BAC Information

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BAC

Clone NameB6Ng01-205J13
ChromosomeX (Build37)
Map Location 27,867,535 - 27,868,693
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039194, LOC100039208, EG664877, LOC664881, LOC100039240, LOC100039248, LOC100039073, EG664890, LOC664898, LOC22526, EG664906, LOC664917
Downstream geneLOC100039324, LOC100039334, LOC100039096, EG664923, LOC100039364, LOC100039377, LOC100039386, LOC100039127, EG664944, LOC100039423, LOC100039145, LOC664951, LOC100042071, LOC664958, LOC664964
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-205J13.bB6Ng01-205J13.g
ACCGA025236GA025237
length1,1771,196
definitionB6Ng01-205J13.b B6Ng01-205J13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactatagttacttgtggcaggtaggatctcaataatacctatgt
acaccatctttttttgctggtaaaagcaggtattattgatatcagtatag
cttccagttgcaagtaggatcaaacacatctctgaggtggaactcagaac
actccacatgaagtaggtagcagcactgtccatgaacttcaaggtagatt
cttctggcagtagggctcacagatatcaccaagctcttgagagcaaaaac
tgactagggatatcaacatggttaccacaggcagcaggattaagtgacat
caagatattttccaatgcaactgagatcaatgatataatcaatagggtcc
aaactgacagcaagaatccctaatcttcttgtggctaatggaagcaatca
tctgagatgaaccatgttgtttgttgccaggaggtatcattggcatgtac
acagtttcagaggacatataagaccatagacagtaatgtccactgtagtg
gcaggatagacctttgacatcaaattggttagagctggcagtacacatca
tatacctaacatggtttcagttggcagaagtgtggattgatgatatcagt
atatattttggtggcatttggagtagcatgtattaatgttccaagtggca
gcagagaacatggacatcctggatgatcctggatgatcccggtatcaagg
attgtggacatacaacaatggtattttttcccacattatatcaatgaaat
caatataacatatcttagaacactttacaacatgacctcaagctgcagtt
ttgaccttaaagttcagaatagactctggtggccaaaggggcttccttga
tttccatcagaaagcaacacagaccataacatttcaatatagatgctagt
gccatcattggttataaaccctcaaaatactttctaactgcactttgaat
tattgatataatatggtactcattttgtacaaggggtcactgaaatcaag
gttgcctgttggtagcaccagattctggccagaaaaaaaacatggtaact
tgtttccaggtgtaatcttggacgtcagcatagattcagaaccctgggta
tagatttaacatagcggtccttctctccattgccaggattgaatccattg
atactgttatctgttcttcttgttgca
gaattctcacctgaggaataccgaatggaagagaagcacctgaaaaaatg
ttcaaaatccttaaccatcagggaaatgcaaatcaaaacaacactgagat
tccacttcactccagtcagaatggctaagatcaaaaaatcaggtggcagc
agatgctggcgaggatgtggagaaaggggaacactcctccatagttggtg
ggattgcaagcttgtacaacctctctggaaatcagtctggcggttcctcc
gaaaattggacatattactaccggaggatcccacaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaagaacacatcctccactat
gttcatagcagccttatttataatagccagaaagtggaaataacacagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
aaatactactcagctatttacaaaaatgaatttatgaaattcctaggcaa
atggatggacctggagggtatcatcctgagtgaagtaagccaatcacaaa
ggaactcgcacaatatgtactcactgataagtggatattagcccagaaac
ttaggatacccaatatataagatacaacttgccaaacgcatgaatttcaa
gaagaacgaagaccaaagtgtggacactctaccctttcttaaaaatggga
acaaaacacccatagaaggagttacacagacaaaatttggagctgtgacg
aaaggatggaccatctagtgatttccatatgcagggatccatcccataat
cagctttccaaatgctgacaccattgcatacactagtaagattttgctga
aggacccagatatagctctctctttgtgagagtatgccggggcctagcaa
acacagaagtggatgatcacagtcagctattggatgggtcacacggcccc
ttattgagaagctagagaaattacccaagggagaaaaagggaactgcacc
cttattatgtgggaacaacaatatgaactatccagtacccggggagcctc
ttgcctttagctgcatatgtttccaaaaaatggccctagccaggtcattc
actgcaagagaaggtcccatatgaccttgcaactttaattgcccaataca
gggtaaccccaggttacaaaaatggccattgggggtgataatgacg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_27867535_27868693
seq2: B6Ng01-205J13.b_49_1225

seq1  GAATTCACTATAGTTACTTGTGGCAGGTAGGATCTCAATAATACCTATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTATAGTTACTTGTGGCAGGTAGGATCTCAATAATACCTATGT  50

seq1  ACACCATCTTTTTTTGCTGGTAAAAGCAGGTATTATTGATATCAGTATAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCATCTTTTTTTGCTGGTAAAAGCAGGTATTATTGATATCAGTATAG  100

seq1  CTTCCAGTTGCAAGTAGGATCAAACACATCTCTGAGGTGGAACTCAGAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAGTTGCAAGTAGGATCAAACACATCTCTGAGGTGGAACTCAGAAC  150

seq1  ACTCCACATGAAGTAGGTAGCAGCACTGTCCATGAACTTCAAGATAGATT  200
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  ACTCCACATGAAGTAGGTAGCAGCACTGTCCATGAACTTCAAGGTAGATT  200

seq1  CTTCTGGCAGTAGGGCTCACAGATATCACCAAGCTCTTGAGAGCAAAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGGCAGTAGGGCTCACAGATATCACCAAGCTCTTGAGAGCAAAAAC  250

seq1  TGACTAGGGATATCAACATGGTTACCACAGGCAGCAGGATTAAGTGACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTAGGGATATCAACATGGTTACCACAGGCAGCAGGATTAAGTGACAT  300

seq1  CAAGATATTTTCCAATGCAACTGAGATCAATGATATAATCAATAGGGTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATATTTTCCAATGCAACTGAGATCAATGATATAATCAATAGGGTCC  350

seq1  AAACTGACAGCAAGAATCCCTAATCTTCTTGTGGCTAATGGAAGCAATCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGACAGCAAGAATCCCTAATCTTCTTGTGGCTAATGGAAGCAATCA  400

seq1  TCTGAGATGAACCATGTTGTTTGTTGCCAGGAGGTATCATTGGCATGTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGATGAACCATGTTGTTTGTTGCCAGGAGGTATCATTGGCATGTAC  450

seq1  ACAGTTTCAGAGGACATATAAGACCATAGACAGTAATGTCCACTGTAGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTTCAGAGGACATATAAGACCATAGACAGTAATGTCCACTGTAGTG  500

seq1  GCAGGATAGACCTTTGACATCAAATTGGTTAGAGCTGGCAGTACACATCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGATAGACCTTTGACATCAAATTGGTTAGAGCTGGCAGTACACATCA  550

seq1  TATACCTAACATGGTTTCAGTTGGCAGAAGTGTGGATTGATGATATCAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACCTAACATGGTTTCAGTTGGCAGAAGTGTGGATTGATGATATCAGT  600

seq1  ATATATTTTGGTGGCATTTGGAGTAGCATGTATTAATGTTCCAAGTGGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTTTGGTGGCATTTGGAGTAGCATGTATTAATGTTCCAAGTGGCA  650

seq1  GCAGAGAACATGGACATCCTGGATGATCCTGGATGATCCCGGTATCAAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGAACATGGACATCCTGGATGATCCTGGATGATCCCGGTATCAAGG  700

seq1  ATTGTGGACATACAACAATGGTATTTTTTCCCACATTATATCAATGAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGGACATACAACAATGGTATTTTTTCCCACATTATATCAATGAAAT  750

seq1  CAATATAACATATCTTAGAACACTTTACAACATGACCTCAAGCTGCAGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATAACATATCTTAGAACACTTTACAACATGACCTCAAGCTGCAGTT  800

seq1  TTGACCTTAAAGTTCAGAATAGACTCTGGTGGCCAAAGGG--CTCCTTGA  848
      ||||||||||||||||||||||||||||||||||||||||   |||||||
seq2  TTGACCTTAAAGTTCAGAATAGACTCTGGTGGCCAAAGGGGCTTCCTTGA  850

seq1  -TTCCATCAG-AAGCAACACAGACCAT-ACATTTCAATATAGATGCTAGT  895
       ||||||||| |||||||||||||||| ||||||||||||||||||||||
seq2  TTTCCATCAGAAAGCAACACAGACCATAACATTTCAATATAGATGCTAGT  900

seq1  GCCATCATTGGTTATAAA-CCTCAAAATACTTTCTAACTGCACTTTGAAT  944
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GCCATCATTGGTTATAAACCCTCAAAATACTTTCTAACTGCACTTTGAAT  950

seq1  TATTGATATTAATATGGTACTCA-TTTGTAACAGGGGTCACTGAAATCAA  993
      |||||||| |||||||||||||| ||||||  ||||||||||||||||||
seq2  TATTGATA-TAATATGGTACTCATTTTGTACAAGGGGTCACTGAAATCAA  999

seq1  GGTTGCCTG-TGGTAGCA-CAGA-TCTTGCC-GGAAAAAAACATGGTTAC  1039
      ||||||||| |||||||| |||| ||| ||| | ||||||||||||| ||
seq2  GGTTGCCTGTTGGTAGCACCAGATTCTGGCCAGAAAAAAAACATGGTAAC  1049

seq1  -TGTTTCCAGGTGT-ATCTTTGACATCAGCATAGATTCAGAA-CCTGGGT  1086
       ||||||||||||| ||||| ||| ||||||||||||||||| |||||||
seq2  TTGTTTCCAGGTGTAATCTTGGACGTCAGCATAGATTCAGAACCCTGGGT  1099

seq1  ATAGTATTAACATAAGCGTC---TTCTCCATTGCCAGGATGGA--TCAAT  1131
      ||||  ||||||||   |||    |||||||||||||||| ||   || |
seq2  ATAGATTTAACATAGCGGTCCTTCTCTCCATTGCCAGGATTGAATCCATT  1149

seq1  GATACTGTGATCAGTTCTTCTGGTTGCA  1159
      |||||||| ||| |||||||| ||||||
seq2  GATACTGTTATCTGTTCTTCTTGTTGCA  1177