BAC Information

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BAC

Clone NameB6Ng01-182E13
ChromosomeX (Build37)
Map Location 61,250,505 - 61,251,590
singlet/doubletsinglet
Overlap genenone
Upstream geneEG627420
Downstream geneLOC666729, EG627470, 3830417A13Rik, Slitrk4, LOC100040011
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-182E13.bB6Ng01-182E13.g
ACCGA008218GA008219
length1,1381,087
definitionB6Ng01-182E13.b B6Ng01-182E13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaactcttttatcatgaatggatgttggattttg
tcaaatgctttctcagcatctaacgcgatgatcatgtggtttttgtcttt
gagtttgtttatatactggattacattgatggatttccgtatattgaacc
atccctgcatccctgggctgaaacctacttggtcaggatggatgattgtt
ttgatgtgttcttgtattcggttagcaagaactttattgtggatttttgc
atcgatattcataagggaaattggtctgaagttctctatctttgttgggt
gtttttgtggtttagttatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctatcttgtggaatagtttgtgaagaactgg
aattagatcttctttgaaggtctgatagaactctgcacaaaattgtctgg
tcctgggctttttttgggtgggagactattaataactgcttctatttctt
taggggatatgggactatttagatggtcaactttatcctaattcaacttt
ggtacctggtatctgtccagaaatttgtccatttcgtccaggttttccag
ttttgttgagtatagccttttgtagaaggatctgatggtgttttggattt
cttcaggatctgttgttatgtctcccttttcatttctgattttgttaatt
aggatgctttccctgtgccctctagtgagtctggctaagggtttatctat
cttgttgattttctcaaagaaccagctccttgattggttgattctttgaa
cagttcttcttgtttccacttggttgatttcacccctgagtttgattatt
tcctgctgtctactcctcttgggtgaatttgcttccttttcttctagatg
ttttagtgtgttgtcaagctgcttatgtgtgctctctctagtttcttttt
ggagacactcagagctatgagtttccctcttaggaatgcttcatgggtcc
cataagtctgggttaggtgtggcttatttcataactctgaaaggtattaa
ttcttttctttattccttcctggaccaggtatcatgagaagtaggtcgtt
cagttttctgctgtgtaagtgtagggcttcactaacta

gaattcttttaagatcataattaaaacttaagaagtcatttatctgtcta
tgtaacatcactacaagacagtacatcttcagagctctgcagagacctgc
cccaaaggggtggactaatacctagttattgttatatatgtttgttaata
acaggaaagcatattaatagcaggaatctttcctaaagtaatttttctta
gatcttgtcttataaaagcacatctgtcaaaataaaatattaaaataaaa
taaataaaaaattaaaaaataataaaaaaagcaaatctctcatagattaa
tcagaagaagattatcttaggaagatcacttgttagttattagcttgcac
tagtatggctcctgacagcctccttttagaacagcatatttttttaacta
tctttttaacatccttagtcttaaggagcttccctaaaatatggaagttt
ttaaattaagaaaaagctgttgagcaaccaacagtttatacatgtatacc
cttatctccttctaaataattatctaagtatcatcacatactcttgtaaa
tattcatactgtgattataagaattgtttgcatattagtcttattggaga
gtagaggagtcatccagcttctaatgggagactggaggtcctttaaagca
atgtttttgatggaaacactggagacattgtggtaataatagtcaattat
ccattatttattgaacatttatgtatactaaaggtgctgaaggctttgtg
tgctcagtcttattcaatttttcccacattccatgggatctgggagcttt
tataatccttttttatatataaatgaaaactgacatttttacagaactcc
ttattcacaaaaatcatttatcacatacttatttggaatttagtgtttct
gcattattttactaagaagagatcaatactaacatcagtgttttaaaata
ttgagtattttattaagtggcaattgcatgtttaagcactgaactaagtg
cttcattatgtatttgttcaattatgattttcttgtttcacatttgtggt
agctactgactacatctaccttgtaagtgtccagaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_61250505_61251590
seq2: B6Ng01-182E13.g_64_1150 (reverse)

seq1  TTTCTGGACACCTACAGGGTAAGAATGTAGTCAGTAGCTACCACAAAATG  50
      ||||||||||| |||| ||||   |||||||||||||||||||| |||||
seq2  TTTCTGGACACTTACAAGGTA--GATGTAGTCAGTAGCTACCAC-AAATG  47

seq1  TTGAAACAAGAAAATCATAATTGAACAAATACATAATGAAGCACTTAGTT  100
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TGAAACAAGAAAATCATAATTGAACAAATACATAATGAAGCACTTAGTT  96

seq1  CAGTGCTT-AACATGCAATTGCCACTTAAT-AAATACTCAATATTTTAAA  148
      |||||||| ||||||||||||||||||||| |||||||||||||||||||
seq2  CAGTGCTTAAACATGCAATTGCCACTTAATAAAATACTCAATATTTTAAA  146

seq1  ACACTGATGTTAGTATTGATCTCTTCTTAGT-AAATAATGCAGAAACACT  197
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ACACTGATGTTAGTATTGATCTCTTCTTAGTAAAATAATGCAGAAACACT  196

seq1  AAATTCCAAATAAGTATGTGATAAATGATTTTTGTGAATAAGGAGTTCTG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCCAAATAAGTATGTGATAAATGATTTTTGTGAATAAGGAGTTCTG  246

seq1  T-AAAATGTCAGTTTTCATTTATATATAAAAAAGGATTATAAAAGCTCCC  296
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATGTCAGTTTTCATTTATATATAAAAAAGGATTATAAAAGCTCCC  296

seq1  AGAT-CCATGGAATGTGGGAAAAATTGAATAAGACTGAGCACACAAAGCC  345
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCCCATGGAATGTGGGAAAAATTGAATAAGACTGAGCACACAAAGCC  346

seq1  TTCAGCACCTTTAGTATACATAAATGTTCAATAAATAATGGATAATTGAC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCACCTTTAGTATACATAAATGTTCAATAAATAATGGATAATTGAC  396

seq1  TATTATTACCACAATGTCTCCAGTGTTTCCATCAAAAACATTGCTTTAAA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTACCACAATGTCTCCAGTGTTTCCATCAAAAACATTGCTTTAAA  446

seq1  GGACCTCCAGTCTCCCATTAGAAGCTGGATGACTCCTCTACTCTCCAATA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCTCCAGTCTCCCATTAGAAGCTGGATGACTCCTCTACTCTCCAATA  496

seq1  AGACTAATATGCAAACAATTCTTATAATCACAGTATGAATATTTACAAGA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTAATATGCAAACAATTCTTATAATCACAGTATGAATATTTACAAGA  546

seq1  GTATGTGATGATACTTAGATAATTATTTAGAAGGAGATAAGGGTATACAT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTGATGATACTTAGATAATTATTTAGAAGGAGATAAGGGTATACAT  596

seq1  GTATAAACTGTTGGTTGCTCAACAGCTTTTTCTTAATTTAAAAACTTCCA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAAACTGTTGGTTGCTCAACAGCTTTTTCTTAATTTAAAAACTTCCA  646

seq1  TATTTTAGGGAAGCTCCTTAAGACTAAGGATGTTAAAAAGATAGTTAAAA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTAGGGAAGCTCCTTAAGACTAAGGATGTTAAAAAGATAGTTAAAA  696

seq1  AAATATGCTGTTCTAAAAGGAGGCTGTCAGGAGCCATACTAGTGCAAGCT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATGCTGTTCTAAAAGGAGGCTGTCAGGAGCCATACTAGTGCAAGCT  746

seq1  AATAACTAACAAGTGATCTTCCTAAGATAATCTTCTTCTGATTAATCTAT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACTAACAAGTGATCTTCCTAAGATAATCTTCTTCTGATTAATCTAT  796

seq1  GAGAGATTTGCTTTTTTTATTATTTTTTAATTTTTTATTTATTTTATTTT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGATTTGCTTTTTTTATTATTTTTTAATTTTTTATTTATTTTATTTT  846

seq1  AATATTTTATTTTGACAGATGTGCTTTTATAAGACAAGATCTAAGAAAAA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTTATTTTGACAGATGTGCTTTTATAAGACAAGATCTAAGAAAAA  896

seq1  TTACTTTAGGAAAGATTCCTGCTATTAATATGCTTTCCTGTTATTAACAA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTTAGGAAAGATTCCTGCTATTAATATGCTTTCCTGTTATTAACAA  946

seq1  ACATATATAACAATAACTAGGTATTAGTCCACCCCTTTGGGGCAGGTCTC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATATAACAATAACTAGGTATTAGTCCACCCCTTTGGGGCAGGTCTC  996

seq1  TGCAGAGCTCTGAAGATGTACTGTCTTGTAGTGATGTTACATAGACAGAT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAGCTCTGAAGATGTACTGTCTTGTAGTGATGTTACATAGACAGAT  1046

seq1  AAATGACTTCTTAAGTTTTAATTATGATCTTAAAAGAATTC  1086
      |||||||||||||||||||||||||||||||||||||||||
seq2  AAATGACTTCTTAAGTTTTAATTATGATCTTAAAAGAATTC  1087


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