BAC Information

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BAC

Clone NameB6Ng01-183G08
ChromosomeX (Build37)
Map Location 63,810,705 - 63,811,246
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC671840
Downstream geneSlitrk2, LOC666824, LOC627734, EG666828
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-183G08.bB6Ng01-183G08.g
ACCGA009032GA009033
length954929
definitionB6Ng01-183G08.b B6Ng01-183G08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttctatgatttttatcatgaatgggtgttggattttt
ttcaaatgctttctcagtatctaaggagatgatcatgtggtttttgtctt
tgagtttgtttatatagtggactacattgatggatttctgaatattaaac
tatccctgtatctctagaattaagcctacttgatcacgttggatgacttt
ttttgttgttgttggattgaattcggtttgcaagaatttgattgagtatt
tttgcattgatactcataagggaaattggtctgaagttcgctttctttgc
tgggtatttgtgtggtttaggttagagtaattgtggcttcatagaataaa
ttgggtagaacaccttctgtttctattttatgaaatagtttgaggagaat
tggaattatgtcttctttgaaggtctgatagaactctgcactaaacccat
ctgatctagggctttttttgttgggagactattaatgactgcttctattt
ttttagggtatatgggaatgtttagaaaattaatctgatccgtatttaac
tttggtacctgttgtctgtctagtaagttgtccatttcatccaggttttc
cagttttgttgagtatagcttttgtagtaggatctgaagatgctttggat
ttcctcaagttctgttgttatgtctccctttttcatttctgattttgtta
atttcagatactgtccctgtgccctctagttaggctggctaagggtttat
ctatcttgttgattttctcaaaaaaataaaataaaataaataaaaacagc
tcctggtttggttgattcttgtatagttcttttttctttccacttggttg
atttcagcccttgagtttgactattacctgctgtctacttgctcctgggt
gaaatttgcttccttaaggtctagagcttcaaggttgcagtcattgcgct
gtgt

gaattctcacctgaggaatactgaatggctgagaagcacctgaaaaaatg
ttcagcacccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcataccagtcagaatgggtaagatcaaaaactcaggtgacagc
agatgctggcgaggatgtggagaaagaggaatactcctctattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
aaaaattggacatagtactaccggaggatcctgcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgcttcactat
gttcatagcagccttatttataacatccagaagctggaaagaacccaggt
gtccctcaacagaggaatagatacagaaaatgtggtacatttgcacaatg
gagtactactcagctattaaaaagaatttatgaaatttctaggcaaatgc
atggacctggagggcatcatcctgagtgaggtaacccaatcacaaaagaa
ctcacatgatatgtactcactgataaatggatattagcccagaaacttag
aatacccaagatacaagatacaatttacaaaacacatgaaactcaagaag
atcttaaggtgcttacagtgatatatgtatatgtgtgtgttttgtgtgtg
tgtgtgtatcggtgtgtatgcatacatatgtatactatgaatacatacct
cattacctattcatatatctcactatatacatgtatcctatacgcataga
aaaacacatatacatatatcttttgtcttatgtcatgtcaatgtctatat
ttgtattttgcaattacttccatgtctgaaatgaatcataggctaaattg
ctatatttttctcaaatattcagtttagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_63810705_63811246
seq2: B6Ng01-183G08.g_451_995 (reverse)

seq1  ACTAAACTGAATATTTTGAGAAAAATATAGCAATTTTAGCCTATGA-TCA  49
      ||||||||||||| ||||||||||||||||||| |||||||||||| |||
seq2  ACTAAACTGAATA-TTTGAGAAAAATATAGCAA-TTTAGCCTATGATTCA  48

seq1  TTTCAG-CATGTGACGT-ATTGCAAAATACAAATATAGACATTGACATAG  97
      |||||| |||| || || |||||||||||||||||||||||||||||| |
seq2  TTTCAGACATG-GAAGTAATTGCAAAATACAAATATAGACATTGACAT-G  96

seq1  ACAT-AGAC-AAAGATATATGTATATGTG-TTTTCTATGCGTATAGGATA  144
      |||| |||| ||||||||||||||||||| ||||||||||||||||||||
seq2  ACATAAGACAAAAGATATATGTATATGTGTTTTTCTATGCGTATAGGATA  146

seq1  CATGTATATAGTGAGATATATGAATAGGTAATGAGGTATGTATTCATAGT  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTATATAGTGAGATATATGAATAGGTAATGAGGTATGTATTCATAGT  196

seq1  ATACATATGTATGCATACACACCGATACACACACACACAC-AAACACACA  243
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  ATACATATGTATGCATACACACCGATACACACACACACACAAAACACACA  246

seq1  CATATACATATATCACTGTAAGCACCTTAAGATCTTCTTGAGTTTCATGT  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATACATATATCACTGTAAGCACCTTAAGATCTTCTTGAGTTTCATGT  296

seq1  GTTTTGTAAATTGTATCTTGTATCTTGGGTATTCTAAGTTTCTGGGCTAA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTAAATTGTATCTTGTATCTTGGGTATTCTAAGTTTCTGGGCTAA  346

seq1  TATCCATTTATCAGTGAGTACATATCATGTGAGTTCTTTTGTGATTGGGT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCATTTATCAGTGAGTACATATCATGTGAGTTCTTTTGTGATTGGGT  396

seq1  TACCTCACTCAGGATGATGCCCTCCAGGTCCATGCATTTGCCTAGAAATT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCACTCAGGATGATGCCCTCCAGGTCCATGCATTTGCCTAGAAATT  446

seq1  TCATAAATTCTTTTTAATAGCTGAGTAGTACTCCATTGTGCAAATGTACC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAATTCTTTTTAATAGCTGAGTAGTACTCCATTGTGCAAATGTACC  496

seq1  ACATTTTCTGTATCTATTCCTCTGTTGAGGGACACCTGGGTTCTTTCCA  542
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTCTGTATCTATTCCTCTGTTGAGGGACACCTGGGTTCTTTCCA  545


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