAAGGTTGCCTGTGGTAGCACAGATCTTGGGGTAAATAA  294

seq1  GAAATGGTTACTGTTTCCAGGTGTATCTTTGACATTAGCATAGATTCAGA  337
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGGTTACTGTTTCCAGGTGTATCTTTGACATTAGCATAGATTCAGA  344

seq1  ACCTGGGAATAGTATT-AACATAAGTGTCTTCTCCATTGCCATTATAGAT  386
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  ACCTGGGAATAGTATTAAACATAAGTGTCTTCTCCATTGCCATTATAGAT  394

seq1  CGATGATACTGTGATCAGTTCTTCTGGTTGCAGTAAAGAGCATATAAATT  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATGATACTGTGATCAGTTCTTCTGGTTGCAGTAAAGAGCATATAAATT  444

seq1  ATTAAAAAAACCAGCAGGGGCTATATGCATAAATCATGGACATTTCATAG  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAAAAACCAGCAGGGGCTATATGCATAAATCATGGACATTTCATAG  494

seq1  ATTCCTGCGCCCAATAATATCTTGAGAGGAACAATAATCACTGTCGTGAT  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTGCGCCCAATAATATCTTGAGAGGAACAATAATCACTGTCGTGAT  544

seq1  TACTGATGTCAGAAGGCAGACAGGTCACAGGCATGAAAATCATAACTGAT  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGATGTCAGAAGGCAGACAGGTCACAGGCATGAAAATCATAACTGAT  594

seq1  TGTAACACAGTACACTTAAGTAAACATGACTTAGGCAACAGTATTTACCA  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACACAGTACACTTAAGTAAACATGACTTAGGCAACAGTATTTACCA  644

seq1  AGAATTTCAAGACAGAGTCTTCTAGCAGTAGGGCTAATAGATTTTAGCAA  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTCAAGACAGAGTCTTCTAGCAGTAGGGCTAATAGATTTTAGCAA  694

seq1  GATCTTCAGAGGCAGCACTGTCTATAGATATGAACATAGTTACATGCAGC  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTCAGAGGCAGCACTGTCTATAGATATGAACATAGTTACATGCAGC  744

seq1  AATATGGATGGCTATCATCATAATTTTACTATAGGTAGTTGGGAATCACT  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGGATGGCTATCATCATAATTTTACTATAGGTAGTTGGGAATCACT  794

seq1  GATATCATCATGGTCCAAAGTGGCAGCACAAATCTCTAATATGATGTTTG  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATCATCATGGTCCAAAGTGGCAGCACAAATCTCTAATATGATGTTTG  844

seq1  CTATTGGAGGTAAGAATTGTAGATATAGTATGGTAACTGCTGACAAGTGT  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTGGAGGTAAGAATTGTAGATATAGTATGGTAACTGCTGACAAGTGT  894

seq1  ATCACTGATATTGAAAAGATTCAATTATGGACATAAATATTTTCTCTGGT  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTGATATTGAAAAGATTCAATTATGGACATAAATATTTTCTCTGGT  944

seq1  GGCAGGAGGGATCAATTACATCAAATCTCTTCTTGCAGCAGCAAGATTAT  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGAGGGATCAATTACATCAAATCTCTTCTTGCAGCAGCAAGATTAT  994

seq1  TACCCACAACAAGGTCTGCAAAAGAAAATGCATTCATGTATCAGATATAT  1036
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCACAACAAGGTCTGCAAAAGAAAATGCATTCATGTATCAGATATAT  1044

seq1  CAGCACAGTTTTCAGCAGCAGGTAAGCTCTCAGACATCAAGCTTATCCCC  1086
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACAGTTTTCAGCAGCAGGTAAGCTCTCAGACATCAAGCTTATCCCC  1094

seq1  AAAGCCAGCTCAGAACATTCACCTCAATGTATAACTTTGTACATCAATAT  1136
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCAGCTCAGAACATTCACCTCAATGTATAACTTTGTACATCAATAT  1144

seq1  GAACCTTGGAATTC  1150
      ||||||||||||||
seq2  GAACCTTGGAATTC  1158

seq1: chrX_24817748_24818291
seq2: B6Ng01-174F24.g_67_610

seq1  GAATTCCATCAAATCTCCAAACTCACAGGTTATCAATGAGTAGTCTGTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCAAATCTCCAAACTCACAGGTTATCAATGAGTAGTCTGTGG  50

seq1  GGAGCGGGTGTGGCAGCAGTCCCAAAGGCGCCAGGGACTGCAGCTAAGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCGGGTGTGGCAGCAGTCCCAAAGGCGCCAGGGACTGCAGCTAAGTC  100

seq1  ATATGACTTGCACCTGACTTCCTCATATAAGACACAAACATCTTGAGTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGACTTGCACCTGACTTCCTCATATAAGACACAAACATCTTGAGTGC  150

seq1  TGTGCAGGTGTACCAGGATACAGGTGAATCCAATTTGGTGGAGATTTGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCAGGTGTACCAGGATACAGGTGAATCCAATTTGGTGGAGATTTGCC  200

seq1  CCTGCTGCCCTGATTAGCTGAAGCTGCGTGCCTGGTGAGGTGGCGTGGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTGCCCTGATTAGCTGAAGCTGCGTGCCTGGTGAGGTGGCGTGGCC  250

seq1  TGCTGTGCGTGGATGGGAACTGAGAGTATAAAAGAGTGAGAGGCCCAGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTGCGTGGATGGGAACTGAGAGTATAAAAGAGTGAGAGGCCCAGGG  300

seq1  TTCGGGGGAGATATAAACAAGGGAGATATAAACAAGGGAGAGATATAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGGGGGAGATATAAACAAGGGAGATATAAACAAGGGAGAGATATAAAC  350

seq1  AGGGGAGATATAGAGAAAGAAGAAACAGGACTGAATAAACGTGTGCAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAGATATAGAGAAAGAAGAAACAGGACTGAATAAACGTGTGCAGAA  400

seq1  GGATCCTGTAGCAGCGTCGTTCTTGCTGGCGAGTTGGGGGCGCGCGCAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCCTGTAGCAGCGTCGTTCTTGCTGGCGAGTTGGGGGCGCGCGCAAG  450

seq1  AGTTGGTGCCGAAACCCGGGACAAGAAACATCTTCAGGCACGAGCGAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGTGCCGAAACCCGGGACAAGAAACATCTTCAGGCACGAGCGAAGA  500

seq1  CCCCCTGCTACAGGGAGGATTCAGAACTGCATCACGGGGAAGGA  544
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTGCTACAGGGAGGATTCAGAACTGCATCACGGGGAAGGA  544