BAC Information

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BAC

Clone NameB6Ng01-181D22
ChromosomeX (Build37)
Map Location 44,018,375 - 44,019,572
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040075, Actrt1, EG245405, LOC665632
Downstream geneEG434775, LOC236775, LOC100040133, LOC100040145
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-181D22.bB6Ng01-181D22.g
ACCGA007458GA007459
length1,2121,175
definitionB6Ng01-181D22.b B6Ng01-181D22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaataaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctatctcttgtgagactatgccggggtctagcaaac
acagaagtggatgctcacagtcagctaatgggatggatcatagggctccc
aatggaggagctagagaaagtagccaaggagctaaagggatctgcaaccc
ttataggtggaacaacattatgaactaaccagtaccccggagttcttgac
tctagctgcataatatatcaaaagatggccctagtcgggcaatcactgca
gagaggccattgggactggcaaccttatatgcccagtacaggggaactca
ggccaaaatggggaagggctgggcacgcactgggtagctcgcataaagct
ggactcaattag

gaattcaaagaccatagaaaaaagttactatattgagaaattatgaaatt
tatccctctttttcttactttaaggtcaatttttataatggcaaagtaga
taaagttgtaataattttaggaagtcaggtccaatatatatgattatgga
attgtatgtatgtacatgtgtatgtgtgtgactgtacacacatttgtgat
acatacagttgaccagcagattttatgggtttaattacgtggctatattt
tcatcagatactttgtctaataatcactgagtgtaaaattatctgattaa
atggattgttcttgtcctgaaccaggacatatagtggtgttttttcagta
tgcttgttgaaataaaacttgagaagttaacaaaaaattccagcatatca
gagaagaagccaaggttattagattattatagacaatattattgcccaga
aaacatagcaataccctatagttgagatccctgaaaacactactgtttga
aattcaatctactgagtcagaaatatctcctatcatatggtctccattct
tcaatgtcacaatatgacatacgtcaatgtcaaatgcctcagcctgaaaa
gtgctaacagcagaataattgtacatatgcatacaaagtttcactctact
gagcatcattagtagagagacttgttgaaaaatatttcttctccaaatac
tggctcagtttgtcgtgatgccacaaaccttccatacatgtgaaaatcgt
ttctaaaccatgccttttaaatcaagattaaaggtagcccattacctgaa
atagctaacatcttaatgtgggggtagttatggaacagtttttgctatca
catgacagaccagagcaccaaatatggtaaacaaattagctaaagagaat
attcaaaatatgaaactttacctaagcagaggtaatattaaaaagtaagg
aacttgttgctcagtaattgtttgaaagtctagaagaacagaagaggtgg
aacatcccatatagtaactgaaaagggatataattaccatcctgtgctca
gctagaaaatatggtaagtgaaatgtacagggttagagaagtctacaata
ttttctcttatggtgacctgggagctgatggacctcaatgctgggccatc
taaagataagcaaccttggaactga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_44018375_44019572
seq2: B6Ng01-181D22.g_64_1238

seq1  GAATTCAAAGACCATAGAAAAAAGTTACTATATTGAGAAATTATGAAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGACCATAGAAAAAAGTTACTATATTGAGAAATTATGAAATT  50

seq1  TATCCCTCTTTTTCTTACTTTAAGGTCAATTTTTATAATGGCAAAGTAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCCTCTTTTTCTTACTTTAAGGTCAATTTTTATAATGGCAAAGTAGA  100

seq1  TAAAGTTGTAATAATTTTAGGAAGTCAGGTCCAATATATATGATTATGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTTGTAATAATTTTAGGAAGTCAGGTCCAATATATATGATTATGGA  150

seq1  ATTGTATGTATGTACATGTGTATGTGTGTGACTGTACACACATTTGTGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTATGTATGTACATGTGTATGTGTGTGACTGTACACACATTTGTGAT  200

seq1  ACATACAGTTGACCAGCAGATTTTATGGGTTTAATTACGTGGCTATATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACAGTTGACCAGCAGATTTTATGGGTTTAATTACGTGGCTATATTT  250

seq1  TCATCAGATACTTTGTCTAATAATCACTGAGTGTAAAATTATCTGATTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCAGATACTTTGTCTAATAATCACTGAGTGTAAAATTATCTGATTAA  300

seq1  ATGGATTGTTCTTGTCCTGAACCAGGACATATAGTGGTGTTTTTTCAGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATTGTTCTTGTCCTGAACCAGGACATATAGTGGTGTTTTTTCAGTA  350

seq1  TGCTTGTTGAAATAAAACTTGAGAAGTTAACAAAAAATTCCAGCATATCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGTTGAAATAAAACTTGAGAAGTTAACAAAAAATTCCAGCATATCA  400

seq1  GAGAAGAAGCCAAGGTTATTAGATTATTATAGACAATATTATTGCCCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGAAGCCAAGGTTATTAGATTATTATAGACAATATTATTGCCCAGA  450

seq1  AAACATAGCAATACCCTATAGTTGAGATCCCTGAAAACACTACTGTTTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATAGCAATACCCTATAGTTGAGATCCCTGAAAACACTACTGTTTGA  500

seq1  AATTCAATCTACTGAGTCAGAAATATCTCCTATCATATGGTCTCCATTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAATCTACTGAGTCAGAAATATCTCCTATCATATGGTCTCCATTCT  550

seq1  TCAATGTCACAATATGACATACGTCAATGTCAAATGCCTCAGCCTGAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGTCACAATATGACATACGTCAATGTCAAATGCCTCAGCCTGAAAA  600

seq1  GTGCTAACAGCAGAATAATTGTACATATGCATACAAAGTTTCACTCTACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTAACAGCAGAATAATTGTACATATGCATACAAAGTTTCACTCTACT  650

seq1  GAGCATCATTAGTAGAGAGACTTGTTGAAAAATATTTCTTCTCCAAATAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATCATTAGTAGAGAGACTTGTTGAAAAATATTTCTTCTCCAAATAC  700

seq1  TGGCTCAGTTTGTCGTGATGCCACAAACCTTCCATACATGTGAAAATCGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCAGTTTGTCGTGATGCCACAAACCTTCCATACATGTGAAAATCGT  750

seq1  TTCTAAACCATGCCTTTTAAATCAAGATT-AAGGTAGCCCATTACCTGAA  799
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TTCTAAACCATGCCTTTTAAATCAAGATTAAAGGTAGCCCATTACCTGAA  800

seq1  ATAGCTAACATCTTAATGTGGGGGTAGTTATGGAACAGTTTTTGCTATCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTAACATCTTAATGTGGGGGTAGTTATGGAACAGTTTTTGCTATCA  850

seq1  CATGACAGACCAGAGCACCAAATATGGTAAACAAATTAGCTAAAGAGAAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACAGACCAGAGCACCAAATATGGTAAACAAATTAGCTAAAGAGAAT  900

seq1  ATTCAAAATATGAAACTTTACCTAAGCAGAGGTAATATTAAAAAGTAAGG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAAATATGAAACTTTACCTAAGCAGAGGTAATATTAAAAAGTAAGG  950

seq1  AACTTGTTGCTCAGTTATTGTTTGAAAGTCCTAGAAGAACAGAAGAGGTG  999
      ||||||||||||||| ||||||||||||| ||||||||||||||||||||
seq2  AACTTGTTGCTCAGTAATTGTTTGAAAGT-CTAGAAGAACAGAAGAGGTG  999

seq1  GAACATCCCATATAGTAACTGAAAAGGGATATAAATTACCATCTGTTGCT  1049
      |||||||||||||||||||||||||||||||| ||||||||||   ||| 
seq2  GAACATCCCATATAGTAACTGAAAAGGGATAT-AATTACCATCCTGTGC-  1047

seq1  TCAGGCTTAAGGAAAAATTATGGTAAGTGAAATGTACAGGGGTTAGAGAA  1099
      ||| |||     | ||| |||||||||||||||||||| |||||||||||
seq2  TCA-GCT-----AGAAAATATGGTAAGTGAAATGTACA-GGGTTAGAGAA  1090

seq1  GTCTACAAATATTTTCTC-TAT-GTGAATTGGGAGTGGATGGGGAACTTT  1147
      |||||| ||||||||||| ||| ||||  ||||||  |||||   || | 
seq2  GTCTAC-AATATTTTCTCTTATGGTGACCTGGGAGCTGATGG---ACCT-  1135

seq1  ACAAATGCTGGGGCATATCTTAGAAAGATAAGCAACCTTGAACAGAACTG  1197
         ||||||||| ||| |     |||||||||||||||||    ||||||
seq2  --CAATGCTGGGCCATCT-----AAAGATAAGCAACCTTG----GAACTG  1174

seq1  A  1198
      |
seq2  A  1175


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