BAC Information

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BAC

Clone NameB6Ng01-205B17
ChromosomeX (Build37)
Map Location 18,460,276 - 18,461,451
singlet/doubletsinglet
Overlap geneEG628855
Upstream geneEG436196, EG331391, Dusp21, LOC100043951, Utx, LOC100043952, 4930578C19Rik, LOC100043098
Downstream geneLOC385333, EG628871, LOC100043953, BC049702, LOC675558, LOC668995
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-205B17.bB6Ng01-205B17.g
ACCGA024876GA024877
length1,179200
definitionB6Ng01-205B17.b B6Ng01-205B17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttcctgtgctaaaaaattgagatatgtgagtttagtctacttat
aactgaacagaatatggttgcatgggtggtaggagaagatacaagactcc
tgggtcggtaattaatttcaggaaggatcagagagtaggttgcaagcaca
tcagagaatgtttcctggggaggagctctcataaggtgctggggagatgg
ccaggtagcatctgcacatttaggaaaatatagatcttttaaaagtgaaa
aacaaacatttctagccttttctcaggcgcaaaacactgcattacacagc
tattcttgaaaatgtaacctggaacagaaaaacagtcttattttgcttac
aagatacacagaaacagagagacctgtggaagtgctcaatgtctgaaata
tgattcagacaggtaaacgggatttaactgaactctactgggaaatttgc
tgcactagtgctatagtgaaatggctgccatgaattggtaagaaaaccca
ggatgaaaacattcaattgtgaattgtttcattcaacattaatacctaca
tgagagagagagagagagagagagagagagagagagagatcctctttagc
ctgctatttcctcccttcccctcatatttagattatctgctattgttttt
ttttaaagtccccaaagcctagtgactaaaaacaatatattaaggatcaa
ttattctgtgggttgaatgggcacagccaggtggtccttcgtttctccca
ggtggttagactctgatggcagctggagtcattaggagactcaactgagt
gagacatccaaaatggattctttagccacatctgtctcatctgccaagat
ctgagaaacagctaaatgtttttcaggcattttccctcttcatctagctt
tctttcatgtggcttccacaaagggacagtagttttaggggtagtcccga
ctttttacaggacaactgggcttcctttcagagcaagtagtcaagagagt
caaggtataactgcaggccttttctttacatcagacaagggacttcacct
aggggaacacaagagatttagaacatgtgaagtagagcaccctgtgacta
tcacatgaggaggtagatctagcctaagtcaatgtgtcattgcacaggct
aggactctatttaccatatactacctaaa

ctttctgctcagggaaagtcaaacttatgctatttggactatcttagggc
ttctatttctgtgaagagacaccatgactaatgcaacacttataaaggac
agcatttaattgggactggtttataggtacagagattcagttcatcatta
tcatggtgaaaaacatggcagcatgcaggagggtatggtgttgaaggagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_18460276_18461451
seq2: B6Ng01-205B17.b_70_1228 (reverse)

seq1  TTTAGGTAATTATATTTGTTTAAAAATAGAGTCCTAGCCTGGTGGACAAA  50
      ||||||||    ||| || |   ||||||||||||||||| |||  ||| 
seq2  TTTAGGTA---GTATATGGT---AAATAGAGTCCTAGCCT-GTG--CAAT  41

seq1  TGCACATTTGACTTTTAGCTAGATTCTAACTTTCCTTCATGTGATAGTCA  100
        |||| ||||| ||  |||||| |||| ||   | ||||||||||||||
seq2  GACACA-TTGAC-TTAGGCTAGA-TCTACCT---CCTCATGTGATAGTCA  85

seq1  CCAGGGGTGCTCCTAACCTCACATGTTCTAAATCTCCTGGTGTTTCCCCT  150
      |   ||||||||   || ||||||||||||||||| || |||||  ||| 
seq2  C--AGGGTGCTC--TACTTCACATGTTCTAAATCT-CTTGTGTT--CCCC  128

seq1  TGGGTGAAGTCCCTTGTTCTGGTGGTAAAGAAAAGCCTTGCAGTTTATAC  200
      | |||||||||||||| |||| | ||||||||||| | ||||| ||||||
seq2  TAGGTGAAGTCCCTTG-TCTGAT-GTAAAGAAAAGGCCTGCAG-TTATAC  175

seq1  C-TGACTCTCTTTGACTACTTGCTCTG-AAGGAAG-CCAGTTGTCCTGTA  247
      | |||||||| |||||||||||||||| ||||||| ||||||||||||||
seq2  CTTGACTCTC-TTGACTACTTGCTCTGAAAGGAAGCCCAGTTGTCCTGTA  224

seq1  AAAAGTC-GGACTACCCCT-AAACTACTGT-CCTTTGTGGAAGCCACATG  294
      ||||||| ||||||||||| |||||||||| |||||||||||||||||||
seq2  AAAAGTCGGGACTACCCCTAAAACTACTGTCCCTTTGTGGAAGCCACATG  274

seq1  AA--GAAGCTAGATGAAGAGGG-AAATGCCTGAAAAACATTTAGCTGTTT  341
      ||   ||||||||||||||||| |||||||||||||||||||||||||||
seq2  AAAGAAAGCTAGATGAAGAGGGAAAATGCCTGAAAAACATTTAGCTGTTT  324

seq1  CTCAGATCTTGGCAGATGAGACAGATGTGGCTAAAGAATCCATTTTGGAT  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGATCTTGGCAGATGAGACAGATGTGGCTAAAGAATCCATTTTGGAT  374

seq1  GTCTCACTCAGTTGAGTCTCCTAATGACTCCAGCTGCCATCAGAGTCTAA  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCACTCAGTTGAGTCTCCTAATGACTCCAGCTGCCATCAGAGTCTAA  424

seq1  CCACCTGGGAGAAACGAAGGACCACCTGGCTGTGCCCATTCAACCCACAG  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTGGGAGAAACGAAGGACCACCTGGCTGTGCCCATTCAACCCACAG  474

seq1  AATAATTGATCCTTAATATATTGTTTTTAGTCACTAGGCTTTGGGGACTT  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATTGATCCTTAATATATTGTTTTTAGTCACTAGGCTTTGGGGACTT  524

seq1  TAAAAAAAAACAATAGCAGATAATCTAAATATGAGGGGAAGGGAGGAAAT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAAAACAATAGCAGATAATCTAAATATGAGGGGAAGGGAGGAAAT  574

seq1  AGCAGGCTAAAGAGGATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGCTAAAGAGGATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  624

seq1  TCTCATGTAGGTATTAATGTTGAATGAAACAATTCACAATTGAATGTTTT  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATGTAGGTATTAATGTTGAATGAAACAATTCACAATTGAATGTTTT  674

seq1  CATCCTGGGTTTTCTTACCAATTCATGGCAGCCATTTCACTATAGCACTA  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTGGGTTTTCTTACCAATTCATGGCAGCCATTTCACTATAGCACTA  724

seq1  GTGCAGCAAATTTCCCAGTAGAGTTCAGTTAAATCCCGTTTACCTGTCTG  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAGCAAATTTCCCAGTAGAGTTCAGTTAAATCCCGTTTACCTGTCTG  774

seq1  AATCATATTTCAGACATTGAGCACTTCCACAGGTCTCTCTGTTTCTGTGT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATATTTCAGACATTGAGCACTTCCACAGGTCTCTCTGTTTCTGTGT  824

seq1  ATCTTGTAAGCAAAATAAGACTGTTTTTCTGTTCCAGGTTACATTTTCAA  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGTAAGCAAAATAAGACTGTTTTTCTGTTCCAGGTTACATTTTCAA  874

seq1  GAATAGCTGTGTAATGCAGTGTTTTGCGCCTGAGAAAAGGCTAGAAATGT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGCTGTGTAATGCAGTGTTTTGCGCCTGAGAAAAGGCTAGAAATGT  924

seq1  TTGTTTTTCACTTTTAAAAGATCTATATTTTCCTAAATGTGCAGATGCTA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTTCACTTTTAAAAGATCTATATTTTCCTAAATGTGCAGATGCTA  974

seq1  CCTGGCCATCTCCCCAGCACCTTATGAGAGCTCCTCCCCAGGAAACATTC  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCCATCTCCCCAGCACCTTATGAGAGCTCCTCCCCAGGAAACATTC  1024

seq1  TCTGATGTGCTTGCAACCTACTCTCTGATCCTTCCTGAAATTAATTACCG  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATGTGCTTGCAACCTACTCTCTGATCCTTCCTGAAATTAATTACCG  1074

seq1  ACCCAGGAGTCTTGTATCTTCTCCTACCACCCATGCAACCATATTCTGTT  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGGAGTCTTGTATCTTCTCCTACCACCCATGCAACCATATTCTGTT  1124

seq1  CAGTTATAAGTAGACTAAACTCACATATCTCAATT  1176
      |||||||||||||||||||||||||||||||||||
seq2  CAGTTATAAGTAGACTAAACTCACATATCTCAATT  1159


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