BAC Information

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BAC

Clone NameB6Ng01-190D17
ChromosomeX (Build37)
Map Location 152,911,073 - 152,912,220
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667394, Ptchd1
Downstream gene4930503H13Rik, LOC640803, LOC434885, Phex, Gm1947, Sms
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-190D17.bB6Ng01-190D17.g
ACCGA014039GA014040
length1,1441,174
definitionB6Ng01-190D17.b B6Ng01-190D17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttccatgaatctcatgtatggttttccctatctctagctcttt
tccttatccacccctcaaggtagccattctcctaaacaatatagtaactt
ttctctccatttttttcttatacttgtatggtgtatcttaaataatggaa
atgcactataggaatatttgtgtaattttctcttgcattctaggttctgt
ttattacaatctgctgtgtttaaatgcatagacttcatgatttcactttt
ctgttgtattgcattattatatatatgattcataacactttcaatatcaa
tgggtagtttacaaagcattgtgcctaatatttttactgatatttctttt
ttaaaaatgtacaaatatttttctgaactctcaacccaaattgtagtgga
ctgattcatgttcatgatgtagagaacagaaatcataactgacatgcagc
atttgaaggactcatcttttgatgactgttatctatctttttcagaattt
ggcagaattacttcaaaagacgtcaaatgatgaatatttacaagcgtttt
tgatattttattttatgttttgcagatttgtactacaaaatccctttagt
atacatgcatgtgtatgtatgcctgtgtgtgtacatgcacacatgtacat
gtatgtatctctgtacacaggagcatattgttgaggtactaaaattgtaa
gggaaggcagagttggatgttgaacctccatcttcctttcagtcactttt
caacatgacacagtatcatgttaagggaaatatgtcaatattatatcaat
ttctttactgttgtgtttacgcacattaatataaaccaactatattagtt
gttaaaagctattttattatcaatttttcttcagaagataattttccact
tttggattttatgtttacccctttcatcttatttcttaggctgtgatagg
aaaatataagtacctactttttacttcagtttgaaaaattactcaagatg
atataatttcaaatattagaaacacatagtaaagagaaaaatgagacaaa
atattagggaataaaaaaaatgatgcaggtaacgaataaaatgatatttt
ggagtacttattttctagtgaatgatagtacctaaaaaattacc

gaattcatacagttgaatccttcttaacagtctgctttacgggaaccttt
attaccgcgacccgcagttctggttctggaatgagggatcttccttgcgc
cagtcccgagttttttctcgtcccggaattcggcaccaattgttattaga
cgcgttctcacgaccggccaggaaagacgcaacaaaccagaatcttctgc
ggcaaaactttattgcttacatcttcaggagcaagagtgtaagaagcaag
agagagagaaaacgaaaccccgtccctattaaggagaattatccttcgcc
taggacgtgtcactccctgattggctgcagcccatcggccgagttgacgt
cacggggaaggcagagcacatggagtgaagaaccaccctcggcacatgcg
cagattatttgtttaccacttagaacacagctgtcagcgccatcttgtaa
cggcgaatgtgggcgcggctcccaacaatcaggaatcaacaaatgggacc
tcataaaattgcaaagcttctgtaagccaaaggacactgtcaataagacc
aaaaggcaaccaacagattgggaaaagatctttaccaatcctaaatctga
tagggagttaaaatccaatatatataaagaactcaagaagttggactcca
gaaaaccaaacaaccctattaaaacatggggtacagagatgcacaaagaa
ttctcaactgaggaataccaaatggctgagaagcacctaaaaaatgttca
acattcttaatcaacagggaaatgcaaatcaaaccaacctttcgattcca
ccttacaccagtcataatggctaagatcaaaaactcatgtgacagcagag
gctggtgaggatgtggagaaagagcaacactcctccattgctggtgggat
tgcaaactggtacaaccactctggaaatcagtgtgctccagatccatccc
tctgaaaattggatatagttctactgaagatccagcataccactcctggc
atatactagatatgctcacatattattaggacatatgatcactatatcat
agcagccttgtgttataataggcaggaggctggaagaaccagatgtccct
cacgagatgggatacgaatgtgatacattcaccaatggagataccacctc
agcctattaaaaacacatgtggat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_152911073_152912220
seq2: B6Ng01-190D17.b_47_1190

seq1  GAATTCTTTCCATGAATCTCATGTATGGTTTTCCCTATCTCTAGCTCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCCATGAATCTCATGTATGGTTTTCCCTATCTCTAGCTCTTT  50

seq1  TCCTTATCCACCCCTCAAGGTAGCCATTCTCCTAAACAATATAGTAACTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTATCCACCCCTCAAGGTAGCCATTCTCCTAAACAATATAGTAACTT  100

seq1  TTCTCTCCATTTTTTTCTTATACTTGTATGGTGTATCTTAAATAATGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCCATTTTTTTCTTATACTTGTATGGTGTATCTTAAATAATGGAA  150

seq1  ATGCACTATAGGAATATTTGTGTAATTTTCTCTTGCATTCTAGGTTCTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACTATAGGAATATTTGTGTAATTTTCTCTTGCATTCTAGGTTCTGT  200

seq1  TTATTACAATCTGCTGTGTTTAAATGCATAGACTTCATGATTTCACTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTACAATCTGCTGTGTTTAAATGCATAGACTTCATGATTTCACTTTT  250

seq1  CTGTTGTATTGCATTATTATATATATGATTCATAACACTTTCAATATCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGTATTGCATTATTATATATATGATTCATAACACTTTCAATATCAA  300

seq1  TGGGTAGTTTACAAAGCATTGTGCCTAATATTTTTACTGATATTTCTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTAGTTTACAAAGCATTGTGCCTAATATTTTTACTGATATTTCTTTT  350

seq1  TTAAAAATGTACAAATATTTTTCTGAACTCTCAACCCAAATTGTAGTGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAATGTACAAATATTTTTCTGAACTCTCAACCCAAATTGTAGTGGA  400

seq1  CTGATTCATGTTCATGATGTAGAGAACAGAAATCATAACTGACATGCAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTCATGTTCATGATGTAGAGAACAGAAATCATAACTGACATGCAGC  450

seq1  ATTTGAAGGACTCATCTTTTGATGACTGTTATCTATCTTTTTCAGAATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAAGGACTCATCTTTTGATGACTGTTATCTATCTTTTTCAGAATTT  500

seq1  GGCAGAATTACTTCAAAAGACGTCAAATGATGAATATTTACAAGCGTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAATTACTTCAAAAGACGTCAAATGATGAATATTTACAAGCGTTTT  550

seq1  TGATATTTTATTTTATGTTTTGCAGATTTGTACTACAAAATCCCTTTAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATTTTATTTTATGTTTTGCAGATTTGTACTACAAAATCCCTTTAGT  600

seq1  ATACATGCATGTGTATGTATGCCTGTGTGTGTACATGCACACATGTACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATGCATGTGTATGTATGCCTGTGTGTGTACATGCACACATGTACAT  650

seq1  GTATGTATCTCTGTACACAGGAGCATATTGTTGAGGTACTAAAATTGTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTATCTCTGTACACAGGAGCATATTGTTGAGGTACTAAAATTGTAA  700

seq1  GGGAAGGCAGAGTTGGATGTTGAACCTCCATCTTCCTTTCAGTCACTTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGGCAGAGTTGGATGTTGAACCTCCATCTTCCTTTCAGTCACTTTT  750

seq1  CAACATGACACAGTATCATGTTAAGGGAAATATGTCAATATTATATCAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATGACACAGTATCATGTTAAGGGAAATATGTCAATATTATATCAAT  800

seq1  TTCTTTACTGTTGTGTTTACGCACATTAATATAAACCAACTATATTAGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTACTGTTGTGTTTACGCACATTAATATAAACCAACTATATTAGTT  850

seq1  GTTAAAAGCTATTTTATTATCAATTTTTCTTCAGAAGATAATTTTCCACT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAAAGCTATTTTATTATCAATTTTTCTTCAGAAGATAATTTTCCACT  900

seq1  TTTGGATTTTATGTTTACCCCTTTCATCTTATTTCTTAGGCTGTGATAGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGATTTTATGTTTACCCCTTTCATCTTATTTCTTAGGCTGTGATAGG  950

seq1  AAAATATAAGTACCTACTTTTTACTTCAGTTTGAAAAATTACTCAAGATG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATAAGTACCTACTTTTTACTTCAGTTTGAAAAATTACTCAAGATG  1000

seq1  ATATAATTTCAAATATTAGAAACACATAGTAAAGAGAAAAATGAAGAACA  1050
      ||||||||||||||||||||||||||||||||||||||||||||   |||
seq2  ATATAATTTCAAATATTAGAAACACATAGTAAAGAGAAAAATGA--GACA  1048

seq1  AAATATTAAGGGATAAAAAAAATGAATGCAGGTAACGAATAAAAATGAAT  1100
      |||||||| || |||||||||||| ||||||||||||||| |||||| ||
seq2  AAATATTAGGGAATAAAAAAAATG-ATGCAGGTAACGAAT-AAAATG-AT  1095

seq1  ATTTT-GAGTACTTA-TTTCTAGTGATGAATAAGTACCTTAAAAAATACC  1148
      ||||| ||||||||| ||||||||||   || ||||||| ||||| ||||
seq2  ATTTTGGAGTACTTATTTTCTAGTGAATGAT-AGTACCTAAAAAATTACC  1144


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