BAC Information

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BAC

Clone NameB6Ng01-200A22
ChromosomeX (Build37)
Map Location 163,570,582 - 163,571,655
singlet/doubletsinglet
Overlap genenone
Upstream geneGemin8, Gpm6b, Ofd1, Trappc2, Rab9, LOC100040795, A630018P17Rik, Egfl6, LOC100041912, LOC641660, LOC667791, EG667794, LOC100040850, LOC627268
Downstream geneTmsb4x, Tlr8, Tlr7, Prps2, EG627311, Frmpd4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-200A22.bB6Ng01-200A22.g
ACCGA021225GA021226
length1,1871,078
definitionB6Ng01-200A22.b B6Ng01-200A22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgataaaaagcaatctacaacaaacc
agtagtcaacatcaaagtaaatggtgagaagctggaagcaatcccactaa
aatcagggactagataaggctgtccactcttgccctacctattcaacatt
gtacttgaagtcctagccagagcaattacacaacaaaaggagatcaaggg
gatacaaattggaaaagaagaagtcaaaatatcactttttgcagatgata
tgatagtatatataagagaccctaaaaattccaccagagaactcctaagc
ctgataaacagcttcagtgaagtagctggatataaaattaactcaaacaa
gtcaatggcctttctgtacacaaaggataaacaggctgagaaagaaatta
gggaaacaacacccttctcaatagtcacaaataatataaaataccttggc
gtgactctaactaaggaaatgaaagatctgtatgataagaacttcaaacc
tctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccat
gctcatggattggcaggatcaacattgtaaaaatggctatcttgccaaaa
gcaatctagagattcactgcaatccccatcaaaatttcaactcaattctt
caacgaattagaaagggcaatcagcagattcatctggaataacaaaaaac
ttaggatagcaaaaactcttctcaaggataaaagaatctcttgtagaatc
accatgccggacctaaagctgtactacagagcaattgtgataaaaactgc
atggtattggtatagtgacagacaagtagaccagtgggaacagaattgaa
agacccagagatgaacccacacacctatggtcacttgatctttgacacct
atggtcacttgatctttgacaaggaagctaaaaccatccaatggaaaaaa
gacagcattttcaacaaatgatgctggcacacctggcggttatcatgtag
aaaaatggtgaattgatccatttctattcttctttgtactaaggtcaaat
ctagtgattagggacctccaataaactagagaacactgaaacttatagag
ggagaagtagcaaggctcgtagatttggttcagtaaattcctgaatgaat
gccatgccttggtgcttataagaaatcgtggagctat
gaattcatgacagccttactgcttccaacttacaagtggtaggccttcag
gcatgaaccacgatggttgacttcaatctgaatttcaaaggccatccctt
ctcattctctctgaacacatacacaagtgtgggctgtgtggccttatctt
acacccagggtcttctcttgtgctccctcaccaaattcttcagcgtcttt
attttgtccactcagaaactgcctcctgtatggattacaaaagtgtgctt
tcctatgaaggagcgtgatctttcgatgtgctttaaggcaaggggacaga
aagcagtttccatgtgaagctgtcagattctatcctgagcctcaggctga
cccatagatgggttgagtcatccacaggaagggtgatgaggtcagctagc
ctgaactgagaaacgtcagacccaactaagtcaagccatattcttggacc
cataaatagtttcaggatgaaacagatgatttactgatatcagaacgtcc
agactagttactttggttatctctttgggtatgtggtatctgttcttgag
acttcacgcattactcttaaacactttgtgcattgtccaagcagactggg
actgccccagactttgaccttgatggcttttagttcatgactaattccaa
gaacatagattatgtgattagtcaggcctcggagaagaggaagctgctga
ctagaagcaatttgcaagaataaggggaaatacagatacagaggcctgag
aaggcagagtgtggaattttggaaattttgcttttgtagaactcaccatt
ccatgatgataacacatatgttaggtggggaaataaagacataaaaaact
gagccacccttgctggcatatgccctataatcctagcacatgggagatgt
aggcaggagggttaggaattcatttcttgtctttaaaattatagagagaa
cttaacaacaaacttcggatattagaaattggaatattttcccacttcag
gactttaaccctttagactattttagtgttaaaaagcatagtgctgatga
tgaagtatgatgttgcttatttgaacgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_163570582_163571655
seq2: B6Ng01-200A22.g_66_1143 (reverse)

seq1  CCGTTCCAAATAAAGCAACATCATACTTCATCACCAACACTTATGCTTTT  50
      ||||| ||||| ||||||||||||||||||||| || ||| |||||||||
seq2  CCGTT-CAAAT-AAGCAACATCATACTTCATCATCAGCAC-TATGCTTTT  47

seq1  TTAAACACTAAAATAGTCTAA--GGGTAAAGTCTTGAAGTTGG-AAATAT  97
      |  ||||||||||||||||||  || ||||||| |||||| || ||||||
seq2  T--AACACTAAAATAGTCTAAAGGGTTAAAGTCCTGAAGTGGGAAAATAT  95

seq1  T-CAATTTCT-ATATC--GAGTTTGTTTGTTAGTTCTCTCTATATTTTTA  143
      | |||||||| |||||   ||||||||  | ||||||||||||| |||| 
seq2  TCCAATTTCTAATATCCGAAGTTTGTTGTTAAGTTCTCTCTATAATTTT-  144

seq1  AAAGACAAG-AATGAATTCCTAACCCTCCTGCCTACATCTTCCATGTGCT  192
      ||||||||| |||||||||||||||||||||||||||||| |||||||||
seq2  AAAGACAAGAAATGAATTCCTAACCCTCCTGCCTACATCTCCCATGTGCT  194

seq1  AGGATTATA-GGCATATGCCAGCAAGGGTGGCTCAG-TTTTTATGTCTTT  240
      ||||||||| |||||||||||||||||||||||||| |||||||||||||
seq2  AGGATTATAGGGCATATGCCAGCAAGGGTGGCTCAGTTTTTTATGTCTTT  244

seq1  ATTTCCCCACCTAACATATGTGTTATCATCATGGAATGGTGAGTTCTACA  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCCCACCTAACATATGTGTTATCATCATGGAATGGTGAGTTCTACA  294

seq1  AAAGCAAAATTTCCAAAATTCCACACTCTGCCTTCTCAGGCCTCTGTATC  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAAAATTTCCAAAATTCCACACTCTGCCTTCTCAGGCCTCTGTATC  344

seq1  TGTATTTCCCCTTATTCTTGCAAATTGCTTCTAGTCAGCAGCTTCCTCTT  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTTCCCCTTATTCTTGCAAATTGCTTCTAGTCAGCAGCTTCCTCTT  394

seq1  CTCCGAGGCCTGACTAATCACATAATCTATGTTCTTGGAATTAGTCATGA  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCGAGGCCTGACTAATCACATAATCTATGTTCTTGGAATTAGTCATGA  444

seq1  ACTAAAAGCCATCAAGGTCAAAGTCTGGGGCAGTCCCAGTCTGCTTGGAC  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAAGCCATCAAGGTCAAAGTCTGGGGCAGTCCCAGTCTGCTTGGAC  494

seq1  AATGCACAAAGTGTTTAAGAGTAATGCGTGAAGTCTCAAGAACAGATACC  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCACAAAGTGTTTAAGAGTAATGCGTGAAGTCTCAAGAACAGATACC  544

seq1  ACATACCCAAAGAGATAACCAAAGTAACTAGTCTGGACGTTCTGATATCA  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACCCAAAGAGATAACCAAAGTAACTAGTCTGGACGTTCTGATATCA  594

seq1  GTAAATCATCTGTTTCATCCTGAAACTATTTATGGGTCCAAGAATATGGC  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATCATCTGTTTCATCCTGAAACTATTTATGGGTCCAAGAATATGGC  644

seq1  TTGACTTAGTTGGGTCTGACGTTTCTCAGTTCAGGCTAGCTGACCTCATC  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTTAGTTGGGTCTGACGTTTCTCAGTTCAGGCTAGCTGACCTCATC  694

seq1  ACCCTTCCTGTGGATGACTCAACCCATCTATGGGTCAGCCTGAGGCTCAG  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTCCTGTGGATGACTCAACCCATCTATGGGTCAGCCTGAGGCTCAG  744

seq1  GATAGAATCTGACAGCTTCACATGGAAACTGCTTTCTGTCCCCTTGCCTT  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGAATCTGACAGCTTCACATGGAAACTGCTTTCTGTCCCCTTGCCTT  794

seq1  AAAGCACATCGAAAGATCACGCTCCTTCATAGGAAAGCACACTTTTGTAA  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCACATCGAAAGATCACGCTCCTTCATAGGAAAGCACACTTTTGTAA  844

seq1  TCCATACAGGAGGCAGTTTCTGAGTGGACAAAATAAAGACGCTGAAGAAT  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATACAGGAGGCAGTTTCTGAGTGGACAAAATAAAGACGCTGAAGAAT  894

seq1  TTGGTGAGGGAGCACAAGAGAAGACCCTGGGTGTAAGATAAGGCCACACA  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGAGGGAGCACAAGAGAAGACCCTGGGTGTAAGATAAGGCCACACA  944

seq1  GCCCACACTTGTGTATGTGTTCAGAGAGAATGAGAAGGGATGGCCTTTGA  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCACACTTGTGTATGTGTTCAGAGAGAATGAGAAGGGATGGCCTTTGA  994

seq1  AATTCAGATTGAAGTCAACCATCGTGGTTCATGCCTGAAGGCCTACCACT  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAGATTGAAGTCAACCATCGTGGTTCATGCCTGAAGGCCTACCACT  1044

seq1  TGTAAGTTGGAAGCAGTAAGGCTGTCATGAATTC  1074
      ||||||||||||||||||||||||||||||||||
seq2  TGTAAGTTGGAAGCAGTAAGGCTGTCATGAATTC  1078