BAC Information

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BAC

Clone NameB6Ng01-176L01
ChromosomeX (Build37)
Map Location 91,916,803 - 91,917,822
singlet/doubletsinglet
Overlap geneLOC385500
Upstream genePcyt1b, Pdk3, EG668103, LOC100042041, AU015836, EG245516, LOC100042062, EG629591, Zfx, Eif2s3x, Klhl15, LOC385495, LOC670263, LOC100042098, LOC631145, 0610008C08Rik, EG668148, Maged1, LOC668150, EG385499, EG668156, Gspt2
Downstream geneZxdb, LOC631331, EG631319, Zxda, Gm371, 9630042H07Rik, Arhgef9, LOC619688, LOC100042189, 2810002O09Rik, Asb12, LOC668202, AK129302, A130028J20Rik
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-176L01.bB6Ng01-176L01.g
ACCGA004163GA004164
length8291,027
definitionB6Ng01-176L01.b B6Ng01-176L01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaataagtacttgaaacataaccacagggatattgtgttttctg
gattgcttactggcttatgcgtatatacagcccaggagtacctgtccagg
gaataatgctacccatactgggctgccccctcctacataaattctcaatc
aagacaatataacagatattcccacaggccaatctggactatccctcaat
tgagatcaccttctcagatgactctaagatgtgttaagttactaggataa
cctctaaaaccacatgaccctggtctctaatgtcagtgtttcttcaagca
tcaccatctttcaatattctaccagaattactcattgagttgtgcttctg
gaattcaagggtttttctatcccaaagttttatagtctcctatatcctcc
ctgaaactagtttcaaatgcctatggaccgatagcaatagtcccacccct
cattaccaacttctgcattagtttatttttatctttttgtgataaaatac
ctccacaaagacaacatgacaaagggtttattctaggtcacacttcaagg
atacagcccatcatgacatggaagtcaatgtggcagaaacttaagcattg
tgtcatattgcacccatagtcaggaagcagagaaaaggatcaatacatct
tactgtttaactccccttctctacttgtacagtccaggagcccaaccaag
gaatggcaccacccacagcatgaggatcttcccacctcaattaatccaat
caaattaattctccatgacatctatctcacaagtagttatagacttgtca
agttgtatttttctgagtaaagtgaaaat

gaattcaaatggacactttaaagaccaaaggctgggtggaggtgcagaac
catggcgtcagaacaacccattttgttcccaaacagtatagagttgttga
aacaagagaacctgtctgttcaatgagaagtgaaaagctgatacagagaa
ggtggtggtgggactccgatttgaaaaggaatgcacaaaaggacaccaaa
tggagcctgatctgtcagaagtgtctgcctgacttcgcctgggaagtgga
agcaatggcttactcagaaggaaaatatcagtgcttgagccaaaggaaaa
gaacttcccaagcaaagagaaggacagaagaacagaagatctctttgaac
ttacagaggacatggaaaaggaaatcagtaatgccctgggccacggccca
ccagatgagattttgagcagcgctttcaagttgtgaatcacccgaggaga
tatccagaccttaaagaactatcactggctcgatgatgaggtcattcatt
tttatatgaatcttttagtggaaaggggtaaaaagcaaggctatccagca
cttcacgcattcagtacattcttctatcttaagctaaagtctggaggtta
ccaagcagtgacaagatggaccaaagctgtgaatctcttcgaacaagaac
ttgttctggtacctattcatcggaaggtacattggtgcctagtagtgatg
gacctaagaaaaaagtgtcttaaatatctggatgctatgggacaaaaagg
ccatgggatctatgagattcttaccaaaagaaatacagatctcaacctct
tagagtggactacagcatgaagccacatgagattcctcaacagttgaatg
ggagtggtttgtggaaggtttacttgttaaatatgcagattatattttct
tagggaacaaacctatcatattcgctcagcaccagatgcctctctccgga
tggagaccggtgtgggaaaatcgttcaccagcagttgctggtgacaatgc
ccgtctggttattctagctgctggtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_91916803_91917822
seq2: B6Ng01-176L01.g_63_1089 (reverse)

seq1  CCACCAGCAGCTAGAA-GACCAGACGGGGCATTGTCA-CAGCAACTGCTG  48
      ||||||||||||||||  ||||||| ||||||||||| ||||||||||||
seq2  CCACCAGCAGCTAGAATAACCAGAC-GGGCATTGTCACCAGCAACTGCTG  49

seq1  GTGAACGA-TTTCCCACACC-GTCTCCATCCGGAAGAGAGGCATCTGGTG  96
      |||||||| ||||||||||| |||||||||||| ||||||||||||||||
seq2  GTGAACGATTTTCCCACACCGGTCTCCATCCGG-AGAGAGGCATCTGGTG  98

seq1  CTGAGCGAATATGATAGGTTTG-TCCCTA--GAAATATAATCTGCATATT  143
      |||||||||||||||||||||| ||||||   ||||||||||||||||||
seq2  CTGAGCGAATATGATAGGTTTGTTCCCTAAGAAAATATAATCTGCATATT  148

seq1  T-ACAAGTAAACCTTCCAC-AACCACTCCCATTCAACTGTTGAGGAATCT  191
      | ||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TAACAAGTAAACCTTCCACAAACCACTCCCATTCAACTGTTGAGGAATCT  198

seq1  CATGTGGCTTCATGCTGTAGTCCACTCTAAGAGGTTGAGATCTGTATTTC  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGGCTTCATGCTGTAGTCCACTCTAAGAGGTTGAGATCTGTATTTC  248

seq1  TTTTGGTAAGAATCTCATAGATCCCATGGCCTTTTTGTCCCATAGCATCC  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGTAAGAATCTCATAGATCCCATGGCCTTTTTGTCCCATAGCATCC  298

seq1  AGATATTTAAGACACTTTTTTCTTAGGTCCATCACTACTAGGCACCAATG  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATTTAAGACACTTTTTTCTTAGGTCCATCACTACTAGGCACCAATG  348

seq1  TACCTTCCGATGAATAGGTACCAGAACAAGTTCTTGTTCGAAGAGATTCA  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTCCGATGAATAGGTACCAGAACAAGTTCTTGTTCGAAGAGATTCA  398

seq1  CAGCTTTGGTCCATCTTGTCACTGCTTGGTAACCTCCAGACTTTAGCTTA  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTTGGTCCATCTTGTCACTGCTTGGTAACCTCCAGACTTTAGCTTA  448

seq1  AGATAGAAGAATGTACTGAATGCGTGAAGTGCTGGATAGCCTTGCTTTTT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGAAGAATGTACTGAATGCGTGAAGTGCTGGATAGCCTTGCTTTTT  498

seq1  ACCCCTTTCCACTAAAAGATTCATATAAAAATGAATGACCTCATCATCGA  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTTTCCACTAAAAGATTCATATAAAAATGAATGACCTCATCATCGA  548

seq1  GCCAGTGATAGTTCTTTAAGGTCTGGATATCTCCTCGGGTGATTCACAAC  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTGATAGTTCTTTAAGGTCTGGATATCTCCTCGGGTGATTCACAAC  598

seq1  TTGAAAGCGCTGCTCAAAATCTCATCTGGTGGGCCGTGGCCCAGGGCATT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAGCGCTGCTCAAAATCTCATCTGGTGGGCCGTGGCCCAGGGCATT  648

seq1  ACTGATTTCCTTTTCCATGTCCTCTGTAAGTTCAAAGAGATCTTCTGTTC  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATTTCCTTTTCCATGTCCTCTGTAAGTTCAAAGAGATCTTCTGTTC  698

seq1  TTCTGTCCTTCTCTTTGCTTGGGAAGTTCTTTTCCTTTGGCTCAAGCACT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTCCTTCTCTTTGCTTGGGAAGTTCTTTTCCTTTGGCTCAAGCACT  748

seq1  GATATTTTCCTTCTGAGTAAGCCATTGCTTCCACTTCCCAGGCGAAGTCA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTTTCCTTCTGAGTAAGCCATTGCTTCCACTTCCCAGGCGAAGTCA  798

seq1  GGCAGACACTTCTGACAGATCAGGCTCCATTTGGTGTCCTTTTGTGCATT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGACACTTCTGACAGATCAGGCTCCATTTGGTGTCCTTTTGTGCATT  848

seq1  CCTTTTCAAATCGGAGTCCCACCACCACCTTCTCTGTATCAGCTTTTCAC  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTCAAATCGGAGTCCCACCACCACCTTCTCTGTATCAGCTTTTCAC  898

seq1  TTCTCATTGAACAGACAGGTTCTCTTGTTTCAACAACTCTATACTGTTTG  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCATTGAACAGACAGGTTCTCTTGTTTCAACAACTCTATACTGTTTG  948

seq1  GGAACAAAATGGGTTGTTCTGACGCCATGGTTCTGCACCTCCACCCAGCC  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACAAAATGGGTTGTTCTGACGCCATGGTTCTGCACCTCCACCCAGCC  998

seq1  TTTGGTCTTTAAAGTGTCCATTTGAATTC  1020
      |||||||||||||||||||||||||||||
seq2  TTTGGTCTTTAAAGTGTCCATTTGAATTC  1027


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