BAC Information

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BAC

Clone NameB6Ng01-181H23
ChromosomeX (Build37)
Map Location 73,174,557 - 73,353,731
singlet/doubletdoublet
Overlap geneEG635295, LOC667537
Upstream geneEG667446, LOC669291, Gab3, Dkc1, Mpp1, EG547412, 4930428E23Rik, EG667190, F8, LOC572559, LOC667218, Fundc2, Mtcp1, Brcc3, LOC667496, Vbp1, Rab39b, EG635243, Pls3, LOC635275
Downstream geneLOC385472, LOC100041147, EG238829, Magea7, 4930428D18Rik, EG544974, 4930468A15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-181H23.bB6Ng01-181H23.g
ACCGA007643GA007644
length9741,002
definitionB6Ng01-181H23.b B6Ng01-181H23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(73,353,131 - 73,353,731)(73,174,557 - 73,175,550)
sequence
gaattcttcatgcacgattactgtttttgcatcatttctttcctgccagc
tcctcctatgtcacccccaaactacttttcaaattcctgacctcttctat
tgttacacacacacacacacacacacacacttatagacttgtcttatttt
gagggctgaacacttaggcttagggtggtataacctgctgccaattcata
tgaactaaactgctgatatcctgacaaaaccaattgcatttactccaaaa
agctatttctaaacaggtccacttcctctgaatcctaataactttttccc
ccgctacctctggagggtggtaggctagaaagaaggttagaataattaaa
aacccttattaaaaacataaacctatacacaggtctcatttatttacagc
aaccatactgttgagacttcgtgaatgctccttccctgtccagtctagtg
aggggggccatgcagatgccagacagggaagtaaaacacatgaaaagatg
agaatggaaagcacgtgcaggttgacttagggaacctggctcagacttca
ggtagtgtaagtaacatcaggcagttagctgtcagcatatttaaaacaca
gcacaatttggggaaagtttccaggcaacaatcagtgcagtcaaggtgca
aaataaaactgaaggcgtaattacatagaaacgctaagtacatgtgacca
tgagtgtgggttctacagcttaaaggcctagaatctactgtggattctga
ccacttgcacagagattagcagggcagaaagtaaatgtgacatcccctat
aaagataggaatggtctcgggagaaaagagtctgaaatatttattctggg
gaattagattgaggtctgtcactacagatagcaaaaaggtcaccatatca
tgaataacctacactctcagcttaccagatggtatgcactttattttgat
tttattctaattcattgaggagaa
gaattctttcatttgaagtgttcttggtcccttgcatcctcatttattgg
agagctttttatacccatatgagcaaggtcaggatgcccttgtaattttt
tgcttccttgttcccatttcctttgtttctctctctctctctctctctct
ctctctctctctctctctcctcttcctccattctatctctctctcttaaa
tataatatttgtgatttatttttctgagtgtgttacacatttatacaaac
aaactttgatatttacttcctttaacctttagctcctctcttgttctcct
actcctttctccttcatattttaatatcccttaaaacttataaattatgg
atgttttttctgcatgtacatcaacataccacgtacatacttggtgccac
aggagggtagaatagggcattaaatcctctgagactggagttacagatag
ttgtgtaccgccatgttggtgttgggaactaaatctaggtcctttgcaaa
gcagctcagtgcttttacttaccgagtcagctctccaacttcttctacta
atgtttctttttctttctcctcttttcttctcctgtcctgtactgtcttc
tctctctctctctccctctttctgtctctctctccctctctttgtcttcc
tgtctctctgtgtctctgtctctgtctctgagacagggtttctctgtgtt
gccctggctgtttgtggaactctatctgtagaccaggctggccttgatct
cagatttgcatgcttctgccctcctgagagctgggatttaagtcattgtg
ccacccacctggctttctactaaagttcttattaccacttacctgatcag
ttcctatgaaattaatttgacatcttaatggtttgcacctcatacaagac
tttctattttactatggtgccctgaatttgtttcaagttaagtgctcaaa
taatcccttttaacttgactttcaaatatggggaattactgggttgggat
tg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_73353131_73353731
seq2: B6Ng01-181H23.b_45_645 (reverse)

seq1  CTGTGTTTTAAATATGCTGACAGCTAACTGCCTGATGTTACTTACACTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTTTTAAATATGCTGACAGCTAACTGCCTGATGTTACTTACACTAC  50

seq1  CTGAAGTCTGAGCCAGGTTCCCTAAGTCAACCTGCACGTGCTTTCCATTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGTCTGAGCCAGGTTCCCTAAGTCAACCTGCACGTGCTTTCCATTC  100

seq1  TCATCTTTTCATGTGTTTTACTTCCCTGTCTGGCATCTGCATGGCCCCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTTTTCATGTGTTTTACTTCCCTGTCTGGCATCTGCATGGCCCCCC  150

seq1  TCACTAGACTGGACAGGGAAGGAGCATTCACGAAGTCTCAACAGTATGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTAGACTGGACAGGGAAGGAGCATTCACGAAGTCTCAACAGTATGGT  200

seq1  TGCTGTAAATAAATGAGACCTGTGTATAGGTTTATGTTTTTAATAAGGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTAAATAAATGAGACCTGTGTATAGGTTTATGTTTTTAATAAGGGT  250

seq1  TTTTAATTATTCTAACCTTCTTTCTAGCCTACCACCCTCCAGAGGTAGCG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATTATTCTAACCTTCTTTCTAGCCTACCACCCTCCAGAGGTAGCG  300

seq1  GGGGAAAAAGTTATTAGGATTCAGAGGAAGTGGACCTGTTTAGAAATAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAAAAAGTTATTAGGATTCAGAGGAAGTGGACCTGTTTAGAAATAGC  350

seq1  TTTTTGGAGTAAATGCAATTGGTTTTGTCAGGATATCAGCAGTTTAGTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGGAGTAAATGCAATTGGTTTTGTCAGGATATCAGCAGTTTAGTTC  400

seq1  ATATGAATTGGCAGCAGGTTATACCACCCTAAGCCTAAGTGTTCAGCCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAATTGGCAGCAGGTTATACCACCCTAAGCCTAAGTGTTCAGCCCT  450

seq1  CAAAATAAGACAAGTCTATAAGTGTGTGTGTGTGTGTGTGTGTGTGTAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATAAGACAAGTCTATAAGTGTGTGTGTGTGTGTGTGTGTGTGTAAC  500

seq1  AATAGAAGAGGTCAGGAATTTGAAAAGTAGTTTGGGGGTGACATAGGAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAAGAGGTCAGGAATTTGAAAAGTAGTTTGGGGGTGACATAGGAGG  550

seq1  AGCTGGCAGGAAAGAAATGATGCAAAAACAGTAATCGTGCATGAAGAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGCAGGAAAGAAATGATGCAAAAACAGTAATCGTGCATGAAGAATT  600

seq1  C  601
      |
seq2  C  601

seq1: chrX_73174557_73175550
seq2: B6Ng01-181H23.g_67_1068

seq1  GAATTCTTTCATTTGAAGTGTTCTTGGTCCCTTGCATCCTCATTTATTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCATTTGAAGTGTTCTTGGTCCCTTGCATCCTCATTTATTGG  50

seq1  AGAGCTTTTTATACCCATATGAGCAAGGTCAGGATGCCCTTGTAATTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTTTTTATACCCATATGAGCAAGGTCAGGATGCCCTTGTAATTTTT  100

seq1  TGCTTCCTTGTTCCCATTTCCTTTGTTTCTCTCTCTCTCTCTCTCTCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCCTTGTTCCCATTTCCTTTGTTTCTCTCTCTCTCTCTCTCTCTCT  150

seq1  CTCTCTCTCTCTCTCTCTCCTCTTCCTCCATTCTATCTCTCTCTCTTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCCTCTTCCTCCATTCTATCTCTCTCTCTTAAA  200

seq1  TATAATATTTGTGATTTATTTTTCTGAGTGTGTTACACATTTATACAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATATTTGTGATTTATTTTTCTGAGTGTGTTACACATTTATACAAAC  250

seq1  AAACTTTGATATTTACTTCCTTTAACCTTTAGCTCCTCTCTTGTTCTCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTTGATATTTACTTCCTTTAACCTTTAGCTCCTCTCTTGTTCTCCT  300

seq1  ACTCCTTTCTCCTTCATATTTTAATATCCCTTAAAACTTATAAATTATGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTTTCTCCTTCATATTTTAATATCCCTTAAAACTTATAAATTATGG  350

seq1  ATGTTTTTTCTGCATGTACATCAACATACCACGTACATACTTGGTGCCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTTTTCTGCATGTACATCAACATACCACGTACATACTTGGTGCCAC  400

seq1  AGGAGGGTAGAATAGGGCATTAAATCCTCTGAGACTGGAGTTACAGATAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGGTAGAATAGGGCATTAAATCCTCTGAGACTGGAGTTACAGATAG  450

seq1  TTGTGTACCGCCATGTTGGTGTTGGGAACTAAATCTAGGTCCTTTGCAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTACCGCCATGTTGGTGTTGGGAACTAAATCTAGGTCCTTTGCAAA  500

seq1  GCAGCTCAGTGCTTTTACTTACCGAGTCAGCTCTCCAACTTCTTCTACTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTCAGTGCTTTTACTTACCGAGTCAGCTCTCCAACTTCTTCTACTA  550

seq1  ATGTTTCTTTTTCTTTCTCCTCTTTTCTTCTCCTGTCCTGTACTGTCTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTCTTTTTCTTTCTCCTCTTTTCTTCTCCTGTCCTGTACTGTCTTC  600

seq1  TCTCTCTCTCTCTCCCTCTTTCTGTCTCTCTCTCCCTCTCTTTGTCTTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCCCTCTTTCTGTCTCTCTCTCCCTCTCTTTGTCTTCC  650

seq1  TGTCTCTCTGTGTCTCTGTCTCTGTCTCTGAGACAGGGTTTCTCTGTGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTCTGTGTCTCTGTCTCTGTCTCTGAGACAGGGTTTCTCTGTGTT  700

seq1  GCCCTGGCTG-TTGTGGAACTCTATCTGTAGACCAGGCTGGCCTTGATCT  749
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGGCTGTTTGTGGAACTCTATCTGTAGACCAGGCTGGCCTTGATCT  750

seq1  CAGATTTGCATGCTTCTG-CCTCCTGAGAGCTGGGATTAAAGTCATTGTG  798
      |||||||||||||||||| ||||||||||||||||||| |||||||||||
seq2  CAGATTTGCATGCTTCTGCCCTCCTGAGAGCTGGGATTTAAGTCATTGTG  800

seq1  CCA-CCACCTGGC-TTCTACTAAAGTTCTTATTACCACTTACCTGATCAG  846
      ||| ||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CCACCCACCTGGCTTTCTACTAAAGTTCTTATTACCACTTACCTGATCAG  850

seq1  TTCCTATGAAATTAATTTGACATCTTAATGGTTTGCACCTCATTACAAGA  896
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TTCCTATGAAATTAATTTGACATCTTAATGGTTTGCACCTCA-TACAAGA  899

seq1  CTT--CAATTTACTATGGTGCCCTG-ATTTGTTTCAAAGTTAAGTGCTCA  943
      |||   | ||||||||||||||||| ||||||||| ||||||||||||||
seq2  CTTTCTATTTTACTATGGTGCCCTGAATTTGTTTC-AAGTTAAGTGCTCA  948

seq1  AATAAT-CCTTTTAACTTGACTTTCAGATATGGGG-ATTACTGGG-TGGG  990
      |||||| ||||||||||||||||||| |||||||| ||||||||| ||||
seq2  AATAATCCCTTTTAACTTGACTTTCAAATATGGGGAATTACTGGGTTGGG  998

seq1  ATTG  994
      ||||
seq2  ATTG  1002