BAC Information

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BAC

Clone NameB6Ng01-196B10
ChromosomeX (Build37)
Map Location 110,319,001 - 110,426,205
singlet/doubletdoublet
Overlap geneEG664918, Dach2
Upstream gene4933403O08Rik, EG385407, Apool, Satl1, EG623341, 2010106E10Rik, Zfp711, Pof1b, LOC623412, EG623428, LOC100039112, Chm
Downstream geneLOC237016, EG664945, EG634881, LOC100039201
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-196B10.bB6Ng01-196B10.g
ACCGA018324GA018325
length741972
definitionB6Ng01-196B10.b B6Ng01-196B10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(110,425,539 - 110,426,205)(110,319,001 - 110,320,012)
sequence
gaattcttttgtgttaactctcctttccctgatctgtttttatccacagt
gcttactaccttctaacgtgcaatataatctgctttgatgcggtacactc
cacttgtttattttttaaatgtacacaaggaagaaaactgaacagaagag
aatacctcatgtctatttggtaaagaagaatggaaagaaaaaaggaaggg
agtgaagaaggggaggaaagaaggaaacgagggaagggtgggagtctgtt
ttaatctctatcgctgtgcaaaacactctgaccaaaagcaacttaagttt
acatatccaggttttagtctatcattgaggcaagtcaactcaagaactca
agcagaaaattaaattcaaaaccatagaggaacactgtctctctggttca
ctatctggctcataactttcttgtatggcccagacccacctgcctagaga
tagtacagcctacaaaggctataccctcctacatcaaccttcagtcaaaa
taactccccaaagacatggctacagctactcttatctaggcaacactagg
ctcccctcttatttgactctagactgtatcaagtagacagtgaaaggtaa
ctagaacagaaataatttctctatattttcatacattctatccatagtag
aatttcaagctctctgagacactcatacatcacataatggcatgtaaaca
gaaaaagatattattgttatttcagaaattcaatattatta
gaattctacagaagacagaaaggtattacagagttaaaaggatgcttaat
ggccctaaacttacaaatgaacaaatattcagttcattaacttgggccaa
gtgtctaaatgtagaccaatctctgtggtccaggacatgataggatgatt
gtctagcttaggtgatgtgatcactgaaggagtggaattaagtggatatt
gcacaataataaagccctcctgactgaaagttcacatgaatgttgcacag
ccaaagaaatgataatatatatgaacatatccaatccaatcataatgctg
cactagattcttgggagcatttactgaattaatactgaaaatatatttag
ttcctactggacaaattctatttttatattgaaagttcaaaaaaacaaaa
atttactcatttatataaacaatcgtttttaattttagtgtgaccactaa
catagttttcaaaaatttgcataatctcttaaacaaaccatgtacccttt
gtctattctctttcttctgtcactgtcctccagtcccagacaattactag
cttacattttaatctttttatgttttctcttttggaaattttgtattggc
ttcttttacattagcattgtgtatttaaggtttagccactattctattgt
gttgatgcacaacagtttgtttgtcttatttatcaattagtgaacttgaa
ttgtgtcatcttgggcttattggatatagactacaaaatttctgaaaaaa
aaactttttagagtcactttcattatattgaaataatattagcatcaaat
ggtggttattgtataaataatatttactgctggaaacctgacggatttct
actagtgatgtacattatcatgctacagattggtgtgaagtctgttctct
acctgtgtttagtcgacagctgttatggaagccaattctcttgattaggt
ttcaccactctgatgactagtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_110425539_110426205
seq2: B6Ng01-196B10.b_46_712 (reverse)

seq1  TCAGAGAGCTTTGAATTCTACTATGGATAGAATGTATGAAAATATAGAGA  50
      |||||||||||  |||||||||||||||||||||||||||||||||||||
seq2  TCAGAGAGCTTGAAATTCTACTATGGATAGAATGTATGAAAATATAGAGA  50

seq1  AATTATTTCTGTTCTAGTTACCTTTCACTGTCTACTTGATACAGTCTAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTTCTGTTCTAGTTACCTTTCACTGTCTACTTGATACAGTCTAGA  100

seq1  GTCAAATAAGAGGGGAGCCTAGTGTTGCCTAGATAAGAGTAGCTGTAGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAATAAGAGGGGAGCCTAGTGTTGCCTAGATAAGAGTAGCTGTAGCC  150

seq1  ATGTCTTTGGGGAGTTATTTTGACTGAAGGTTGATGTAGGAGGGTATAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTTTGGGGAGTTATTTTGACTGAAGGTTGATGTAGGAGGGTATAGC  200

seq1  CTTTGTAGGCTGTACTATCTCTAGGCAGGTGGGTCTGGGCCATACAAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTAGGCTGTACTATCTCTAGGCAGGTGGGTCTGGGCCATACAAGAA  250

seq1  AGTTATGAGCCAGATAGTGAACCAGAGAGACAGTGTTCCTCTATGGTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATGAGCCAGATAGTGAACCAGAGAGACAGTGTTCCTCTATGGTTTT  300

seq1  GAATTTAATTTTCTGCTTGAGTTCTTGAGTTGACTTGCCTCAATGATAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTAATTTTCTGCTTGAGTTCTTGAGTTGACTTGCCTCAATGATAGA  350

seq1  CTAAAACCTGGATATGTAAACTTAAGTTGCTTTTGGTCAGAGTGTTTTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAACCTGGATATGTAAACTTAAGTTGCTTTTGGTCAGAGTGTTTTGC  400

seq1  ACAGCGATAGAGATTAAAACAGACTCCCACCCTTCCCTCGTTTCCTTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCGATAGAGATTAAAACAGACTCCCACCCTTCCCTCGTTTCCTTCTT  450

seq1  TCCTCCCCTTCTTCACTCCCTTCCTTTTTTCTTTCCATTCTTCTTTACCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCCCTTCTTCACTCCCTTCCTTTTTTCTTTCCATTCTTCTTTACCA  500

seq1  AATAGACATGAGGTATTCTCTTCTGTTCAGTTTTCTTCCTTGTGTACATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGACATGAGGTATTCTCTTCTGTTCAGTTTTCTTCCTTGTGTACATT  550

seq1  TAAAAAATAAACAAGTGGAGTGTACCGCATCAAAGCAGATTATATTGCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAATAAACAAGTGGAGTGTACCGCATCAAAGCAGATTATATTGCAC  600

seq1  GTTAGAAGGTAGTAAGCACTGTGGATAAAAACAGATCAGGGAAAGGAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGAAGGTAGTAAGCACTGTGGATAAAAACAGATCAGGGAAAGGAGAG  650

seq1  TTAACACAAAAGAATTC  667
      |||||||||||||||||
seq2  TTAACACAAAAGAATTC  667

seq1: chrX_110319001_110320012
seq2: B6Ng01-196B10.g_66_1037

seq1  GAATTCTACAGAAGACAGAAAGGTATTACAGAGTTAAAAGGATGCTTAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACAGAAGACAGAAAGGTATTACAGAGTTAAAAGGATGCTTAAT  50

seq1  GGCCCTAAACTTACAAATGAACAAATATTCAGTTCATTAACTTGGGCCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCTAAACTTACAAATGAACAAATATTCAGTTCATTAACTTGGGCCAA  100

seq1  GTGTCTAAATGTAGACCAATCTCTGTGGTCCAGGACATGATAGGATGATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTAAATGTAGACCAATCTCTGTGGTCCAGGACATGATAGGATGATT  150

seq1  GTCTAGCTTAGGTGATGTGATCACTGAAGGAGTGGAATTAAGTGGATATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAGCTTAGGTGATGTGATCACTGAAGGAGTGGAATTAAGTGGATATT  200

seq1  GCACAATAATAAAGCCCTCCTGACTGAAAGTTCACATGAATGTTGCACAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAATAATAAAGCCCTCCTGACTGAAAGTTCACATGAATGTTGCACAG  250

seq1  CCAAAGAAATGATAATATATATGAACATATCCAATCCAATCATAATGCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGAAATGATAATATATATGAACATATCCAATCCAATCATAATGCTG  300

seq1  CACTAGATTCTTGGGAGCATTTACTGAATTAATACTGAAAATATATTTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAGATTCTTGGGAGCATTTACTGAATTAATACTGAAAATATATTTAG  350

seq1  TTCCTACTGGACAAATTCTATTTTTATATTGAAAGTTCAAAAAAACAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTACTGGACAAATTCTATTTTTATATTGAAAGTTCAAAAAAACAAAA  400

seq1  ATTTACTCATTTATATAAACAATCGTTTTTAATTTTAGTGTGACCACTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACTCATTTATATAAACAATCGTTTTTAATTTTAGTGTGACCACTAA  450

seq1  CATAGTTTTCAAAAATTTGCATAATCTCTTAAACAAACCATGTACCCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTTTTCAAAAATTTGCATAATCTCTTAAACAAACCATGTACCCTTT  500

seq1  GTCTATTCTCTTTCTTCTGTCACTGTCCTCCAGTCCCAGACAATTACTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATTCTCTTTCTTCTGTCACTGTCCTCCAGTCCCAGACAATTACTAG  550

seq1  CTTACATTTTAATCTTTTTATGTTTTCTCTTTTGGAAATTTTGTATTGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACATTTTAATCTTTTTATGTTTTCTCTTTTGGAAATTTTGTATTGGC  600

seq1  TTCTTTTACATTAGCATTGTGTATTTAAGGTTTAGCCACTATTCTATTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTACATTAGCATTGTGTATTTAAGGTTTAGCCACTATTCTATTGT  650

seq1  GTTGATGCACAACAGTTTGTTTGTC-TATTTATCAATTAGTGAACTTTGA  699
      ||||||||||||||||||||||||| ||||||||||||||||||| ||||
seq2  GTTGATGCACAACAGTTTGTTTGTCTTATTTATCAATTAGTGAAC-TTGA  699

seq1  ATTGTGTCATCTTTGGGCTATTAGGAATAATAGAACTACAAAAATTTCTG  749
      ||||||||||| |||||||  | |||   |||| ||||| ||||||||||
seq2  ATTGTGTCATC-TTGGGCTTATTGGA--TATAG-ACTAC-AAAATTTCTG  744

seq1  AAAAAAAAACTTTTTAGAAGGCCCACTTTCATTATTATTGGATATATATT  799
      ||||||||||||||||||     ||||||||||| ||||| |   |||||
seq2  AAAAAAAAACTTTTTAGA---GTCACTTTCATTA-TATTGAAATAATATT  790

seq1  AGCAATCAAAATGGGTTGGTTA-TGTATTAAATATATTTACTTGCTTGAA  848
      ||| ||| ||||||  |||||| ||||| ||  |||||||| ||| || |
seq2  AGC-ATC-AAATGG--TGGTTATTGTATAAATAATATTTAC-TGC-TGGA  834

seq1  AAACTGACAGAATTTTCTACTAAGTGATGTTACCATTTATCATTGCTACA  898
      || ||||| ||  |||||||| ||||||| |||   |||||| |||||| 
seq2  AACCTGACGGA--TTTCTACT-AGTGATG-TAC--ATTATCA-TGCTAC-  876

seq1  AGAATTGTGTGAGAGTTCTGGTTTCTCCTACCTGTTGTTTTAATTCTGAC  948
      ||| | |||||| || ||||  |||| ||||||| |||||  | || || 
seq2  AGATTGGTGTGA-AG-TCTG--TTCT-CTACCTG-TGTTT--AGTC-GA-  916

seq1  CAGGCTTGTGATGTGAAGCAATATCTCCTTGTATTATGGTTTCACACACT  998
      |||   ||| ||| ||||| |  ||| |||| |||| |||||||| ||||
seq2  CAG--CTGTTATG-GAAGCCAATTCT-CTTG-ATTA-GGTTTCAC-CACT  959

seq1  CCTAATGACTAGTT  1012
       || ||||||||||
seq2  -CTGATGACTAGTT  972