BAC Information

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BAC

Clone NameB6Ng01-205A07
ChromosomeX (Build37)
Map Location 109,671,253 - 109,671,812
singlet/doubletsinglet
Overlap gene2010106E10Rik
Upstream geneEG664791, D030011N01Rik, LOC100038989, Tex16, LOC622570, 4933403O08Rik, EG385407, Apool, Satl1, EG623341
Downstream geneZfp711, Pof1b, LOC623412, EG623428, LOC100039112, Chm, EG664918, Dach2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-205A07.g
ACCGA024810
length611
definitionB6Ng01-205A07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccattacctgctgggaaagtattgcgcttcttttggatgaacaga
tttctgcatctggtgaattgatggaattgaataggagaaatgaaagtttt
gcattatggtctcaggaggggccaacaaagaaaaaaaaaactgaagacat
aaagaagacaattatcataattataagaaaaacaaagtatgtaaagaaag
gaaatctctttccctgcgtttccttggctgtaaccagactggtgtgtgtt
tatttccacacccccttttttttccctgggtatataaaaagagtggtatc
atgtttgcacgacccatggtggaaaagatttctcagtcttcatagttgga
gtatttcttttcttttggaggatatgctgctcgggggaccccggatgtgg
aaaaatcctgcaaggaagttgaaaacgtcaaagtaattacatggcatctg
ataaaatgtttaagcttgcttagatagggtattgaattagaaaattaagc
atatgttatgttatttaattaaaatgtttaattatcataataagtccata
attatttaaatcaataaagtattttctttcagtaaatgaatttagtttgc
ttttaaatagc
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_109671253_109671812
seq2: B6Ng01-205A07.g_121_679 (reverse)

seq1  GCTATTTAAAAGCAACTAAAATTCATTTACTGAAAG-AAATACTTTATTG  49
      |||||||||||||||   |||||||||||||||||| |||||||||||||
seq2  GCTATTTAAAAGCAAACTAAATTCATTTACTGAAAGAAAATACTTTATTG  50

seq1  ATTTAAATAATTATGGACTTATTATGATAATTAAACATTTTAATTAAATA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAATAATTATGGACTTATTATGATAATTAAACATTTTAATTAAATA  100

seq1  ACATAACATATGCTTAATTTTCTAATTCAATACCCTATCTAAGCAAGCTT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAACATATGCTTAATTTTCTAATTCAATACCCTATCTAAGCAAGCTT  150

seq1  AAACATTTTATCAAATGCCATGTAATTACTTTGACGTTTTCAACTTCCTT  199
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AAACATTTTATCAGATGCCATGTAATTACTTTGACGTTTTCAACTTCCTT  200

seq1  GCAGGATTTTTCCACATCCGGGGTCCCACGAGCAGCATATCCTCCAAAAG  249
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GCAGGATTTTTCCACATCCGGGGTCCCCCGAGCAGCATATCCTCCAAAAG  250

seq1  AAAAGAAATACTCGGTTTATGAAGAGTCAGAAATCACTTACAAAATTGGT  299
      |||||||||||||    |||||||| | |||||||  || ||  || |||
seq2  AAAAGAAATACTCCAACTATGAAGACTGAGAAATCTTTTCCACCATGGGT  300

seq1  CGTGCAAACATGATACCCAACTATTAATATACCCATGGAAAAAAATAACT  349
      |||||||||||||||||   || || ||||||||| |||||||||     
seq2  CGTGCAAACATGATACCACTCTTTTTATATACCCAGGGAAAAAAAAGGGG  350

seq1  GTGTGTAAATCTACATACACCAATCTTGTTATATACCAAGGAAACACTAC  399
      ||||| ||||  ||| |||||| ||| |||| |  |||||||||| |   
seq2  GTGTGGAAATAAACACACACCAGTCTGGTTACA-GCCAAGGAAACGCAGG  399

seq1  AAATATGATTTCCATGCTCTACATACTTTGTTTTTCTTATAATTATGATA  449
       ||   ||||||| | || |||||||||||||||||||||||||||||||
seq2  GAAAGAGATTTCCTTTCTTTACATACTTTGTTTTTCTTATAATTATGATA  449

seq1  ATTGTTTTCTTTATGTCTTGAGTTTTTTTTTTCTTTGTTGGCCCCTCCTG  499
      ||||| ||||||||||||| ||||||||||||||||||||||||||||||
seq2  ATTGTCTTCTTTATGTCTTCAGTTTTTTTTTTCTTTGTTGGCCCCTCCTG  499

seq1  ATGACCATAATGCAAAACTTTCATTTCTTCTATTCAATTCCATTAATTCA  549
      | |||||||||||||||||||||||||| |||||||||||||| ||||||
seq2  A-GACCATAATGCAAAACTTTCATTTCTCCTATTCAATTCCATCAATTCA  548

seq1  CCAGATGCAGA  560
      |||||||||||
seq2  CCAGATGCAGA  559