BAC Information

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BAC

Clone NameB6Ng01-195G03
ChromosomeX (Build37)
Map Location 76,951,306 - 77,081,221
singlet/doubletdoublet
Overlap genenone
Upstream gene4921509A18Rik, LOC667700, EG546337, EG629116, LOC636082, EG667736, LOC100041373, EG636104, 2410003J06Rik, LOC667749
Downstream geneLOC211702, LOC667755, LOC211705, LOC654474, LOC629153, LOC546338, LOC100042229, LOC667776, EG629182
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-195G03.bB6Ng01-195G03.g
ACCGA017821GA017822
length9121,094
definitionB6Ng01-195G03.b B6Ng01-195G03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,951,306 - 76,952,213)(77,080,114 - 77,081,221)
sequence
gaattctttgtttagctctgagccccatttttaatggggttatttgattt
tctggagtccatcttcttcaccttcttgagttctttatatatatataaat
atattggatattagtcctctatctgttttaggataggtaaagatcctatc
ccaatctgttggtggcctttttgtctaattgacagtatcttttgccttac
agaagttttgcagtttcatcatttggtgttttaaaggttttttttttttt
tttttttttttttttttttttttttttttttttttgacagggtttctttg
tgtagccctggctgtcctggaattccctctataaacaagggtggccttga
acttaaaaatctgcctgcctctgcttcccaagtgctgggattaaaggggt
gccccccccctgcccagctgttttaaagtttgaatgtttcttggcataaa
tatctggccccatctctgtttgtgagtgttctgttctttggttactattg
cctattctgtatcttacacaaatgtggtggctatgggattcctaataaag
tctgttctgttagttggtggatgtccgaaatgaatccagataggataaaa
ggaaatggtgaaaggggcagcagaaaagaaaaaggcagagagaccactcc
atgccaagatacagagccacccggggaatgaaggtaggctgtttaagaaa
actctctctttcacttttatgtatgtatgtatactataaatgcaatctct
gcatgaaaactggatttggatatttggttttccttcctactcattgatat
tcatggataaattcatttagtttcaaaatcttgaaattgtttgtggaaat
tctcaaagcttgaaagtagatctaccatattgacttagctctactctttg
ttggcatttgtc

gaattccacttgtgcaggttttttcactatgcccagaggaatagcataat
caggtatttactaacggacccttgatggtgggtgtaacaataaattagca
ttgtatcagagcattcacctggctcctgtgtttagctgatcttaattagg
gttgttcctattctcagttgtaaacacggcctggctcccgccatcttttt
atgtatacattttcattgttttgtgttaagaacaagtgtaccttgacata
ttcgcctagccttcttgtttttcttctgtattaaaagcctggtgtttact
tggacaaaatacatccagattcagcactcccttttgtatgtgtccatttg
tcaattctcgccaactctttgcccacttgtctggaaccttgattccccac
ggattaagagaggccaactgagtccggtccatggcaacccaatatatatt
ctactcatcagtactccatggggccttaattcatcctcctttctctaggc
agacactttcttcccataggagatactagaaactcctctggtcattgtca
tcaaaactgttatccatgaaagtcttatgatatgacagattagaagctac
tgttgtatgaatggataaaatactatgcatataataaagctaaagaatat
gaagtcagattctcccggcagataagccaaaccactggaattaagctgca
acatactgctcttcctaccatgagggtcacaggtgttaccatggaaatgt
tttcataagatgttgctgtaaaagccagagtgaaagggtgggctgaagaa
atatagctagagttttggataaggaatccagggaacacaaggcaaaaaga
aaaaaaaaagatcagattttagagatagatgtgaactttgtgaataggat
cctgagaccaagagatttttcacaaagcaagtaatttcccttttccaagt
cattgctttatcacgttagaaagaagtaatgctttgtggaaactgttcac
agtcttcacagcacacaaatgtaacttcaattaggagactctcatttcag
agcccatcatggaaagccttgcgtagaaagctcagtccaaatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_76951306_76952213
seq2: B6Ng01-195G03.b_41_952

seq1  GAATTCTTTGTTTAGCTCTGAGCCCCATTTTTAATGGGGTTATTTGATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTTAGCTCTGAGCCCCATTTTTAATGGGGTTATTTGATTT  50

seq1  TCTGGAGTCCATCTTCTTCACCTTCTTGAGTTCTTTATATATATATAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAGTCCATCTTCTTCACCTTCTTGAGTTCTTTATATATATATAAAT  100

seq1  ATATTGGATATTAGTCCTCTATCTGTTTTAGGATAGGTAAAGATCCTATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGGATATTAGTCCTCTATCTGTTTTAGGATAGGTAAAGATCCTATC  150

seq1  CCAATCTGTTGGTGGCCTTTTTGTCTAATTGACAGTATCTTTTGCCTTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATCTGTTGGTGGCCTTTTTGTCTAATTGACAGTATCTTTTGCCTTAC  200

seq1  AGAAGTTTTGCAGTTTCATCATTTGGTGTTTTAAAGGTTTTTTTTTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTTTTGCAGTTTCATCATTTGGTGTTTTAAAGGTTTTTTTTTTTTT  250

seq1  TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGACAGGGTTTCTTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGACAGGGTTTCTTTG  300

seq1  TGTAGCCCTGGCTGTCCTGGAATTCACTCTATAGACAAGGCTGGCCTTGA  350
      ||||||||||||||||||||||||| ||||||| |||||| |||||||||
seq2  TGTAGCCCTGGCTGTCCTGGAATTCCCTCTATAAACAAGGGTGGCCTTGA  350

seq1  ACTTAGAAATCTGCCTGCCTCTGCTTCCCAAGTGCTGGGATTAAAGGCGT  400
      ||||| ||||||||||||||||||||||||||||||||||||||||| ||
seq2  ACTTAAAAATCTGCCTGCCTCTGCTTCCCAAGTGCTGGGATTAAAGGGGT  400

seq1  GCACCACCACTGCCCAGCTGTTTTAAAGTTTGAATGTTTCTTGGCATAGA  450
      || || || ||||||||||||||||||||||||||||||||||||||| |
seq2  GCCCCCCCCCTGCCCAGCTGTTTTAAAGTTTGAATGTTTCTTGGCATAAA  450

seq1  TATCTGGCCTCATCTCTGTTTGTGAGTGTTCTGTTCTTTGGTTACTATTG  500
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGGCCCCATCTCTGTTTGTGAGTGTTCTGTTCTTTGGTTACTATTG  500

seq1  CCTATTCTGTATCTTACACAAATGTGGTGGCTATGGGATTCCTAGTAAAG  550
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CCTATTCTGTATCTTACACAAATGTGGTGGCTATGGGATTCCTAATAAAG  550

seq1  TCTGTTCTGTTAGTTGGTGGATGTCAGAAATGAATCAAGATAGGATAAAA  600
      ||||||||||||||||||||||||| |||||||||| |||||||||||||
seq2  TCTGTTCTGTTAGTTGGTGGATGTCCGAAATGAATCCAGATAGGATAAAA  600

seq1  GGAAATGGTGAAAGGGGCAGCAGAAAAGAAAAAGGCAGAGAGACCACTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATGGTGAAAGGGGCAGCAGAAAAGAAAAAGGCAGAGAGACCACTCC  650

seq1  ATGCCAAGATACAGAGCCA-CCAGGGAATGAAGGTAGGCTG-TTAAGAGA  698
      ||||||||||||||||||| || |||||||||||||||||| |||||| |
seq2  ATGCCAAGATACAGAGCCACCCGGGGAATGAAGGTAGGCTGTTTAAGAAA  700

seq1  ACTCTCT-TTTCACTTTTATGTATGTATGTATACTATAAATGCAATCTCT  747
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCTCTTTCACTTTTATGTATGTATGTATACTATAAATGCAATCTCT  750

seq1  GCATGAAAACTGGATTT-GATATTT-GTTTTCCTTCCTACTCATTGATAT  795
      ||||||||||||||||| ||||||| ||||||||||||||||||||||||
seq2  GCATGAAAACTGGATTTGGATATTTGGTTTTCCTTCCTACTCATTGATAT  800

seq1  TCATGGATAAAATTCATTTAGTTTCAAAATCTTGAAATTG-TTGTGGAAA  844
      |||||||| ||||||||||||||||||||||||||||||| |||||| ||
seq2  TCATGGAT-AAATTCATTTAGTTTCAAAATCTTGAAATTGTTTGTGG-AA  848

seq1  ATTCTCAAAAGGCTGAAAGTAGATCTACCATA-TGACTTAGCTCTAACTC  893
      |||||| ||||  ||||||||||||||||||| |||||||||||| ||||
seq2  ATTCTC-AAAGCTTGAAAGTAGATCTACCATATTGACTTAGCTCT-ACTC  896

seq1  -TTGTTGGCATATGTC  908
       |||||||||| ||||
seq2  TTTGTTGGCATTTGTC  912


seq1: chrX_77080114_77081221
seq2: B6Ng01-195G03.g_65_1158 (reverse)

seq1  ATATTTTTGGGACTGAGCTTTTCCTACGCAAAGCTTTCCATGATTGGGGC  50
      ||||||   ||||||||||||  |||||||| ||||||||||||  ||||
seq2  ATATTT---GGACTGAGCTTT--CTACGCAAGGCTTTCCATGAT--GGGC  43

seq1  TCTGGAAATGAGGAAGTTCTTCTTATTGAAGTTTACATTTGTGTGCTGTG  100
      ||| ||||||||  || ||| || ||||||| ||||||||||||||||||
seq2  TCT-GAAATGAG--AG-TCTCCTAATTGAAG-TTACATTTGTGTGCTGTG  88

seq1  AAGACTGTGGAACAGTTTCCACAAAGCATTACTTCCTTTCTAACGTGATA  150
      |||||||| ||||||||||||||||||||||||| |||||||||||||||
seq2  AAGACTGT-GAACAGTTTCCACAAAGCATTACTT-CTTTCTAACGTGATA  136

seq1  AAGCAATGACTTGGAAAAGGG-AATTACTTGCTTTGTGAAAAATCTCTTG  199
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AAGCAATGACTTGGAAAAGGGAAATTACTTGCTTTGTGAAAAATCTCTTG  186

seq1  GTCTCAGGATCCTATTCACAAAGTTCACATCTATCTCTAAAATCTGATCT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GTCTCAGGATCCTATTCACAAAGTTCACATCTATCTCTAAAATCTGATC-  235

seq1  TTTTTTTTTTCTTTTTGCCTTGTGTTCCCTGGATTCCTTATCCAAAACTC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTCTTTTTGCCTTGTGTTCCCTGGATTCCTTATCCAAAACTC  285

seq1  TAGCTATATTTCTTCAGCCCACCCTTTCACTCTGGCTTTTACAGCAACAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTATATTTCTTCAGCCCACCCTTTCACTCTGGCTTTTACAGCAACAT  335

seq1  CTTATGAAAACATTTCCATGGTAACACCTGTGACCCTCATGGTAGGAAGA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGAAAACATTTCCATGGTAACACCTGTGACCCTCATGGTAGGAAGA  385

seq1  GCAGTATGTTGCAGCTTAATTCCAGTGGTTTGGCTTATCTGCCGGGAGAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTATGTTGCAGCTTAATTCCAGTGGTTTGGCTTATCTGCCGGGAGAA  435

seq1  TCTGACTTCATATTCTTTAGCTTTATTATATGCATAGTATTTTATCCATT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACTTCATATTCTTTAGCTTTATTATATGCATAGTATTTTATCCATT  485

seq1  CATACAACAGTAGCTTCTAATCTGTCATATCATAAGACTTTCATGGATAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACAACAGTAGCTTCTAATCTGTCATATCATAAGACTTTCATGGATAA  535

seq1  CAGTTTTGATGACAATGACCAGAGGAGTTTCTAGTATCTCCTATGGGAAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTTGATGACAATGACCAGAGGAGTTTCTAGTATCTCCTATGGGAAG  585

seq1  AAAGTGTCTGCCTAGAGAAAGGAGGATGAATTAAGGCCCCATGGAGTACT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGTCTGCCTAGAGAAAGGAGGATGAATTAAGGCCCCATGGAGTACT  635

seq1  GATGAGTAGAATATATATTGGGTTGCCATGGACCGGACTCAGTTGGCCTC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGTAGAATATATATTGGGTTGCCATGGACCGGACTCAGTTGGCCTC  685

seq1  TCTTAATCCGTGGGGAATCAAGGTTCCAGACAAGTGGGCAAAGAGTTGGC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAATCCGTGGGGAATCAAGGTTCCAGACAAGTGGGCAAAGAGTTGGC  735

seq1  GAGAATTGACAAATGGACACATACAAAAGGGAGTGCTGAATCTGGATGTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATTGACAAATGGACACATACAAAAGGGAGTGCTGAATCTGGATGTA  785

seq1  TTTTGTCCAAGTAAACACCAGGCTTTTAATACAGAAGAAAAACAAGAAGG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCCAAGTAAACACCAGGCTTTTAATACAGAAGAAAAACAAGAAGG  835

seq1  CTAGGCGAATATGTCAAGGTACACTTGTTCTTAACACAAAACAATGAAAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGCGAATATGTCAAGGTACACTTGTTCTTAACACAAAACAATGAAAA  885

seq1  TGTATACATAAAAAGATGGCGGGAGCCAGGCCGTGTTTACAACTGAGAAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATACATAAAAAGATGGCGGGAGCCAGGCCGTGTTTACAACTGAGAAT  935

seq1  AGGAACAACCCTAATTAAGATCAGCTAAACACAGGAGCCAGGTGAATGCT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACAACCCTAATTAAGATCAGCTAAACACAGGAGCCAGGTGAATGCT  985

seq1  CTGATACAATGCTAATTTATTGTTACACCCACCATCAAGGGTCCGTTAGT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATACAATGCTAATTTATTGTTACACCCACCATCAAGGGTCCGTTAGT  1035

seq1  AAATACCTGATTATGCTATTCCTCTGGGCATAGTGAAAAAACCTGCACAA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACCTGATTATGCTATTCCTCTGGGCATAGTGAAAAAACCTGCACAA  1085

seq1  GTGGAATTC  1108
      |||||||||
seq2  GTGGAATTC  1094


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