BAC Information

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BAC

Clone NameB6Ng01-179J06
ChromosomeX (Build37)
Map Location 60,360,403 - 60,361,538
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC385367, LOC671741, 4933402E13Rik, 4931400O07Rik, 1700019B21Rik, LOC671878, LOC666695, EG627420
Downstream geneLOC666729
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-179J06.bB6Ng01-179J06.g
ACCGA006261GA006262
length1,144436
definitionB6Ng01-179J06.b B6Ng01-179J06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttgcagcatacttgaatatataacaattaaaggtgcaagtaggt
gtcttgaactaccaccggtgattagcaagtcccttaatattaggtcatat
aaatcttgatattcttatataaaatgagatatattgtgtaaaatcttcca
tttatatacatttatcaatactgtataaatgcaaatgagctaatttgtat
tcagaatcaggtaggcagaaacatctatagtatgtatgctaagtgggatt
ctaattcagctcccattttccccctctctgaattagtcagtgaaacagtt
accaatttttctatacttatttattttcagcataaaatggaagctggcag
gaaagtttaggcaaacttcagacacagggtagcaaatttcatccaaatac
atagcagaaataggggcttattcctctgtcctcaagtaatgtgttagcct
taagatgaataatctgggaagtgatttcttctgtttaattctctatgaaa
catgctatatgcagtggaaggtgtgaagcagaagactgaatagatacctc
ttgtactagtgacatagagagctaggacataacttactaggatagtttta
aatcacaaagatagtaaaaattattttgtaaaataaaattaacctgctgt
agaatttattttcagatgacatttctgaaagaaataattccaaacattat
cctattgtatttgtgagaaattcaatgatagtgataatgttatacttgta
gctactttttgagtaggtatagtagttgtgaggtagagatactttactag
aagacagaaccattctcattcttccattgttttaatctgtgcagcattat
atgggattatcacattctctatggagatcaggaatagaggtttgcagagt
tccttttagatttggcatctcaagaaatttatgtgttatttcaaaacctt
gtttgctggtggcggaggtggttgtggttcttcccacccaaggtcctcct
atttccatgcttcttaaggtattcttttcttacttgattgctttcactca
cagattgacacccaatgctcatgacctatatcctttcattcagattatgg
taaattttttctcaagtatggctggagtcctttatttttatcag

cacaggaagatcaacagaatcaattaacatgaactccattcattcccaga
ctctgaatcaccaaccaaaaaatatcatatatggactggacctaggcctc
tgatatatatgtatcagatatgcaactgggcctaaatgtgggtcccaaac
aactgaagccagggcctatatatgggatatgttctactagctgtggcacc
ttgtctggtctcacagggagaggtgcctagcttcacaaacacttgaagtg
ccagggttgggggaatatccaggggaccctacctgctcaaagaaggaaat
tggagaatgggagaaggaattggggaggaggtgacagggaggggacagtg
aggaagatgtaaagcgaataattaaaaaaaattttttttttttttagcga
gacagagacactcctctattttttctgtctctccat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_60360403_60361538
seq2: B6Ng01-179J06.b_41_1184

seq1  GAATTCTTGCAGCATACTTGAATATATAACAATTAAAGGTGCAAGTAGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGCAGCATACTTGAATATATAACAATTAAAGGTGCAAGTAGGT  50

seq1  GTCTTGAACTACCACCGGTGATTAGCAAGTCCCTTAATATTAGGTCATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGAACTACCACCGGTGATTAGCAAGTCCCTTAATATTAGGTCATAT  100

seq1  AAATCTTGATATTCTTATATAAAATGAGATATATTGTGTAAAATCTTCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTTGATATTCTTATATAAAATGAGATATATTGTGTAAAATCTTCCA  150

seq1  TTTATATACATTTATCAATACTGTATAAATGCAAATGAGCTAATTTGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATATACATTTATCAATACTGTATAAATGCAAATGAGCTAATTTGTAT  200

seq1  TCAGAATCAGGTAGGCAGAAACATCTATAGTATGTATGCTAAGTGGGATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAATCAGGTAGGCAGAAACATCTATAGTATGTATGCTAAGTGGGATT  250

seq1  CTAATTCAGCTCCCATTTTCCCCCTCTCTGAATTAGTCAGTGAAACAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTCAGCTCCCATTTTCCCCCTCTCTGAATTAGTCAGTGAAACAGTT  300

seq1  ACCAATTTTTCTATACTTATTTATTTTCAGCATAAAATGGAAGCTGGCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATTTTTCTATACTTATTTATTTTCAGCATAAAATGGAAGCTGGCAG  350

seq1  GAAAGTTTAGGCAAACTTCAGACACAGGGTAGCAAATTTCATCCAAATAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTTTAGGCAAACTTCAGACACAGGGTAGCAAATTTCATCCAAATAC  400

seq1  ATAGCAGAAATAGGGGCTTATTCCTCTGTCCTCAAGTAATGTGTTAGCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCAGAAATAGGGGCTTATTCCTCTGTCCTCAAGTAATGTGTTAGCCT  450

seq1  TAAGATGAATAATCTGGGAAGTGATTTCTTCTGTTTAATTCTCTATGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATGAATAATCTGGGAAGTGATTTCTTCTGTTTAATTCTCTATGAAA  500

seq1  CATGCTATATGCAGTGGAAGGTGTGAAGCAGAAGACTGAATAGATACCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTATATGCAGTGGAAGGTGTGAAGCAGAAGACTGAATAGATACCTC  550

seq1  TTGTACTAGTGACATAGAGAGCTAGGACATAACTTACTAGGATAGTTTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTACTAGTGACATAGAGAGCTAGGACATAACTTACTAGGATAGTTTTA  600

seq1  AATCACAAAGATAGTAAAAATTATTTTGTAAAATAAAATTAACCTGCTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACAAAGATAGTAAAAATTATTTTGTAAAATAAAATTAACCTGCTGT  650

seq1  AGAATTTATTTTCAGATGACATTTCTGAAAGAAATAATTCCAAACATTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTATTTTCAGATGACATTTCTGAAAGAAATAATTCCAAACATTAT  700

seq1  CCTATTGTATTTGTGAGAAATTCAATGATAGTGATAATGTTATACTTGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTGTATTTGTGAGAAATTCAATGATAGTGATAATGTTATACTTGTA  750

seq1  GCTACTTTTTGAGTAGGTATAGTAGTTGTGAGGTAGAGATACTTTACTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTTTTTGAGTAGGTATAGTAGTTGTGAGGTAGAGATACTTTACTAG  800

seq1  AAGACAGAACCATTCTCATTCTTCCATTGTTTTAATCTGTGCAGCATTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAGAACCATTCTCATTCTTCCATTGTTTTAATCTGTGCAGCATTAT  850

seq1  ATGGGATTATCACATTCTCTATGGAGATCAGGAATAGAGGTTTGCAGAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGATTATCACATTCTCTATGGAGATCAGGAATAGAGGTTTGCAGAGT  900

seq1  TCCTTTTAGATATGGCATCTCAAAGAAATTTATGTGTTATTTCAAAACCT  950
      ||||||||||| ||||||||| ||||||||||||||||||||||||||||
seq2  TCCTTTTAGATTTGGCATCTC-AAGAAATTTATGTGTTATTTCAAAACCT  949

seq1  TGTTTGCTGGTGGCGGAGGTGG-TGTGG-TCCTCCCACCC-AGGTCCTCC  997
      |||||||||||||||||||||| ||||| || |||||||| |||||||||
seq2  TGTTTGCTGGTGGCGGAGGTGGTTGTGGTTCTTCCCACCCAAGGTCCTCC  999

seq1  TATTTCCATGC-TCTT-AGGTAATC-TTTCTTACTTGATTGCTTTCACTC  1044
      ||||||||||| |||| ||||| || ||||||||||||||||||||||||
seq2  TATTTCCATGCTTCTTAAGGTATTCTTTTCTTACTTGATTGCTTTCACTC  1049

seq1  ACAAGATGACACCC-ATGCTCATGA-CTATAT-CTTTCATTCAGATTATG  1091
      |||   |||||||| |||||||||| |||||| |||||||||||||||||
seq2  ACAGATTGACACCCAATGCTCATGACCTATATCCTTTCATTCAGATTATG  1099

seq1  GT-AATTTTTTCTCACAGTATGGTTGGAGTTCTTTATTTTTATCAG  1136
      || |||||||||||| ||||||| |||||| |||||||||||||||
seq2  GTAAATTTTTTCTCA-AGTATGGCTGGAGTCCTTTATTTTTATCAG  1144


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