BAC Information

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BAC

Clone NameB6Ng01-193B01
ChromosomeX (Build37)
Map Location 95,471,316 - 95,472,481
singlet/doubletsinglet
Overlap geneAr
Upstream geneEda2r, LOC668244
Downstream geneLOC100042324, Ophn1, Yipf6, LOC100042932, Stard8, LOC436219, Efnb1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-193B01.bB6Ng01-193B01.g
ACCGA016141GA016142
length1,1711,143
definitionB6Ng01-193B01.b B6Ng01-193B01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaaaggctgagaaacacctgaaaaaatg
ttgaacatccttagtcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcaaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttccccc
gaaaattggacatagtactactagaggatccagcactacctctcctgggc
atatatccagaagatgtcccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaaaaaggaactcac
acaatatgtactcactgatacgtggatattagcccagaaacttaggatac
ccaagatataagatacaacttgccaaacgcatgaaattcaagaagaatga
agaccaaagtgtggacactttgtcccgtcttacaactgggaacaaaacac
ccatggaaggagttacagagacaaaatttggagctgtgaccaaaggatgg
accatctagtgattgccatatgcagggatccatcccataatcagctttcc
aaatgctgacaccattgcatacactagcaagattttgctgaaaggaccca
gatatagctgtctcttgtgagactatgccggggcctagcaaacacagaag
ttgatgatcacagtcagctattggatgggtccacacgggcccctatgagg
agctagagaaattacccaggagctaagggacctgcaacctatagttgaac
aactattatgaacttatccagtacccgggagcccttgacctctagctgcc
tattgtataaagatgacctagtccggctaacctcggcaacgagagtccat
tgccagctaacgttatatgttccgatcactggaattgccctggcccaaag
actggtaatgctgagatagcg
gaattctttgtctgataattcttccaagtcatttttattagttgtcattg
ttgtgggataattgacttataaagaagacatgctgtcttgattttttttt
cctttcagttttttgagatgggatttctttctataacactggctgtactg
gagcttgcttcataaaccaggttacacttgaattcagagatttgcctgcc
tctacctcctgggtgccaagatcaaagacatgcaccaccacccttggctg
tctcatttgaggggggtttcttactggaatttatgcatctagaattagtt
tttgattggatcttttattctgtcatatgttttgttttgttttaattttc
aattctggccacctttgttcactgttctgttcactacatgactaagtcct
aatataattgaagttacctttgctttgtgggtctgattggtacttaggaa
gaaggctctatctcaactcttcctctgatgataagatattgccttgctat
atagcatctccaacctagacctacacaattcctggtgagttatggacccc
ttcacatatttgtgagacttactcaaaatcagatcaaatctctaccctgg
atccccagcaaccactgggacttcttgcagatgtgaaacttccactttct
tgtgggcaccttcaaccaagggtgcttctacaaaatgtgacacttaacca
agttctgatagacctcatgaaggtttaggatagtttttctgtatgactcc
agatttagcttgctaatattttgttcaggtattaccctttgatcataaga
attagtctatagtttactacttgtactatgtttgtcttggattgttaatt
gagtaacatttattattataaaatgaattgggaagttgttactatttctt
ttcattagctgttttgttgaaaatttaatgtgagattcttaaacatttca
taagaaatcttctagttaaaaaaaaaggaaaatggtctgggatgctgttt
gactagtattcatatcttttactcataagtcaattgatgtttaaatttgt
tctagcagttaggtattgtatcttaattaggtcttgatcaataaattaag
ttcccatactggataaatacatttaagatactgtcagagaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_95471316_95472481
seq2: B6Ng01-193B01.g_62_1204

seq1  GAATTCTTTGTCTGATAATTCTTCCAAGTCATTTTTATTAGTTGTCATTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTCTGATAATTCTTCCAAGTCATTTTTATTAGTTGTCATTG  50

seq1  TTGTGGGATAATTGACTTATAAAGAAGACATGCTGTCTTGATTTTTTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGGATAATTGACTTATAAAGAAGACATGCTGTCTTGATTTTTTTTT  100

seq1  CCTTTCAGTTTTTTGAGATGGGATTTCTTTCTATAACACTGGCTGTACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCAGTTTTTTGAGATGGGATTTCTTTCTATAACACTGGCTGTACTG  150

seq1  GAGCTTGCTTCATAAACCAGGTTACACTTGAATTCAGAGATTTGCCTGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTTGCTTCATAAACCAGGTTACACTTGAATTCAGAGATTTGCCTGCC  200

seq1  TCTACCTCCTGGGTGCCAAGATCAAAGACATGCACCACCACCCTTGGCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCTCCTGGGTGCCAAGATCAAAGACATGCACCACCACCCTTGGCTG  250

seq1  TCTCATTTGAGGGGGGTTTCTTACTGGAATTTATGCATCTAGAATTAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATTTGAGGGGGGTTTCTTACTGGAATTTATGCATCTAGAATTAGTT  300

seq1  TTTGATTGGATCTTTTATTCTGTCATATGTTTTGTTTTGTTTTAATTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATTGGATCTTTTATTCTGTCATATGTTTTGTTTTGTTTTAATTTTC  350

seq1  AATTCTGGCCACCTTTGTTCACTGTTCTGTTCACTACATGACTAAGTCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTGGCCACCTTTGTTCACTGTTCTGTTCACTACATGACTAAGTCCT  400

seq1  AATATAATTGAAGTTACCTTTGCTTTGTGGGTCTGATTGGTACTTAGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAATTGAAGTTACCTTTGCTTTGTGGGTCTGATTGGTACTTAGGAA  450

seq1  GAAGGCTCTATCTCAACTCTTCCTCTGATGATAAGATATTGCCTTGCTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCTCTATCTCAACTCTTCCTCTGATGATAAGATATTGCCTTGCTAT  500

seq1  ATAGCATCTCCAACCTAGACCTACACAATTCCTGGTGAGTTATGGACCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCATCTCCAACCTAGACCTACACAATTCCTGGTGAGTTATGGACCCC  550

seq1  TTCACATATTTGTGAGACTTACTCAAAATCAGATCAAATCTCTACCCTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACATATTTGTGAGACTTACTCAAAATCAGATCAAATCTCTACCCTGG  600

seq1  ATCCCCAGCAACCACTGGGACTTCTTGCAGATGTGAAACTTCCCACTTTC  650
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  ATCCCCAGCAACCACTGGGACTTCTTGCAGATGTGAAACTT-CCACTTTC  649

seq1  TTGTGGGCACCTTCAACCAAGGGTGCTTCTACAAAATGTGACACTTAACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGGCACCTTCAACCAAGGGTGCTTCTACAAAATGTGACACTTAACC  699

seq1  AAGTTCTGATAGACCTCATGAAGGTTTAGGATAGTTTTTCTGTATGACTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCTGATAGACCTCATGAAGGTTTAGGATAGTTTTTCTGTATGACTC  749

seq1  CAGATTTAGCTTGCTAATATTTTGTTCAGGTATTACCCTTTGATCATAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTTAGCTTGCTAATATTTTGTTCAGGTATTACCCTTTGATCATAAG  799

seq1  AATTAGTCTATAGTTTACTACTTGTACTATGTTTGTCTTGGATTGTTAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGTCTATAGTTTACTACTTGTACTATGTTTGTCTTGGATTGTTAAT  849

seq1  TGAGTAACA-TTATTATTATAAAATGAATTGGGAAGTTGTTACTA-TTCT  898
      ||||||||| ||||||||||||||||||||||||||||||||||| ||||
seq2  TGAGTAACATTTATTATTATAAAATGAATTGGGAAGTTGTTACTATTTCT  899

seq1  TTTCATAAGCTGTTT--GTGAAAAATTAATGTGAGATCTTTAAACATTTC  946
      |||||| ||||||||   |||||| ||||||||||||  |||||||||||
seq2  TTTCATTAGCTGTTTTGTTGAAAATTTAATGTGAGATTCTTAAACATTTC  949

seq1  AT-AGAAATC-TCTAGTTAAAAAAAAA-GAAAATGGTTCTGGGATGCTGT  993
      || ||||||| |||||||||||||||| |||||||| |||||||||||||
seq2  ATAAGAAATCTTCTAGTTAAAAAAAAAGGAAAATGG-TCTGGGATGCTGT  998

seq1  TTGACTAGTAATTCAATATC-TTTACTCATTAAAGGTCAAATTTGATGTT  1042
      ||||||||| |||| ||||| |||||||||   | |||||  |||||| |
seq2  TTGACTAGT-ATTC-ATATCTTTTACTCAT---AAGTCAA--TTGATG-T  1040

seq1  TTAAATTTGTTTTTAGCCAGTTTAAGTAATTTGTATCTTTATAATAATGT  1092
      ||||||||| || ||| ||| ||| |||  ||||||||   |||| | ||
seq2  TTAAATTTG-TTCTAG-CAG-TTAGGTA--TTGTATCT---TAATTAGGT  1082

seq1  CTTGATTAAATAATTAAAGTTCCCATATATTTGGATTAAATACATATTTA  1142
      ||||| | ||||| | |||||||||||    |||| |||||||  |||||
seq2  CTTGA-TCAATAAATTAAGTTCCCATA---CTGGA-TAAATAC--ATTTA  1125

seq1  TAGATATTTACAGGACAGAGAAGG  1166
       ||||| |     | |||||||||
seq2  -AGATACT-----GTCAGAGAAGG  1143