BAC Information

Click to search

BAC

Clone NameB6Ng01-195J11
ChromosomeX (Build37)
Map Location 75,839,539 - 75,840,554
singlet/doubletsinglet
Overlap genenone
Upstream geneTbl1x, EG628893, LOC667606, Prkx, Pbsn, OTTMUSG00000017866, LOC100042001, 5430402E10Rik, LOC628976, Obp1a, EG546335, EG628991, LOC236874, EG667658, 4930480E11Rik, EG667672, Prrg1
Downstream geneLOC667679, LOC667684, 4921509A18Rik, LOC667700, EG546337, EG629116, LOC636082, EG667736, LOC100041373, EG636104
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-195J11.bB6Ng01-195J11.g
ACCGA017970GA017971
length1,0221,207
definitionB6Ng01-195J11.b B6Ng01-195J11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctataaatatatgttgtagtttgtgattcattttaagatatttta
agaaatatgtgtattgaattcctgaacaatatgaaaatttaagaaattca
atctctatataagttacagttacagttatataacaaatctctttattatg
aaaccaaaaaaaactttttacattcttctaattcaataaatgtattttct
ttaaaaactttcataccatcagaatattgggggaatagcataatgaacta
taatccagattctaccaataccaagtaaggttacttgccttattatatct
gtccagttacccatttctcctttctttctctatttttttttttgagtttt
gtatgtgaactatcccccaaagatttaagtacttgagaatttttcacatt
gtggtagtataagaggtgataaaaacaaccattaggtatgacctcaggat
ggagtaatgcaattctcctaagacccagcctagttttccaatggattgat
atgtagcataatcttggctccagaatgcttatagatttgttttttatcgt
gtggcagcttattttcacatgtggtttgattatgatgtgatgtgctatgt
tgtggtttggccaaaggggccatcagagaagatacttctgaaccttcagg
atggtgagataaaggggtcatctctttctccttatttttgcatttttcta
atgttaattaatttatgttaattttaatgatgttgggggcattttcatgt
tccctagtcatttcctttcatatctacaattcaactttttagtatttttg
tcaacttaaaattgttcatactttgtttttctattattgtgaattacaaa
cattatccatgtgtattaataccagtatgttgtcagatatgtattttttc
aaatgttttcaccagtgtgggaaaatgttacttttcttttctgaaaatat
tgatggactaatgtttttctctttttttagtatagttacctggagcagaa
cttaagcctgattgatatgcac
gaattctcacctgaggaataccgaatggctgagaagcagctgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaccaaccctgagat
tccacctcacatcagtcagaatggctaagatcaaaaattcagatgacagc
agatgctggattggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaaccttgtacaaccactctggaaatcagtttggcggttcctca
gaaaattggacatagtactacaggacgatcccccaatatctctcctgggc
gtatatccagaagatgttccaaatggtaagaaggacacttgctccactat
gttcatagcagccttatttataatagccaggaactggaaagaacccagat
gtccctcaacagaggaatggatacagaaaatgttgtacattcacataatg
gagtactattcagttattataaagaatgaatttatgaaattcctaggcaa
atgtatggacctggagggcatcatcctgagtgaggtaacccaatcagaaa
agaactcacataacatgtacacactgataagtggatactagcccagaaac
ttagaatacccatgatataagatacaatttgctaaacacatgaaactcaa
gaagaacgaagactaaagtgtggacactttgccccttcttagaagtggga
acaaaacacccatggaaggagttacagaaacaaagtttggagctgagatg
aaaggatggaccatgtagagactgccatatccagggatccaccccataat
cagcatccaaacgctgacaccatttgcatatactagcaagatttttatcg
aaagggacccagatgtagctgtctcttgtgagactatgccggggcctagc
aaacacaggaagtggatgctcacaatcagctaatggatggatcaacaggg
ctcccattggaggagctagagaagttacccaaggagctaaagggatcttc
acctttatagtggaacacatttatgaacttacccagtacccctgagcttc
tttgactcttagcctgcatatgtattccaaagaatgccctaagtcggcca
tcacttgtaaagaagagggccatttgcaacacgcagactttgttgtgccc
cgtacaagtgtatcgcctcaggtctaaaaggagtggtgcaacaattgttg
tcgtttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_75839539_75840554
seq2: B6Ng01-195J11.b_43_1064 (reverse)

seq1  GTGCATATC-ATCAGGCTTTAGTTTCTGCT-CAGGTAACTATACT-AAAA  47
      ||||||||| ||||||||| || ||||||| |||||||||||||| ||||
seq2  GTGCATATCAATCAGGCTTAAG-TTCTGCTCCAGGTAACTATACTAAAAA  49

seq1  AAGAG-AAAACATTTGTCCATCAATATTTTCAG-AAAGAAAAGTAACATT  95
      ||||| |||||||| |||||||||||||||||| ||||||||||||||||
seq2  AAGAGAAAAACATTAGTCCATCAATATTTTCAGAAAAGAAAAGTAACATT  99

seq1  TT-CCACACTGGTG-AAACATTTGGAAAAATACATATCTGACAACATACT  143
      || ||||||||||| ||||||||| |||||||||||||||||||||||||
seq2  TTCCCACACTGGTGAAAACATTTGAAAAAATACATATCTGACAACATACT  149

seq1  GGTATTAATACACATGGATAATGTTTGTAATTCAACAATAATAGAAAAAC  193
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GGTATTAATACACATGGATAATGTTTGTAATTC-ACAATAATAGAAAAAC  198

seq1  AAAGTATGAACAATTTTAAGTTGACAAAAATACTAAAAAGTTGAATTGTA  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTATGAACAATTTTAAGTTGACAAAAATACTAAAAAGTTGAATTGTA  248

seq1  GATATGAAAGGAAATGACTA-GGAACATGAAAATGCCCCCAACATCATTA  292
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GATATGAAAGGAAATGACTAGGGAACATGAAAATGCCCCCAACATCATTA  298

seq1  AAATTAACATAAATTAATTAACATTAGAAAAATGCAAAAATAAGGAGAAA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAACATAAATTAATTAACATTAGAAAAATGCAAAAATAAGGAGAAA  348

seq1  GAGATGACCCCTTTATCTCACCATCCTGAAGGTTCAGAAGTATCTTCTCT  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGACCCCTTTATCTCACCATCCTGAAGGTTCAGAAGTATCTTCTCT  398

seq1  GATGGCCCCTTTGGCCAAACCACAACATAGCACATCACATCATAATCAAA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCCCCTTTGGCCAAACCACAACATAGCACATCACATCATAATCAAA  448

seq1  CCACATGTGAAAATAAGCTGCCACACGATAAAAAACAAATCTATAAGCAT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATGTGAAAATAAGCTGCCACACGATAAAAAACAAATCTATAAGCAT  498

seq1  TCTGGAGCCAAGATTATGCTACATATCAATCCATTGGAAAACTAGGCTGG  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAGCCAAGATTATGCTACATATCAATCCATTGGAAAACTAGGCTGG  548

seq1  GTCTTAGGAGAATTGCATTACTCCATCCTGAGGTCATACCTAATGGTTGT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTAGGAGAATTGCATTACTCCATCCTGAGGTCATACCTAATGGTTGT  598

seq1  TTTTATCACCTCTTATACTACCACAATGTGAAAAATTCTCAAGTACTTAA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATCACCTCTTATACTACCACAATGTGAAAAATTCTCAAGTACTTAA  648

seq1  ATCTTTGGGGGATAGTTCACATACAAAACTCAAAAAAAAAAATAGAGAAA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTGGGGGATAGTTCACATACAAAACTCAAAAAAAAAAATAGAGAAA  698

seq1  GAAAGGAGAAATGGGTAACTGGACAGATATAATAAGGCAAGTAACCTTAC  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGAGAAATGGGTAACTGGACAGATATAATAAGGCAAGTAACCTTAC  748

seq1  TTGGTATTGGTAGAATCTGGATTATAGTTCATTATGCTATTCCCCCAATA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTATTGGTAGAATCTGGATTATAGTTCATTATGCTATTCCCCCAATA  798

seq1  TTCTGATGGTATGAAAGTTTTTAAAGAAAATACATTTATTGAATTAGAAG  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGATGGTATGAAAGTTTTTAAAGAAAATACATTTATTGAATTAGAAG  848

seq1  AATGTAAAAAGTTTTTTTTGGTTTCATAATAAAGAGATTTGTTATATAAC  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAAAAAGTTTTTTTTGGTTTCATAATAAAGAGATTTGTTATATAAC  898

seq1  TGTAACTGTAACTTATATAGAGATTGAATTTCTTAAATTTTCATATTGTT  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACTGTAACTTATATAGAGATTGAATTTCTTAAATTTTCATATTGTT  948

seq1  CAGGAATTCAATACACATATTTCTTAAAATATCTTAAAATGAATCACAAA  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAATTCAATACACATATTTCTTAAAATATCTTAAAATGAATCACAAA  998

seq1  CTACAACATATATTTATAGAATTC  1016
      ||||||||||||||||||||||||
seq2  CTACAACATATATTTATAGAATTC  1022