MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-179O06
Chromosome	X (Build37)	X (Build37)
Map Location	123,303,801 - 123,304,890	123,303,826 - 123,312,416
singlet/doublet	singlet	singlet
Overlap gene	none
Upstream gene	EG665611, EG626048, LOC100040410, LOC100039903, LOC665679
Downstream gene	4932411N23Rik, Gm381, LOC100040472, Gm382, 4921511C20Rik, 4930412D23Rik
Link	Open Mouse BAC browser

Click to get alignment info.

name	EG665611 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665611 MGI:3646259
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 981 ESTs, 7 Proteins

name	EG626048 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:626048 MGI:3645883
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 937 ESTs, 7 Proteins

name	LOC100040410 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040410
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 1 Protein

name	LOC100039903 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039903
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 86 ESTs

name	LOC665679 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665679
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins pseudo : _no_value

name	4932411N23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:237029 MGI:3045322
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm381 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214308 MGI:2685227
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	LOC100040472 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040472
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs

name	Gm382 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:211208 MGI:2685228
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4921511C20Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245598 MGI:2685229
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA pseudo : _no_value

name	4930412D23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73934 MGI:1921184
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 Proteins

name	EG665611 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149272237 GeneID:665611 MGI:3646259
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 981 ESTs, 7 Proteins product : predicted gene, EG665611 transcript_id : XM_978135.2

name	EG626048 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94408243 GeneID:626048 MGI:3645883
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 936 ESTs, 7 Proteins product : predicted gene, EG626048, transcript variant 2 transcript_id : XM_890604.2

name	EG626048 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149272238 GeneID:626048 MGI:3645883
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 420 ESTs, 7 Proteins product : predicted gene, EG626048, transcript variant 1 transcript_id : XM_001473380.1

name	LOC100040410 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272248 GeneID:100040410
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 1 Protein product : similar to RIKEN cDNA 3110007F17 gene transcript_id : XM_001474637.1

name	LOC100039903 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272240 GeneID:100039903
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 86 ESTs product : hypothetical protein LOC100039903 transcript_id : XM_001473395.1

name	4932411N23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31343243 GeneID:237029 MGI:3045322
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4932411N23 gene transcript_id : NM_177705.2

name	Gm381 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:20985343 GeneID:214308 MGI:2685227
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : gene model 381, (NCBI) transcript_id : XM_142110.1

name	LOC100040472 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272250 GeneID:100040472
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs product : similar to pol protein transcript_id : XM_001474744.1

name	Gm382 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802851 GeneID:211208 MGI:2685228
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 382, (NCBI) transcript_id : NM_001033241.2

name	4930412D23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149272242 GeneID:73934 MGI:1921184
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 Proteins product : RIKEN cDNA 4930412D23 gene transcript_id : XM_001473476.1

name	EG665611 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94408240 GeneID:665611 MGI:3646259
definition	codon_start : 1 product : similar to 40S ribosomal protein S12 protein_id : XP_983229.1

name	EG626048 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149272239 GeneID:626048 MGI:3645883
definition	codon_start : 1 product : similar to 40S ribosomal protein S12 isoform 1 protein_id : XP_001473430.1

name	EG626048 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83003650 GeneID:626048 MGI:3645883
definition	codon_start : 1 product : similar to 40S ribosomal protein S12 isoform 2 protein_id : XP_895697.1

name	LOC100040410 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272249 GeneID:100040410
definition	codon_start : 1 product : similar to RIKEN cDNA 3110007F17 gene protein_id : XP_001474687.1

name	LOC100039903 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272241 GeneID:100039903
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473445.1

name	4932411N23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244162 CCDS:CCDS30382.1 GeneID:237029 MGI:3045322
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005681 - spliceosome complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0006397 - mRNA processing [Evidence IEA]; GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA] codon_start : 1 note : novel Myb-like DNA-binding domain containing protein product : hypothetical protein LOC237029 protein_id : NP_808373.1

name	Gm381 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20985344 GeneID:214308 MGI:2685227
definition	codon_start : 1 product : similar to novel gene coding for a KH domain containing protein protein_id : XP_142110.1

name	LOC100040472 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272251 GeneID:100040472
definition	codon_start : 1 product : similar to pol protein protein_id : XP_001474794.1

name	Gm382 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701740 GeneID:211208 MGI:2685228
definition	GO_function : GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC211208 protein_id : NP_001028413.1

name	4930412D23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149272243 GeneID:73934 MGI:1921184
definition	codon_start : 1 product : hypothetical protein LOC73934 protein_id : XP_001473526.1

name	LOC665679 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665679
definition	number : 2 pseudo : _no_value

name	LOC665679 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665679
definition	number : 1 pseudo : _no_value

name	4921511C20Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149272234 GeneID:245598 MGI:2685229
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4921511C20 gene pseudo : _no_value transcript_id : XR_035167.1

clone name	MSMg01-195N23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-524F05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-304N06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-079F14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-098J13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-140A21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-158N04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-181N24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-357B18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-412F23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-453F03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-453O14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-518L08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-262O21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-101C05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-368J06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-386G14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-500N14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-511L11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-523O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-216A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-406A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-296F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214D12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-145O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252B04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160B11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198N04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198N04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072A06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119L13
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-179O06.b	B6Ng01-179O06.g
ACC	GA006486	GA006487
length	1,098	596
definition	B6Ng01-179O06.b	B6Ng01-179O06.g
singlet/doublet	singlet	singlet
BLAST hit	unique	unique
Map location.	(123,303,801 - 123,304,890)	(123,303,826 - 123,312,416)
sequence	gaattcttccattttaacacatttttgtattaatttggtcaactttctca taataaattcaattcaatcatgtatgtttatattaaaatattgatctctt ctttgcaaaacttgtgaacatgagttttccctgttttccatttgaccagg ttttttttttctatcaaattcctccatttttccacgtttattgtaatttt tttctttttatccaaatgctgtttaagaacatttcgaattttatcagaaa atgattctctccattttctctattaggaaaaatatattttctttgttttc ctttctaactgaaggtttttccatcgaattcttccattataaaacatttt tctataaattttgtcaattttctcaaaaatatatatgaataacatcttgt atttttttaaaattaggtattttcctcaattacgtttccaattctatccc aaaagtcccccataccctccctcgcactcccctatcttacaatgatgacc tcagctgtctctcatagtgaacatgagttttctccattttcgatttgacc aatcgtttttcaatcaatttcctccattttaaccacatttttctgtacag ttttcacttttatcagaaatagtgtataagaacatcttgaaatttatcag aaaatgtttctctcctttttctctaatgaaaaagaatatgttttctacgt tttcctctttacccggtgatttttcaatctattatttccattttaacaca tttttaaaatatttttttcaattttgtcacaaatacattcgaatataatc ttttattttatcgtaatatgatgatctctagttttgaaaatagtgaaaca tgaattttctaagttttccatttgaacagcctgttttttccatcaatttc atccatttttaaccacaattttttcctgtagtttttctttcatttttatc agaaataatgtattaggaacatctcggattttcatcaaataatgtttctc tcaattttctctatagaaaaaataatgtttaatacgattccctttctacc aggtagtgttttccaaagaattcctccattttaaaaacatttttataa	gaattctttggaaaacactactggtagaaaggaaaacgtattaaacatat ttttcttttagtagaaaattgagagaaacattatttgatgaaattcgaga tgttctaatacattatttctgataaaaatgtaagaaaactataggaaaaa atgtggttaaaatggatgaaattgatgggaaaacaggctgttcaaatgga aaacttagaaaattcatgttcactatttgcaaaagcagagatcatcatat tatgatgaaataaaagattatattcgaatgcatttgtgacaaaattgaaa aaatattttaaaaatgtgttaaaatggaaataatagatgaaaaaacaccg ggtaaagaggacaacgtagaaaacatattctttttcattagagaaaaagg agagcaacattttctgataaatttcgagatgttcttatacattatttctg ataaaagtgaaaactacggaaaaatgtggttaaaatggaggaaattgttt gaaaaagcgattggtgaaatcgaaaatggagaaaactcatgttcactatg tgagaaagcagaggtcatcattgtaagataggggagtgggaggcag
quality values	Open. Hide. 10 12 9 13 62 62 62 62 62 31 14 62 62 62 47 51 49 44 31 47 59 62 62 62 62 62 59 62 62 59 59 62 14 19 18 12 23 18 18 16 23 30 18 23 18 18 30 43 59 59 62 62 62 62 62 62 62 62 62 54 54 62 62 62 59 62 62 62 59 59 62 54 42 49 62 62 62 62 49 49 49 38 31 28 49 31 40 40 23 28 23 23 48 59 62 62 62 62 62 62 62 62 62 62 62 62 62 56 59 59 59 62 62 62 54 62 59 62 62 62 62 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 54 62 56 56 62 59 59 62 62 62 62 62 62 62 59 62 62 59 59 59 59 62 62 62 50 56 48 54 62 62 62 62 56 59 59 56 56 62 62 62 62 62 62 59 59 62 59 62 62 56 54 62 59 59 51 56 56 32 49 48 56 62 62 62 62 59 50 62 62 59 62 62 62 62 56 59 49 36 62 56 59 59 59 62 62 59 62 62 59 59 48 48 46 46 56 54 62 59 56 48 48 43 50 56 59 59 50 56 62 59 62 59 59 56 56 56 56 62 62 59 56 56 59 59 56 56 50 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 51 48 48 62 56 62 62 62 62 62 62 62 56 54 62 51 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 62 62 62 62 62 62 62 62 62 62 62 62 56 56 56 62 62 56 62 54 62 62 62 62 56 62 62 62 62 51 56 56 56 56 56 62 62 51 37 27 46 56 51 56 56 42 62 62 56 62 62 62 62 62 62 62 54 56 62 62 62 56 62 56 62 56 62 62 62 62 62 47 47 62 11 14 9 9 10 14 62 62 62 52 62 62 62 52 62 62 62 62 62 62 62 62 62 52 62 62 62 38 62 62 62 47 33 54 58 58 58 58 58 58 54 54 58 48 54 54 54 58 52 58 58 58 54 54 46 58 58 58 52 52 54 36 37 42 58 58 54 52 58 54 42 58 41 52 49 54 58 33 58 48 52 52 52 54 52 34 44 46 52 47 52 52 54 46 54 52 58 37 58 38 19 43 47 46 33 47 41 48 54 51 47 42 54 50 48 49 50 47 40 43 50 40 50 42 33 49 35 50 58 58 58 33 58 58 32 50 29 58 50 39 38 41 51 40 32 38 48 51 49 43 28 41 39 41 40 53 53 50 28 49 48 41 50 58 17 58 29 18 58 58 58 33 49 39 39 32 41 47 40 39 35 41 50 49 41 46 54 32 58 58 58 41 25 16 39 33 50 34 51 58 58 58 29 28 54 54 54 35 34 25 54 54 54 54 54 50 39 31 35 42 54 50 32 32 40 40 25 37 29 51 49 35 23 45 26 39 39 46 19 49 49 37 40 32 53 32 30 51 37 54 54 19 37 26 54 54 15 44 24 51 35 16 36 33 31 39 31 33 37 26 31 41 25 32 40 53 34 39 25 27 52 40 32 24 24 47 51 41 27 34 27 21 22 9 52 18 16 31 26 26 29 16 31 51 51 34 30 25 16 29 26 36 51 51 28 30 25 23 13 46 30 27 30 30 28 26 30 18 25 7 32 8 37 46 37 46 15 31 31 26 26 31 29 31 31 48 29 17 12 18 19 46 12 9 46 41 41 21 43 33 36 43 13 32 11 23 6 28 31 27 39 18 18 29 20 46 11 36 9 8 39 46 39 19 31 18 41 27 17 14 33 48 48 46 23 24 12 31 31 18 44 28 7 12 6 10 11 5 6 18 11 30 26 8 8 32 31 31 24 32 37 24 10 8 9 36 13 31 41 11 15 24 21 23 22 44 34 9 20 25 8 23 20 31 23 32 22 34 27 21 11 15 13 25 18 23 28 15 43 16 29 33 16 15 21 43 21 37 39 21 12 7 8 15 29 18 48 23 30 14 18 14 11 6 14 7 31 7 29 7 30 40 11 15 6 7 11 21 13 17 10 20 16 7 7 15 9 30 32 19 6 9 15 33 28 24 11 20 6 9 27 27 15 16 24 12 24 40 38 24 9 29 40 27 10 11 6 13 19 17 17 18 7 6 5 4	Open. Hide. 62 59 43 59 62 62 62 62 62 62 49 28 18 24 17 34 15 23 21 21 18 18 28 23 17 23 34 46 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 44 39 23 28 28 23 48 34 27 38 29 27 28 46 34 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 54 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 54 62 62 62 62 59 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 22 18 10 7 5 5 11 14 59 62 59 59 62 62 62 62 62 62 59 59 56 48 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 54 58 49 54 58 58 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 58 54 54 58 58 54 54 58 45 41 58 58 58 54 58 58 54 58 58 47 48 54 58 58 58 50 58 58 58 58 51 58 58 49 58 58 58 54 54 50 58 58 58 58 58 51 58 58 49 58 58 58 50 53 58 43 58 48 58 49 51 50 51 51 48 51 51 58 58 44 58 58 58 50 58 58 58 58 58 58 37 28 58 50 44 51 50 49 33 9 8

Alignment Information

BAC End 1

BAC End 2

seq1: chrX_123303801_123304890
seq2: B6Ng01-179O06.b_42_1139 (reverse)

seq1  TTATAAAAAATGTTTTAAAATGGAGGAATTCTTTGGAAAACACTA-CTGG  49
      |||||||||   ||||||||||||||||||||||||||||||||| ||||
seq2  TTATAAAAATGTTTTTAAAATGGAGGAATTCTTTGGAAAACACTACCTGG  50

seq1  TAGAAAGGAATGCGTATTAAACA-TATTTTTCTAATAGGAGAAAATTGAG  98
      |||||||| |  ||||||||||| |||||||   ||| ||||||||||||
seq2  TAGAAAGGGAATCGTATTAAACATTATTTTTTCTATA-GAGAAAATTGAG  99

seq1  AGAAACATTATTTGATG-AAATTCGAGATGTT-CTAATACATTATTTCTG  146
      ||||||||||||||||| |||| ||||||||| |||||||||||||||||
seq2  AGAAACATTATTTGATGAAAATCCGAGATGTTCCTAATACATTATTTCTG  149

seq1  ATAAAAATGTAAG-AAAACTACAGGAAAAAA-TGTGGTT-AAAATGGATG  193
      ||||||||| ||| ||||||||||||||||| ||||||| ||||||||||
seq2  ATAAAAATGAAAGAAAAACTACAGGAAAAAATTGTGGTTAAAAATGGATG  199

seq1  AAATTGATGG-AAAAACAGGCTGTTCAAATGGAAAACTTAGAAAATTCAT  242
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AAATTGATGGAAAAAACAGGCTGTTCAAATGGAAAACTTAGAAAATTCAT  249

seq1  G-TTCACTATTTTCAAAACTATAGATCATCATATTACGATAAAATAAAAG  291
      | ||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GTTTCACTATTTTCAAAACTAGAGATCATCATATTACGATAAAATAAAAG  299

seq1  ATTATATTCGAATGTATTTGTGACAAAATTGAAAAAAAATATTTTAAAAA  341
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ATTATATTCGAATGTATTTGTGACAAAATTG-AAAAAAATATTTTAAAAA  348

seq1  CGTGTTAAAATGGAAATAATAGATTGAAAAATCACCGGGTAAAGAGGAAA  391
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTAAAATGGAAATAATAGATTGAAAAATCACCGGGTAAAGAGGAAA  398

seq1  ACGTAGAAAACATATTCTTTTTCATTAGAGAAAAAGGAGAGAAACATTTT  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTAGAAAACATATTCTTTTTCATTAGAGAAAAAGGAGAGAAACATTTT  448

seq1  CTGATAAATTTTGAGATGTTCTTATACACTATTTCTGATAAAAGTGAAAA  491
      |||||||||||  |||||||||||||||||||||||||||||||||||||
seq2  CTGATAAATTTCAAGATGTTCTTATACACTATTTCTGATAAAAGTGAAAA  498

seq1  CTGTACAGAAAAATGTGGTTAAAATGGAGGAAATTGATTGAAAAACGATT  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACAGAAAAATGTGGTTAAAATGGAGGAAATTGATTGAAAAACGATT  548

seq1  GGTCAAATCGAAAATGGAGAAAACTCATGTTCACTATGAGAGACAGCTGA  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAAATCGAAAATGGAGAAAACTCATGTTCACTATGAGAGACAGCTGA  598

seq1  GGTCATCATTGTAAGATAGGGGAGTGCGAGGGAGGGTATGGGGGACTTTT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATCATTGTAAGATAGGGGAGTGCGAGGGAGGGTATGGGGGACTTTT  648

seq1  GGGATAGAATTGGAAACGTAATTGAGGAAAATACCTAATTTAAAAAAAAT  691
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GGGATAGAATTGGAAACGTAATTGAGGAAAATACCTAATTTTAAAAAAAT  698

seq1  ACAAGATGTTATTCAAATATATTTTTGAGAAAATTGACAAAATTTATAGA  741
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  ACAAGATGTTATTCATATATATTTTTGAGAAAATTGACAAAATTTATAGA  748

seq1  AAAATGTTTTATAATGGAAGAATTCGATGGAAAAACCTTCAGTTAGAAAG  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTTTTATAATGGAAGAATTCGATGGAAAAACCTTCAGTTAGAAAG  798

seq1  GAAAACAAAGAAAACATATTTTTCCTAATAGAGAAAATGGAGAGAATCAT  841
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GAAAACAAAGAAAATATATTTTTCCTAATAGAGAAAATGGAGAGAATCAT  848

seq1  TTTCTGATAAAATTCGAAATGTTCTTAAACAGCATTTGGATAAAAAGTAA  891
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TTTCTGATAAAATTCGAAATGTTCTTAAACAGCATTTGGATAAAAAGAAA  898

seq1  AAAATTACAATAAACGTGGAAAAATGGAGGAATTTGATAG-AAAAAAAAA  940
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AAAATTACAATAAACGTGGAAAAATGGAGGAATTTGATAGAAAAAAAAAA  948

seq1  CCTGGTCAAATGGAAAACAGGGAAAACTCATGTTCACAAGTTTTGCAAAG  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTCAAATGGAAAACAGGGAAAACTCATGTTCACAAGTTTTGCAAAG  998

seq1  AAGAGATCAATATTTTAATATAAACATACATGATTGAATTGAATTTATTA  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGATCAATATTTTAATATAAACATACATGATTGAATTGAATTTATTA  1048

seq1  TGAGAAAGTTGACCAAATTAATACAAAAATGTGTTAAAATGGAAGAATTC  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAAGTTGACCAAATTAATACAAAAATGTGTTAAAATGGAAGAATTC  1098

seq1: chrX_123303826_123312416
seq2: B6Ng01-179O06.g_67_662

seq1  GAATTCTTTGGAAAACACTACTGGTAGAAAGGAATGCGTATTAAACATAT  50
                                                        
seq2  --------------------------------------------------  0

seq1  TTTTCTAATAGGAGAAAATTGAGAGAAACATTATTTGATGAAATTCGAGA  100
                                                        
seq2  --------------------------------------------------  0

seq1  TGTTCTAATACATTATTTCTGATAAAAATGTAAGAAAACTACAGGAAAAA  150
                                                        
seq2  --------------------------------------------------  0

seq1  ATGTGGTTAAAATGGATGAAATTGATGGAAAAACAGGCTGTTCAAATGGA  200
                                                        
seq2  --------------------------------------------------  0

seq1  AAACTTAGAAAATTCATGTTCACTATTTTCAAAACTATAGATCATCATAT  250
                                                        
seq2  --------------------------------------------------  0

seq1  TACGATAAAATAAAAGATTATATTCGAATGTATTTGTGACAAAATTGAAA  300
                                                        
seq2  --------------------------------------------------  0

seq1  AAAAATATTTTAAAAACGTGTTAAAATGGAAATAATAGATTGAAAAATCA  350
                                                        
seq2  --------------------------------------------------  0

seq1  CCGGGTAAAGAGGAAAACGTAGAAAACATATTCTTTTTCATTAGAGAAAA  400
                                                        
seq2  --------------------------------------------------  0

seq1  AGGAGAGAAACATTTTCTGATAAATTTTGAGATGTTCTTATACACTATTT  450
                                                        
seq2  --------------------------------------------------  0

seq1  CTGATAAAAGTGAAAACTGTACAGAAAAATGTGGTTAAAATGGAGGAAAT  500
                                                        
seq2  --------------------------------------------------  0

seq1  TGATTGAAAAACGATTGGTCAAATCGAAAATGGAGAAAACTCATGTTCAC  550
                                                        
seq2  --------------------------------------------------  0

seq1  TATGAGAGACAGCTGAGGTCATCATTGTAAGATAGGGGAGTGCGAGGGAG  600
                                                        
seq2  --------------------------------------------------  0

seq1  GGTATGGGGGACTTTTGGGATAGAATTGGAAACGTAATTGAGGAAAATAC  650
                                                        
seq2  --------------------------------------------------  0

seq1  CTAATTTAAAAAAAATACAAGATGTTATTCAAATATATTTTTGAGAAAAT  700
                                                        
seq2  --------------------------------------------------  0

seq1  TGACAAAATTTATAGAAAAATGTTTTATAATGGAAGAATTCGATGGAAAA  750
                                                        
seq2  --------------------------------------------------  0

seq1  ACCTTCAGTTAGAAAGGAAAACAAAGAAAACATATTTTTCCTAATAGAGA  800
                                                        
seq2  --------------------------------------------------  0

seq1  AAATGGAGAGAATCATTTTCTGATAAAATTCGAAATGTTCTTAAACAGCA  850
                                                        
seq2  --------------------------------------------------  0

seq1  TTTGGATAAAAAGTAAAAAATTACAATAAACGTGGAAAAATGGAGGAATT  900
                                                        
seq2  --------------------------------------------------  0

seq1  TGATAGAAAAAAAAACCTGGTCAAATGGAAAACAGGGAAAACTCATGTTC  950
                                                        
seq2  --------------------------------------------------  0

seq1  ACAAGTTTTGCAAAGAAGAGATCAATATTTTAATATAAACATACATGATT  1000
                                                        
seq2  --------------------------------------------------  0

seq1  GAATTGAATTTATTATGAGAAAGTTGACCAAATTAATACAAAAATGTGTT  1050
                                                        
seq2  --------------------------------------------------  0

seq1  AAAATGGAAGAATTCAATGAAAAAAAAAAAACTCCTGGTAGAAAGGCAAA  1100
                                                        
seq2  --------------------------------------------------  0

seq1  CATAGAAAACCTGTTTTTCCTATTAGAAAAATTGGATAGAAACATTTTCT  1150
                                                        
seq2  --------------------------------------------------  0

seq1  CATAAAATTCGAGATGTTCTTATACAGCATATTTGGTAAAAATGCAAAAA  1200
                                                        
seq2  --------------------------------------------------  0

seq1  TTATACAAAAATATGGATAAGTTGTAAAAAAATTGATGGAAACAGGCTTG  1250
                                                        
seq2  --------------------------------------------------  0

seq1  TATTATTGAAGACGTAGAAAAATAATGTTCACTATTTGAGAAAGTAGAGA  1300
                                                        
seq2  --------------------------------------------------  0

seq1  TCTTCGTTGCAAGTTAAAATAGAAGATTTTATTAGAATGTATTTGTGAGA  1350
                                                        
seq2  --------------------------------------------------  0

seq1  TAATTAAAAAAAATTATAAAAAATGTTTTAAAATGGAGGAATTCTTTGGA  1400
                                                        
seq2  --------------------------------------------------  0

seq1  AAACACTACTGGTAGAAAGGAATGCGTATTAAACATATTTTTCTAATAGG  1450
                                                        
seq2  --------------------------------------------------  0

seq1  AGAAAATTGAGAGAAATATTATTTGATGAAATTCGAGATGTTCTAATACA  1500
                                                        
seq2  --------------------------------------------------  0

seq1  TTATTTTTGATAAAAATGTAAGAAAACTACAGGAAAAAATGTGGTTAAAA  1550
                                                        
seq2  --------------------------------------------------  0

seq1  TGGATGAAATTGATGGAAAAACAGGCTGTTCAAATGGAAAACTTAGAAAA  1600
                                                        
seq2  --------------------------------------------------  0

seq1  TTCATGTTCACTATTTTCAAAACTATAGATCATCATATTACGATAAAATA  1650
                                                        
seq2  --------------------------------------------------  0

seq1  AAAGATTATATTCGAATGTATTTGTGACAAAATTGAAAAAATATTTTAAA  1700
                                                        
seq2  --------------------------------------------------  0

seq1  AATGTGTTAAAATGGAAATAATAGATTGAAAAATCACCGGGTAAAGAGGA  1750
                                                        
seq2  --------------------------------------------------  0

seq1  AAACGTAGAAAACATATTCTTTTTCATTAGAGAAAAAGGAGAGAAACATT  1800
                                                        
seq2  --------------------------------------------------  0

seq1  TTCTGATAAATTTCGAGATGTTCTTATACACTATATCTGATAAAAGTGAA  1850
                                                        
seq2  --------------------------------------------------  0

seq1  AACTGTACAGAAAAATGTGGTTAAAATGGAGGAAATTGATTGAAAATCGA  1900
                                                        
seq2  --------------------------------------------------  0

seq1  TTGGTCAAATCGAAAATGGAGAAAACTCATGTTCACTATGAGAGACAGCT  1950
                                                        
seq2  --------------------------------------------------  0

seq1  GAGGTCATCATTGTAAGATAGGGGAGTGCGAGGGAGGGTATGGGGGACTT  2000
                                                        
seq2  --------------------------------------------------  0

seq1  TTGGGATTGAATTGGAAACGTAATTGAGGAAAATACCTAATTTTAAAAAA  2050
                                                        
seq2  --------------------------------------------------  0

seq1  ATACAAGATGTTATTCAAATATATTTTTGAGAAAATTGACAAAATTTATA  2100
                                                        
seq2  --------------------------------------------------  0

seq1  GAAAAATGTTTTATAATGGAAGAATTCGATGGAAAAACCTTCAGTTAGAA  2150
                                                        
seq2  --------------------------------------------------  0

seq1  AGGAAAACAAAGAAAACATATTTTTCCTAATAGAGAAAATGGAGAGAATC  2200
                                                        
seq2  --------------------------------------------------  0

seq1  ATTTTCTGATAAAATTCGAGATGTTCTTAAACAGCATTTGGATAAAAAGA  2250
                                                        
seq2  --------------------------------------------------  0

seq1  AAAAAAAAATTACAATAAATGAGGAAAAATGGAGGAATTTGATAGAAAAA  2300
                                                        
seq2  --------------------------------------------------  0

seq1  AAACCTGGTCAAATGGAAAACAGGGAAAACTCATGTTCACAAGTTTGCAA  2350
                                                        
seq2  --------------------------------------------------  0

seq1  AGAAGAGATCAATATTTTAATATAAAAATACAAGATTGAATTGAATTTAT  2400
                                                        
seq2  --------------------------------------------------  0

seq1  TATGAGAAAGTTGACCAAATTAATACAAAAATGTGTTAAAATGGAAGAAT  2450
                                                        
seq2  --------------------------------------------------  0

seq1  TCAATGAAAAAAAAACTACTGGTAGAAAGGCAAACATAGAAAACCTGTTT  2500
                                                        
seq2  --------------------------------------------------  0

seq1  TTCCTATTAGAAAAATTGGATAGAAACATTTTCTGGTAAAATTCGAGATG  2550
                                                        
seq2  --------------------------------------------------  0

seq1  TTCTTATACAGCATATTTGGTAAAAATGCAAAAATTATACAAAAATATGG  2600
                                                        
seq2  --------------------------------------------------  0

seq1  ATAAGTTGTATAAAAATTTATGGAAAAAGGCTTGTATTATTGAAGACGTA  2650
                                                        
seq2  --------------------------------------------------  0

seq1  GAAAAATAATGTTCACTATTTGAGAAAGTAGAGATCTTCGTTGCAAGTTA  2700
                                                        
seq2  --------------------------------------------------  0

seq1  AAATAGAAGATTTTATTAGAATGTATTTGTGAGAAAATTGAAAAAAAATA  2750
                                                        
seq2  --------------------------------------------------  0

seq1  TAAAAAAATGTTTTAAAATGGAGGAATTCTTTGGAAAACACTACTGGTAG  2800
                                                        
seq2  --------------------------------------------------  0

seq1  AAAGGAATGCGTATTAAACATATTTTTCTAATAGGAGAAAATTGAGAGAA  2850
                                                        
seq2  --------------------------------------------------  0

seq1  ACATTATTTGATGAAATTCGAGATGTTCTAATACATTATTTCTGGAAAAA  2900
                                                        
seq2  --------------------------------------------------  0

seq1  ATGTAAGAAAACTACAGGAAAAAATGTGGTTAAAATGGAGGAAATTGATT  2950
                                                        
seq2  --------------------------------------------------  0

seq1  GAAAAACGATTGGTGATATCGAAAATGGAGAAAACTCATGTTCACTATGA  3000
                                                        
seq2  --------------------------------------------------  0

seq1  GAGAAAGCTGAGGTCATCAATGTAAGATAAGGGAGTGCGAGGGAGGGTAT  3050
                                                        
seq2  --------------------------------------------------  0

seq1  GGGGTACTTTTGGGATAGAATTTGAAACGTAATTGAGGAAAATACCTAAT  3100
                                                        
seq2  --------------------------------------------------  0

seq1  TTAATAAAAATACAAGATGGTATTCAAATATATTTTTGAGAAAATTGACA  3150
                                                        
seq2  --------------------------------------------------  0

seq1  AAATTTATAGAAAAATGTTTTATAATGGAAGAATTCGATGGAAAAACCTT  3200
                                                        
seq2  --------------------------------------------------  0

seq1  CAGTTAGAAAGGAAAACAAAGAAAACATATTTTTCCGAATAGAGAAAATG  3250
                                                        
seq2  --------------------------------------------------  0

seq1  GAGAGAATCATTTTCTGATAAAATTCGAGATGTTCTTAAACAGCATTTGG  3300
                                                        
seq2  --------------------------------------------------  0

seq1  ATAAAAAGAAAAAAAAATTACAATAAATGAGGAAAAATGGAGGAATTTGA  3350
                                                        
seq2  --------------------------------------------------  0

seq1  TAGAAAAAAAACCTGGTCAAATGGAAAACAGGGAAAACTCATGTTCACAA  3400
                                                        
seq2  --------------------------------------------------  0

seq1  GTTTGCAAAGAAGAGATCAATATTTTAATATAAAAATACAAGATTGAATT  3450
                                                        
seq2  --------------------------------------------------  0

seq1  GAATTTATTATGAGAAAATTGACCAAATTAATACAAAAATGTGTTAAAAT  3500
                                                        
seq2  --------------------------------------------------  0

seq1  GGAAGAATTTAATGAAAAAAAACTACTGGTAGAAAGGCAAACATAGAAAA  3550
                                                        
seq2  --------------------------------------------------  0

seq1  CCTGTTTTTTCTATTAGAAAAATTGGATAGAAACATTTTCTGATAAAATT  3600
                                                        
seq2  --------------------------------------------------  0

seq1  CGAGATGTTCTTATACAGCATATTTGGTAAAAATGCAAAAATTATACAAA  3650
                                                        
seq2  --------------------------------------------------  0

seq1  AATATGGATAAGTTGTAAAAAAATTGATGGAAAAAGGCTAGTATTATTGA  3700
                                                        
seq2  --------------------------------------------------  0

seq1  AGACGTAGAAAAATAATGTTCACTATTTGAGAAAGTAGAGATCTTCGTTG  3750
                                                        
seq2  --------------------------------------------------  0

seq1  CAAGTTAAAATAGAAGATTTTATTAGAATGTATCTGTGAGAATATTGAAA  3800
                                                        
seq2  --------------------------------------------------  0

seq1  AAATTATAAAAAAATGTTTTAAAATGGAGGAATTCTTTGGAAAACACTAC  3850
                                                        
seq2  --------------------------------------------------  0

seq1  TGGTAGAAAGGAAAGCGTATTAAACATGTTTTTCTAATAGGAGAAAATTG  3900
                                                        
seq2  --------------------------------------------------  0

seq1  AGAGAAACATTATTTGATGAAATTCGAGATGCTCTAATACATTATTTCTG  3950
                                                        
seq2  --------------------------------------------------  0

seq1  ATAAAAATGTAAGAAAACTACAGGAAAAAAAAGGGTTAAAATGGATGAAA  4000
                                                        
seq2  --------------------------------------------------  0

seq1  TTGATGGAAAAACAGGCTGTACAAATGGAAAACTTAGAAAATTCATCTTC  4050
                                                        
seq2  --------------------------------------------------  0

seq1  ACTATTTGCAAAAGCAGAGATCATCATATTACGATAAAATAAAAGATTAT  4100
                                                        
seq2  --------------------------------------------------  0

seq1  ATTCGAATGTATTTGTGACAAAATTCAAAAAAAATATTTTAAAAATGTGT  4150
                                                        
seq2  --------------------------------------------------  0

seq1  TAAAATGGAAATATTAGAGTGAAAAAACACCGGGTAAAGAGGAAAACGTA  4200
                                                        
seq2  --------------------------------------------------  0

seq1  GAAAACATATTCTTTTCCATTAGACAAAAAGGAGAGAAACATTTTCTGAT  4250
                                                        
seq2  --------------------------------------------------  0

seq1  AAATTTCGAGATGTTCTTATACACTATTTCTGATAAAAGTGAAAACTGTA  4300
                                                        
seq2  --------------------------------------------------  0

seq1  CAGAAAAATGTGGTTAAAATGGAGGAAATTGATTGAAAAACGATTGGTCA  4350
                                                        
seq2  --------------------------------------------------  0

seq1  AATCGAAAATGGAGAAAACTCATGTTCACTATGAGAGAAAGCTGAGGTCA  4400
                                                        
seq2  --------------------------------------------------  0

seq1  TCAATGTAAGATAGGGGAGTGCGAGGGAGGGTATGGGGGACTTTTGGGAT  4450
                                                        
seq2  --------------------------------------------------  0

seq1  AGAATTGGAAACGTAATTGAGGAAAATACCCAATTTTAAAAAATTACAAG  4500
                                                        
seq2  --------------------------------------------------  0

seq1  ATGTTATTCAAATGTATTTTTGAGAAAATTGACAAAATTTATAGAAAAAT  4550
                                                        
seq2  --------------------------------------------------  0

seq1  GTTTTATAATGGAAGAATTCGATGGAAAAACCTTCAGTTAGAAAGGAAAA  4600
                                                        
seq2  --------------------------------------------------  0

seq1  CAAAGAAAACATATTTTTTCTAATAGAGAAAATGGAGAGAATCATTTTCT  4650
                                                        
seq2  --------------------------------------------------  0

seq1  GAGAAAAATCGAGATATTCTTAAACAGCATTTGGATAAAAAGAAAAAAAT  4700
                                                        
seq2  --------------------------------------------------  0

seq1  TACAAAAACGTGGAAAAATGGAGGAATTTGATAGAAAAAAAACCTGGTCA  4750
                                                        
seq2  --------------------------------------------------  0

seq1  TTTGGAAAACAGGGAAAACTCATGTTCACAAGTTTGCAAAGAAGAGATCA  4800
                                                        
seq2  --------------------------------------------------  0

seq1  ATATTTTAATATAAAAATACAAGATTAATTTTAATTTATTCATGAGAAAG  4850
                                                        
seq2  --------------------------------------------------  0

seq1  TTGACAAAATTAATACAAAAATGTGTTAAAATTGAAGAATTCAATGAAAA  4900
                                                        
seq2  --------------------------------------------------  0

seq1  AAAAAAAACTACTGGTAGAAAGGCAAACATAGAAAACGTGTTTTTCCTAT  4950
                                                        
seq2  --------------------------------------------------  0

seq1  TAGAAAAATTGGATAGAAACATTTTCTGATAAAATTCGAGATGTTCTTAT  5000
                                                        
seq2  --------------------------------------------------  0

seq1  ACAGCATATTTGGTAAAAATGCAAAAATTATACAAAAATATGAGTAAATT  5050
                                                        
seq2  --------------------------------------------------  0

seq1  GTAAAAAAAATTGATGGAAAAAAATGCTTGTATTATTGAAGACGTAGAAA  5100
                                                        
seq2  --------------------------------------------------  0

seq1  AATCATGTTCACTATTTGAGAAAGTAGAGATCTTCATTGCAAGTAAATAT  5150
                                                        
seq2  --------------------------------------------------  0

seq1  AGAAGATTTTATTAGAAGGTATTTGTGTGAAAATTGAAAAAAATTATAAA  5200
                                                        
seq2  --------------------------------------------------  0

seq1  AAAAATGTTTTAAAATGAAGGAATTCTTTGGCAAACTCTACTGTTAGAAA  5250
                                                        
seq2  --------------------------------------------------  0

seq1  GTAAAGCGTAGAAAACATATTTGTCTAATAGGAGAAAATTGAGAGAAACA  5300
                                                        
seq2  --------------------------------------------------  0

seq1  TTATTTGATGAAATTTGAGATGTTCTAATACATTATTTCTGATAAAAATG  5350
                                                        
seq2  --------------------------------------------------  0

seq1  TAGGAAAACTATAGGAAAAAAATGTGGTTAAAATGGATGAAATTGTTGGA  5400
                                                        
seq2  --------------------------------------------------  0

seq1  AAACCAGGCTGTTCAAATGGAAAACTTAGAAAATTCATGTTCACTATTTG  5450
                                                        
seq2  --------------------------------------------------  0

seq1  CAAAAGCAGAGATCATCATATTACGACAAAATCAAAGATTATATTCGAAT  5500
                                                        
seq2  --------------------------------------------------  0

seq1  GTATTTGTGACAAAATTGAAAAAAATATTTTAAAAATGTGTTAAAATGGA  5550
                                                        
seq2  --------------------------------------------------  0

seq1  AATATTAGAGTGAAAAAACACCGGGTAAAGAGGAAAACGTAGAAAACACA  5600
                                                        
seq2  --------------------------------------------------  0

seq1  TTCTTTTTCATTAGACAAAAAGGAGAGAAACATTTTCTGATAAATTTCGA  5650
                                                        
seq2  --------------------------------------------------  0

seq1  GATGTTCTTATTCACTATTTCTGATAAAAGTGAAAACTGTACAGAAAAAA  5700
                                                        
seq2  --------------------------------------------------  0

seq1  TGTGGTTAAAATGAAGGAAATTGATTGAAAAATGATTGGTCAAATCGAAA  5750
                                                        
seq2  --------------------------------------------------  0

seq1  ATGGAGAAAACTCATGTTCACTATAAGAGAAAGCTGAGGTCATCATTGTA  5800
                                                        
seq2  --------------------------------------------------  0

seq1  AGATAGGGGAGTGCGAGGGAGGGAATGGGGGACTTTTGGGATAGAATTGG  5850
                                                        
seq2  --------------------------------------------------  0

seq1  AAACTTAATTGAGGAAAATACCTAATTTTTTAAAAAATACAAGATGTTAT  5900
                                                        
seq2  --------------------------------------------------  0

seq1  TCAAATATATTTTTGAGAAAATTGACAAAATTTAAAGAAAAATGTTTTAT  5950
                                                        
seq2  --------------------------------------------------  0

seq1  AATGGAAGAATTCGATGGAAAAACCTTCAGTTAGAAAGGAAAACAAAGAA  6000
                                                        
seq2  --------------------------------------------------  0

seq1  AACATATTTTTCCTAATAGAGAAAATGGAGAGAATCATTTTCTGATAAAA  6050
                                                        
seq2  --------------------------------------------------  0

seq1  TTCGAGATGTTCTTAAACAGCATTTGGATAAAAAGAAAAAAATTACAATA  6100
                                                        
seq2  --------------------------------------------------  0

seq1  AACGTGGAAAAATGGAGGAATTTGATAGAAAAAAAAAACCTGGTCAATTG  6150
                                                        
seq2  --------------------------------------------------  0

seq1  GAAAACAGGTAAAACTCATGTTCACAAGTTTGCAAAGAAGAGATCAATAT  6200
                                                        
seq2  --------------------------------------------------  0

seq1  TTTAATAAAAAAATGCAAGATTGAATTCTAATTTATTTATGAGAAAGTTG  6250
                                                        
seq2  --------------------------------------------------  0

seq1  ACAAAATTAATACAAAAATGTGTTAAAATGGAAGAATTCAATGAAAAAAA  6300
                                                        
seq2  --------------------------------------------------  0

seq1  AAAAACTACTGGTAGAAAGGCAAACATAGAAAACCTGTTTTTTTTATTAG  6350
                                                        
seq2  --------------------------------------------------  0

seq1  AAAAATTGGATAGAAACATTTTCTGATAAAATTCGAGACGTTCATATACA  6400
                                                        
seq2  --------------------------------------------------  0

seq1  GCATATTTGGTAAAAAATGCAAAAATTATACAAAAATATGGATAAGTTGT  6450
                                                        
seq2  --------------------------------------------------  0

seq1  AAAAAAATTGATGGAAAAAGGCTTGTATTATTGAAGACGTAGAAAAATAA  6500
                                                        
seq2  --------------------------------------------------  0

seq1  TGTTCACTATTTGAGAAAGTAGAGATTTTCCTTGCAAGTTAAAATAGAAG  6550
                                                        
seq2  --------------------------------------------------  0

seq1  ATTTTATTAGAATGTATTTGTGAGAAAATTGAAAAAAATTATAAAAAAAT  6600
                                                        
seq2  --------------------------------------------------  0

seq1  GTTTTAAAATGGAGGAATTCTTTGGAAAACACTACTGGTAGAAAGGAAAG  6650
                                                        
seq2  --------------------------------------------------  0

seq1  GATATTAAACATATTTATCTAATAGGAGAAAATTGAGAGAAACATTATTT  6700
                                                        
seq2  --------------------------------------------------  0

seq1  GATGAAATTCAGGATGTTCTAATACATTATTTATGAAAAAAAATGTAAGA  6750
                                                        
seq2  --------------------------------------------------  0

seq1  AAACTATAGGAAAAATGTGGTTAAAATTGATGAAATTGATGGAAAAACAG  6800
                                                        
seq2  --------------------------------------------------  0

seq1  GCTGTACAAATGGAAAACGTAGAAAATTCATGTTCACTATTTGCAAAAGC  6850
                                                        
seq2  --------------------------------------------------  0

seq1  AGAGATCATCATATTACGATAAAATAAAAGATTACATTCGAATGTATTTG  6900
                                                        
seq2  --------------------------------------------------  0

seq1  TGACAAAATTGAAAAAATATTTTAAAAATATGTTAAAATGGAAATAATAG  6950
                                                        
seq2  --------------------------------------------------  0

seq1  ATTGAAAAAACACCGGGTAAAGAGGAAAATGCAGAAAACATATTCTTTTT  7000
                                                        
seq2  --------------------------------------------------  0

seq1  CATTAGAGTAAAAGGAGAGAAACATTTTCTGATAAATTTTCAGATGTTCT  7050
                                                        
seq2  --------------------------------------------------  0

seq1  TATACCCTATTTCTGATAAAAGTGAAAACTGTACAGAAAAATGTGGTTAA  7100
                                                        
seq2  --------------------------------------------------  0

seq1  AATGGAGGAAATTGATTGAAAAACGATTGGTCAAATCGAAAATGGAGAAA  7150
                                                        
seq2  --------------------------------------------------  0

seq1  ACTCATGTTCACTATGAGAGAAAGCAGAGGTCATCAATGTAAGATAGGAA  7200
                                                        
seq2  --------------------------------------------------  0

seq1  AGTGCGAGGGACGGTATGGGGGACTTTTGGGATAGAATTGGAAACGTAAT  7250
                                                        
seq2  --------------------------------------------------  0

seq1  TGAGGAAAATACCTAATTTTAAAATAATACAAGATGTTATTCAAATATAT  7300
                                                        
seq2  --------------------------------------------------  0

seq1  TTTTGAGAAAATTGACAAAATTTAAAGAAAAATGTTTTATAATGGAAGAA  7350
                                                        
seq2  --------------------------------------------------  0

seq1  TTTGATGGAAAAACCTTCAGTTAGAAAGGAAAACAAAGAAAACATATTTT  7400
                                                        
seq2  --------------------------------------------------  0

seq1  TCCTAATAGAGAAAATGTAGAGAATCATTTTCTGATAAAATTCGAGTTGT  7450
                                                        
seq2  --------------------------------------------------  0

seq1  TCTTAAACAGCATTTGGATAAAAAAAAAATTACAATAAACGAGGAAAAAT  7500
                                                        
seq2  --------------------------------------------------  0

seq1  GGAGGAATTTGATAGAAAAAAAACCTGGTCAAATCGAAAACAGGGAAAAC  7550
                                                        
seq2  --------------------------------------------------  0

seq1  TCATGTTCACAAGTTTGCAAAGAAGAGATCAATATTTTAATATAAAAATA  7600
                                                        
seq2  --------------------------------------------------  0

seq1  CAAGATTGAATTGAATTTATTATGAGAAATTTGACAAAATTAATACAAAA  7650
                                                        
seq2  --------------------------------------------------  0

seq1  ATGTGTTAAAATGGAAGAATTCAATGAAAAAAAAACTACTGGTAGAAAGG  7700
                                                        
seq2  --------------------------------------------------  0

seq1  CAAACATAGAAAACCTGTTTTTCCTATTAAAAAATTGGATAGAAACATTT  7750
                                                        
seq2  --------------------------------------------------  0

seq1  TCTCATAAAAATCGAGATGTTCTTATATAGCATATTTGGTAAAAATGCAA  7800
                                                        
seq2  --------------------------------------------------  0

seq1  AAATTATACAAAAATATGGATAAGTTGTAAAAAAATTGATGGAAAAAGGC  7850
                                                        
seq2  --------------------------------------------------  0

seq1  TTGTATTATTGAAGACGTAGAAAAATAATGTTCACTATTTGAGAAAGTAG  7900
                                                        
seq2  --------------------------------------------------  0

seq1  AGATCTTCGTTGCAAGTTAAAATAGAAGATTTTATTAGAATGTTATTTGT  7950
                                                        
seq2  --------------------------------------------------  0

seq1  GAGAAAATTGAAAAAAATTATAAAAAATGTTTTAAAATGGAGGAATTCTT  8000
                                                ||||||||
seq2  ------------------------------------------GAATTCTT  8

seq1  TGGAAAACACTACTGGTAGAAATGAAAGCGTATTAAACATGTTTTTCTAA  8050
      |||||||||||||||||||||| |||| |||||||||||| |||||||  
seq2  TGGAAAACACTACTGGTAGAAAGGAAAACGTATTAAACATATTTTTCTTT  58

seq1  TAGGAGAAAATTGAGAGAAACATTATTTGATGAAATTCGAGATGCTCTAA  8100
      ||| |||||||||||||||||||||||||||||||||||||||| |||||
seq2  TAGTAGAAAATTGAGAGAAACATTATTTGATGAAATTCGAGATGTTCTAA  108

seq1  TACATTATTTCTGATAAAAATGTAAGAAAACTACAGGAAAAAAAG-GGTT  8149
      ||||||||||||||||||||||||||||||||| ||||||||| | ||||
seq2  TACATTATTTCTGATAAAAATGTAAGAAAACTATAGGAAAAAATGTGGTT  158

seq1  AAAATGGATGAAATTGATGGAAAAACAGGCTGTACAAATGGAAAACTTAG  8199
      |||||||||||||||||||| |||||||||||| ||||||||||||||||
seq2  AAAATGGATGAAATTGATGGGAAAACAGGCTGTTCAAATGGAAAACTTAG  208

seq1  AAAATTCATCTTCACTATTTGCAAAAGCAGAGATCATCATATTACGATAA  8249
      ||||||||| |||||||||||||||||||||||||||||||||| ||| |
seq2  AAAATTCATGTTCACTATTTGCAAAAGCAGAGATCATCATATTATGATGA  258

seq1  AATAAAAGATTATATTCGAATGTATTTGTGACAAAATTTAAAAAAAATAT  8299
      |||||||||||||||||||||| |||||||||||||||   |||||||||
seq2  AATAAAAGATTATATTCGAATGCATTTGTGACAAAATT--GAAAAAATAT  306

seq1  TTTAAATA-GTGTTAAAATGGAAATATTAGAGTGAAAAAACACCGGGTAA  8348
      |||||| | ||||||||||||||||| |||| ||||||||||||||||||
seq2  TTTAAAAATGTGTTAAAATGGAAATAATAGA-TGAAAAAACACCGGGTAA  355

seq1  AGAGGAAAACGTAGAAAACATATTCTTTTTCATTAGACAAAAAGGAGAGA  8398
      |||||| |||||||||||||||||||||||||||||| ||||||||||| 
seq2  AGAGGACAACGTAGAAAACATATTCTTTTTCATTAGAGAAAAAGGAGAGC  405

seq1  AACATTTTCTGATAAATTTCGAGATGTTCTTATACACTATTTCTGATAAA  8448
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AACATTTTCTGATAAATTTCGAGATGTTCTTATACATTATTTCTGATAAA  455

seq1  AGTGAAAACTGTACAGAAAAATGTGGTTAAAATGGAGGAAATTGATTGAA  8498
      |||||||||  ||| ||||||||||||||||||||||||||||| |||||
seq2  AGTGAAAAC--TACGGAAAAATGTGGTTAAAATGGAGGAAATTGTTTGAA  503

seq1  AAAGCGATTGGTCAAATCGAAAATGGAGAAAACTCATGTTCACTATGTGA  8548
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AAAGCGATTGGTGAAATCGAAAATGGAGAAAACTCATGTTCACTATGTGA  553

seq1  GAAAGCAGAGGTCATCATTGTAAGATAGGGGAGTGGGAGGGAG  8591
      |||||||||||||||||||||||||||||||||||||||| ||
seq2  GAAAGCAGAGGTCATCATTGTAAGATAGGGGAGTGGGAGGCAG  596

BAC Information

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BAC

BAC End Information

Alignment Information