BAC Information

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BAC

Clone NameB6Ng01-178H22
ChromosomeX (Build37)
Map Location 27,454,839 - 27,455,876
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042154, EG664861, LOC664866, LOC100042175, LOC100039194, LOC100039208, EG664877, LOC664881, LOC100039240, LOC100039248, LOC100039073, EG664890
Downstream geneLOC664898, LOC22526, EG664906, LOC664917, LOC100039324, LOC100039334, LOC100039096, EG664923, LOC100039364, LOC100039377, LOC100039386, LOC100039127, EG664944
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-178H22.bB6Ng01-178H22.g
ACCGA005466GA005467
length1,0371,207
definitionB6Ng01-178H22.b B6Ng01-178H22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattgacagaaagtatatttgtttcttgaaacaaactagactgct
aactgtgaggcaggataaaagaactgattagccccatctcactgttccag
gcccagccccttctctctgttcccattgttcttgtttctgagctctctgt
ctctgtctttgttctcagcttcccctctatctgttctctgccctactttt
tctgaccgaatgactttgcttcttctgtctgtctgcctctatcccttccc
cagttcctcactcttctcccctcccccaataaatccattttataccaggt
ctgttgcatggtataatttctcaggggcacaccttgcatgagcccaccaa
aggtactcccttgccatgttatatttcataacactaacacattaaatgca
actgacaaaatctataaatattagtttgagacatggatttttttattctc
ataaaggcattaaaacatcatttcattgtgcttggccttcagataaatga
cacctaaccttacctaatgcttaagaatgcttcacatgctcttccgctcg
actcgagactcgagccccgggctaccttgccagcagagtcttgcccaaca
cccgcaagggcccacacgggactccccacgggaccctaagacctctggtg
agtggaccacagtgcctgccccaatccaatcgcgcggaacttgagactgc
ggtacatagggaagcaggctacccgggcctgatctggggcacaagtccct
tccgctcgactcgagactcgagccccgggctaccttgccagcagagtctt
gcccaacacccgcaagggtccacacgggactccccacgggaccctaagac
ctctggtgagtggatcacagtgcctgccccaatccaatcgcgcggaactt
gagacttcggtacatagggaagcaggctacccgggcctgatctggggcac
aagtcccttccgctcgactcgagactcgagccccggctaccttgccagca
gagtcttgcccacacccgcaggttccacacgggactc
gaattctcacctgaggaataccgaatggctgagaagcacctgaaaaaatg
ttcagcatccttaatcatcagagaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcaaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggtggttcctca
gaaaattggacatattactaccagagaatcctgcaatacctcttctggac
atatatccagaagatgttccaaccggtgagaaggacacatgctcccctat
gttcatagcaggattatttataatacccagaagctggaaaggacccagat
gtccctcaatagaggaatggataaaaaaatttggtacatttacataatgg
agtactactaagctattaaaaggaatgaatttatgaaattggtaggcaaa
tggttggaactggagggcattatcctgagtgaggtaacacaatcacaaaa
gaactcacatgatatgtactcactgataagtggatattagcccagaaact
tagtatagcctagatgtgagatacaatttgcaaaaacatgaaactgaaga
agaatgaagaccaaagtgtggacactttgctccttcttagaattgggaat
aatcgcccatggaaggagttacagagacaaagtttggagcagagacgaaa
ggatggaccatctagagactgccatatccagggatccaccccataatgtg
cctccaaacgatgacaccaatgcatacactagtaagcgtttgctgaaagg
aacctgatatagctgtctcttgtgagactaggctgcggcctagcaaacac
agaagtggatgctcacagtcagctattggatggatcacagggcccccaat
ggaggagctagagaaagtatttcaaggagcttatagagatctgcaaccct
tgtaggtgcacacattatggactagtagtttccctggtagctcttgactc
tagcttgcatttgtatcaaaagatgggccctagtcgggcccgttcacctg
gtaagtcccattggacactgcaactttattatttccttaggacaggtatc
gcaggaccaaatctgggatggggtgtgtcagtgaggtgagcttacactaa
tatgaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_27454839_27455876
seq2: B6Ng01-178H22.b_46_1080

seq1  GAATTCATTGACAGAAAGTATATTTGTTTCTTGAAACAAACTAGACTGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGACAGAAAGTATATTTGTTTCTTGAAACAAACTAGACTGCT  50

seq1  AACTGTGAGGCAGGATAAAAGAACTGATTAGCCCCATCTCACTGTTCCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTGAGGCAGGATAAAAGAACTGATTAGCCCCATCTCACTGTTCCAG  100

seq1  GCCCAGCCCCTTCTCTCTGTTCCCATTGTTCTTGTTTCTGAGCTCTCTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGCCCCTTCTCTCTGTTCCCATTGTTCTTGTTTCTGAGCTCTCTGT  150

seq1  CTCTGTCTTTGTTCTCAGCTTCCCCTCTATCTGTTCTCTGCCCTACTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTCTTTGTTCTCAGCTTCCCCTCTATCTGTTCTCTGCCCTACTTTT  200

seq1  TCTGACCGAATGACTTTGCTTCTTCTGTCTGTCTGCCTCTATCCCTTCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACCGAATGACTTTGCTTCTTCTGTCTGTCTGCCTCTATCCCTTCCC  250

seq1  CAGTTCCTCACTCTTCTCCCCTCCCCCAATAAATCCATTTTATACCAGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCCTCACTCTTCTCCCCTCCCCCAATAAATCCATTTTATACCAGGT  300

seq1  CTGTTGCATGGTATAATTTCTCAGGGGCACACCTTGCATGAGCCCACCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGCATGGTATAATTTCTCAGGGGCACACCTTGCATGAGCCCACCAA  350

seq1  AGGTACTCCCTTGCCATGTTATATTTCATAACACTAACACATTAAATGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTACTCCCTTGCCATGTTATATTTCATAACACTAACACATTAAATGCA  400

seq1  ACTGACAAAATCTATAAATATTAGTTTGAGACATGGATTTTTTTATTCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGACAAAATCTATAAATATTAGTTTGAGACATGGATTTTTTTATTCTC  450

seq1  ATAAAGGCATCAAAACATCATTTCATTGTGCTTGGCCTTCAGATAAATGA  500
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGGCATTAAAACATCATTTCATTGTGCTTGGCCTTCAGATAAATGA  500

seq1  CACCTAACCTTACCTAATGCTTAAGAATGCTTCACATGCTCTTCCGCTCG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTAACCTTACCTAATGCTTAAGAATGCTTCACATGCTCTTCCGCTCG  550

seq1  ACTCGAGACTCGAGCCCCGGGCTACCTTGCCAGCAGAGTCTTGCCCAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCGAGACTCGAGCCCCGGGCTACCTTGCCAGCAGAGTCTTGCCCAACA  600

seq1  CCCGCAAGGGCCCACACGGGACTCCCCACGGGACCCTAAGACCTCTGGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGCAAGGGCCCACACGGGACTCCCCACGGGACCCTAAGACCTCTGGTG  650

seq1  AGTGGACCACAGTGCCTGCCCAAATCCAATCGCGCGGAACTTGAGACTGC  700
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AGTGGACCACAGTGCCTGCCCCAATCCAATCGCGCGGAACTTGAGACTGC  700

seq1  GGTACATAGGGAAGCAGGCTACCCGGGCCTGATCTGGGGCACAAGTCCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACATAGGGAAGCAGGCTACCCGGGCCTGATCTGGGGCACAAGTCCCT  750

seq1  TCCGCTCGACTCGAGACTCGAGCCCCGGGCTACCTTGCCAGCAGAGTCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGCTCGACTCGAGACTCGAGCCCCGGGCTACCTTGCCAGCAGAGTCTT  800

seq1  GCCCAACACCCGCAAGGGTCCACACGGGACTCCCCACGGGACCCTAAGAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAACACCCGCAAGGGTCCACACGGGACTCCCCACGGGACCCTAAGAC  850

seq1  CTCTGGTGAGTGGATCACAGTGCCTGCCCCAATCCAATCGCGCGGAACTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGTGAGTGGATCACAGTGCCTGCCCCAATCCAATCGCGCGGAACTT  900

seq1  GAGACTTCGGTACATAGGGAAGCAGGCTACCCGGGCCTGATCTGGGGCAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTTCGGTACATAGGGAAGCAGGCTACCCGGGCCTGATCTGGGGCAC  950

seq1  AAGTCCCTTCCGCTCGACTCGAGACTCGAGCCCCGGGCTACCTTGCCAGC  1000
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AAGTCCCTTCCGCTCGACTCGAGACTCGAGCCCC-GGCTACCTTGCCAGC  999

seq1  AGAGTCTTGCCCAACACCCGCAAGGGTCCACACGGGAC  1038
      |||||||||||| |||||||| ||| ||||||||||||
seq2  AGAGTCTTGCCC-ACACCCGC-AGGTTCCACACGGGAC  1035