BAC Information

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BAC

Clone NameB6Ng01-176I04
ChromosomeX (Build37)
Map Location 96,675,653 - 96,834,590
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100042324, Ophn1, Yipf6, LOC100042932, Stard8, LOC436219, Efnb1, Pja1
Downstream geneLOC100042947, Pcna-ps1, EG620592, Eda, Dgat2l4, Otud6a, Igbp1, LOC668257, Dgat2l3, LOC620734, P2ry4, Arr3, Pdzd11, Kif4
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-176I04.bB6Ng01-176I04.g
ACCGA004027GA004028
length2611,124
definitionB6Ng01-176I04.b B6Ng01-176I04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(96,834,330 - 96,834,590)(96,675,653 - 96,676,784)
sequence
ttctaggagtaagatatgccccccagaaacagcaattccagccacatatt
ggctctggaatgtgatatattggaatgtcactgcccatgaacttgggcag
gctggttttactctctttctgaagataccattctccacctacctcagaag
ttagactgagtatgaaatggggggggggggggcgacacatggaaagatct
cactgagaccttaccgttactggtggttcctgttatcacagtctattcgg
aattgtccact

gaattccactgaagcaggaggtgctggagtttcttcacaagactgctaag
ctaggtatagtggtgagatacatgcctctatttcctggcagtcaggagac
agaagccgggcaatcatcgcatgttcaagatcagccagggctatgcgtac
atggtcaattccaagccaaccagagttagtaacaccacagaaaataaaag
caggccaataatcctgcttgctatgccaccctgaacaaatcttttttaac
gccctctatccacagtgttcccatcagcacagtacgtttggatctaaatg
ccttctaagaaatctggcagtgtttgtattccagaaccttctataagaat
gctctgagtttgtgctttagacagtgacagttgtttttctgtactaatgg
actgtgggagtcagaataaccttggaagcgagcactaaaagcaccctgga
aaccaaggccggcagctcattgttctgatctagatacttgctttgagtgg
taccgtccctatttcccagctttctctctccctacctctagcatacctcc
ccacctgggttccagagacctccttgctctgcctgggacatagctatctc
cctcctgcatctagcaccttcacagaagtgaacatagttatctcccttgt
gcatctagcaccttcacagaagtgactccgcagactggcaatgcagctct
tctacctctttgctgaccagttccttttgtgcttgctctcagtgctggcc
agtgaacccaggtcctcaggaatgctaaacaagtactctaccgctaagct
ctctttgtagtttttttttttttttttctaagagaacagatttattctct
tttttttttttaattccgagacagggttttgctatgttcctggagttggc
cttggattcattctgtagcccacgtagacctagacttttgaatttctgac
cctcttgctcagtctcccttagcagctgcgattcagccctttgcaagcct
ttcctttgattcttaactgaaatgaccacgtcttccctgcattaggtcta
tggtctagtctacttcactactcttggtggttataaccccaactcaaatg
tgaaatgcatgccatgtaaatatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_96834330_96834590
seq2: B6Ng01-176I04.b_47_307 (reverse)

seq1  AGTGGACACTTCCGAATAGACTGTGATGACTGGTACCACCAGTAACAGTA  50
      |||||||| |||||||||||||||||| || || |||||||||||| |||
seq2  AGTGGACAATTCCGAATAGACTGTGATAACAGGAACCACCAGTAACGGTA  50

seq1  AGGTCTCAGTGACATCTTTCCATGTGTCGCCCCCCCCCCCCCCATTTCAT  100
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AGGTCTCAGTGAGATCTTTCCATGTGTCGCCCCCCCCCCCCCCATTTCAT  100

seq1  ACTCAGTCTAACTTCTGAGGTAGGTGGAGAATGGTATCTTCAGAAAGAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGTCTAACTTCTGAGGTAGGTGGAGAATGGTATCTTCAGAAAGAGA  150

seq1  GTAAAACCAGCCTGCCCAAGTTCATGGGCAGTGACATTCCAATATATCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAACCAGCCTGCCCAAGTTCATGGGCAGTGACATTCCAATATATCAC  200

seq1  ATTCCAGAGCCAATATGTGGCTGGAATTGCTGTTTCTGGGGGGCATATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCAGAGCCAATATGTGGCTGGAATTGCTGTTTCTGGGGGGCATATCT  250

seq1  TACTCCTAGAA  261
      |||||||||||
seq2  TACTCCTAGAA  261


seq1: chrX_96675653_96676784
seq2: B6Ng01-176I04.g_64_1187

seq1  GAATTCCACTGAAGCAGGAGGTGCTGGAGTTTCTTCACAAGACTGCTAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACTGAAGCAGGAGGTGCTGGAGTTTCTTCACAAGACTGCTAAG  50

seq1  CTAGGTATAGTGGTGAGATACATGCCTCTATTTCCTGGCAGTCAGGAGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGTATAGTGGTGAGATACATGCCTCTATTTCCTGGCAGTCAGGAGAC  100

seq1  AGAAGCCGGGCAATCATCGCATGTTCAAGATCAGCCAGGGCTATGCGTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCCGGGCAATCATCGCATGTTCAAGATCAGCCAGGGCTATGCGTAC  150

seq1  ATGGTCAATTCCAAGCCAACCAGAGTTAGTAACACCACAGAAAATAAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTCAATTCCAAGCCAACCAGAGTTAGTAACACCACAGAAAATAAAAG  200

seq1  CAGGCCAATAATCCTGCTTGCTATGCCACCCTGAACAAATCTTTTTTAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCAATAATCCTGCTTGCTATGCCACCCTGAACAAATCTTTTTTAAC  250

seq1  GCCCTCTATCCACAGTGTTCCCATCAGCACAGTACGTTTGGATCTAAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTCTATCCACAGTGTTCCCATCAGCACAGTACGTTTGGATCTAAATG  300

seq1  CCTTCTAAGAAATCTGGCAGTGTTTGTATTCCAGAACCTTCTATAAGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTAAGAAATCTGGCAGTGTTTGTATTCCAGAACCTTCTATAAGAAT  350

seq1  GCTCTGAGTTTGTGCTTTAGACAGTGACAGTTGTTTTTCTGTACTAATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGAGTTTGTGCTTTAGACAGTGACAGTTGTTTTTCTGTACTAATGG  400

seq1  ACTGTGGGAGTCAGAATAACCTTGGAAGCGAGCACTAAAAGCACCCTGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGGGAGTCAGAATAACCTTGGAAGCGAGCACTAAAAGCACCCTGGA  450

seq1  AACCAAGGCCGGCAGCTCATTGTTCTGATCTAGATACTTGCTTTGAGTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAGGCCGGCAGCTCATTGTTCTGATCTAGATACTTGCTTTGAGTGG  500

seq1  TACCGTCCCTATTTCCCAGCTTTCTCTCTCCCTACCTCTAGCATACCTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCGTCCCTATTTCCCAGCTTTCTCTCTCCCTACCTCTAGCATACCTCC  550

seq1  CCACCTGGGTTCCAGAGACCTCCTTGCTCTGCCTGGGACATAGCTATCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTGGGTTCCAGAGACCTCCTTGCTCTGCCTGGGACATAGCTATCTC  600

seq1  CCTCCTGCATCTAGCACCTTCACAGAAGTGAACATAGTTATCTCCCTTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTGCATCTAGCACCTTCACAGAAGTGAACATAGTTATCTCCCTTGT  650

seq1  GCATCTAGCACCTTCACAGAAGTGACTCCGCAGACTGGCAATGCAGCTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTAGCACCTTCACAGAAGTGACTCCGCAGACTGGCAATGCAGCTCT  700

seq1  TCTACCTCTTTGCTGACCAGTTCCTTTTGTGCTTGCTCTCAGTGCTGGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCTCTTTGCTGACCAGTTCCTTTTGTGCTTGCTCTCAGTGCTGGCC  750

seq1  AGTGAACCCAGGTCCTCAGGAATGCTAAACAAGTACTCTACCGCTAAGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAACCCAGGTCCTCAGGAATGCTAAACAAGTACTCTACCGCTAAGCT  800

seq1  CTCTTTGTAG--TTTTTTTTTTTTTTTCTAAGAGAACAGATTTATTCTTT  848
      ||||||||||  |||||||||||||||||||||||||||||||||||   
seq2  CTCTTTGTAGTTTTTTTTTTTTTTTTTCTAAGAGAACAGATTTATTC---  847

seq1  TTTTTTTTTTTTTTTTTATTCCGAGACAGGGTTTTGCTATGTTCCTGAGG  898
        | |||||||||||| ||||||||||||||||||||||||||||||  |
seq2  --TCTTTTTTTTTTTTAATTCCGAGACAGGGTTTTGCTATGTTCCTGGAG  895

seq1  TTGGCCTTGGATTCATTCTGTAGCCCACGTAGA-CTAGAC-TTTGAATTT  946
      ||||||||||||||||||||||||||||||||| |||||| |||||||||
seq2  TTGGCCTTGGATTCATTCTGTAGCCCACGTAGACCTAGACTTTTGAATTT  945

seq1  CTGACCCTCTTGCCTCAGTCTCCC-TAGCAGCTGCGATTCCAGCCCTATG  995
      |||||||||||| ||||||||||| |||||||||||||| ||||||| ||
seq2  CTGACCCTCTTG-CTCAGTCTCCCTTAGCAGCTGCGATT-CAGCCCTTTG  993

seq1  CCAGCCTTTCCCTTTTGA-TCTTAACTGAAATGACCCACGTCTTCCCTGG  1044
      | |||||||||  ||||| ||||||||||||||| |||||||||||||| 
seq2  CAAGCCTTTCC--TTTGATTCTTAACTGAAATGA-CCACGTCTTCCCTG-  1039

seq1  CCATTA-GTCTAT-GTCTAGTCATACTCACCTACTC-TGGTGGGTTTATA  1091
       ||||| |||||| |||||||| ||||   |||||| ||||||  |||||
seq2  -CATTAGGTCTATGGTCTAGTC-TACTTCACTACTCTTGGTGG--TTATA  1085

seq1  ACACCCATCACAATGGTAGAAATGCATGCCATGTAAATATC  1132
      || |||| | |||  || |||||||||||||||||||||||
seq2  AC-CCCAACTCAAATGT-GAAATGCATGCCATGTAAATATC  1124


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