BAC Information

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BAC

Clone NameB6Ng01-188J02
ChromosomeX (Build37)
Map Location 86,775,864 - 86,776,176
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667891, EG245506, LOC667911, LOC100041707, EG436213, LOC667919, LOC100041727, LOC667934, Pet2, EG629419
Downstream gene4932429P05Rik, LOC633246, Nanog-ps1, 4930415L06Rik, EG547215, Gm370, LOC194615
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-188J02.bB6Ng01-188J02.g
ACCGA012836GA012837
length4421,196
definitionB6Ng01-188J02.b B6Ng01-188J02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
ttgatatttccatggcttttatcatgaagaagtgttggatttttgtcaaa
tgctttctcagtatctaatgaaataatcaagtgatttttgtctttaagtt
tgtttataaagcggattacgttgctggatttccatatattaaaccacccc
tgcatccttgggatgaagcctacttgatcatgatggatgatcattttgat
gttttcttggattcagtttgttaggattttattgagtataattgaataga
tattcataagggaatttttctaaagttctccttctttgttgcatctttgt
gtggttaaggtatcaaagtaattgtggcttcattcaatgaattgggtaca
gtatattctgtttctatttttttaaaaatagtttgagcagaattggaatt
aggtcttctttgaaggtctgatagaactctgcactaaaccca

gaattctcaccagaggaataccgaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagaaaaatacaaatgaaacaaccctgaaatt
ccgtcttacaccagtcagaatggctaagatcaaaaattcaggtgacagca
gatgctggtgagaatgtggagaaagaggaacactcttccattgttggtgg
gattgcaagcttgtacaaccactctggaaatcagtctggcatttcctcag
aatattggacatagtactacaggagaatcccgcaataccacttctgggca
tatatccagaagatgtcctaaccagtaagaagtacacatgctccactatg
ttcatagcagccttatttataatagccagaagctggaaagaacccagatg
cccctcaacagaggaatggatacagaaaatgtggtacatttacacaatga
agtactactcagctattaaaaagaatgaatttgtgaaattcctaggcaaa
tggttggacctggagggcatcatcctgagtgaggtaacacaatcacaaaa
aactcaaataatatgtactcactgataaatggatattagcccagaaactt
agtatacccgaaagttataagatacaatttgcaaaacacatgaaactgaa
gaagaagaccaaagtgtggacactttgccccttcttagaattggaaacaa
tcacccaaggaaggagttacaaagacaaagtttgtagctgaaacaaaagg
atggactatctagagacttccataatcagggatccatcccataattagcc
tccaaacggtgacaccaatgtatacactagcaagcgttttgttgcaggac
tgtgatatagctgtctcttgtgagagtaggccagggcctagcaaacacaa
aagtggatgttcacagtcaacttattggatagatcacagggcccccaatg
gaagagctaggagaaagtattcaaggagcttaaggagatctgcaacctgt
aggtgcaacacaattatgaactaaccagtacccttggagcttttgactct
tagctgcattattgtatcaaaaaatggcctagtagccaatcactgggaaa
gaacaggccatttggaacagggctacattatgcctagttacaggaacgct
agtccataaatgggcgtatgggggtcgtgattgagtatgtagtctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_86775864_86776176
seq2: B6Ng01-188J02.b_177_494 (reverse)

seq1  TGGGTTTAGTGCAGAGTTCTATCAGACCTTCAAAGAAGATCTAATTCCAG  50
      ||||||||||||||||||||||||||||||||||||||| ||||||||| 
seq2  TGGGTTTAGTGCAGAGTTCTATCAGACCTTCAAAGAAGACCTAATTCCAA  50

seq1  TTCTGCACAAACTA--TTCCACAAAATAGAAGTAGAAGGTACTCTACCCA  98
      |||||| |||||||  ||  | |||||||||  ||||  |||| ||||||
seq2  TTCTGCTCAAACTATTTTTAAAAAAATAGAAACAGAATATACTGTACCCA  100

seq1  ACTCATTCTATTAATCCACAATTACTCTGATACCTAAACTACAGAAAGTT  148
      | |||||  || || ||||||||||| |||||||| ||| ||| |||| |
seq2  ATTCATTGAATGAAGCCACAATTACTTTGATACCTTAACCACACAAAGAT  150

seq1  ----CCAAGATAGAGAACTTTAGACCAATTTCCCTTTTGAATATAGATGC  194
          | ||||  ||||||||||||  || ||||||| |||||||  || |
seq2  GCAACAAAGAAGGAGAACTTTAGA-AAAATTCCCTTATGAATATCTATTC  199

seq1  AAAAATACTCAGTAAAATTCTCGCCAACCGAATCCCAGAACACATCAAAA  244
      ||  ||||||| |||||| ||  | ||| |||||| |||| |||||||||
seq2  AATTATACTCAATAAAATCCTAACAAACTGAATCCAAGAAAACATCAAAA  249

seq1  CAATCATCTATCATGACCAAATTGGTTTTATTCCAGGGTTGCAGGGATGG  294
        |||||| ||||||| ||| | || || || ||| || ||||||| |||
seq2  TGATCATCCATCATGATCAAGTAGGCTTCATCCCAAGGATGCAGGGGTGG  299

seq1  TTTAATATATGGAAATCCA  313
      |||||||||||||||||||
seq2  TTTAATATATGGAAATCCA  318


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