BAC Information

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BAC

Clone NameB6Ng01-206O04
ChromosomeX (Build37)
Map Location 164,374,616 - 164,523,712
singlet/doubletdoublet
Overlap geneFrmpd4
Upstream geneLOC667791, EG667794, LOC100040850, LOC627268, Tmsb4x, Tlr8, Tlr7, Prps2, EG627311
Downstream geneEG667822, EG637566, Msl31, Arhgap6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-206O04.bB6Ng01-206O04.g
ACCGA026184GA026185
length1,0431,097
definitionB6Ng01-206O04.b B6Ng01-206O04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(164,523,121 - 164,523,712)(164,374,616 - 164,375,550)
sequence
ggaattctagaatcgtgagaaataaatttatgttctttttaaattgcctg
ttgcaaggcattttgttataaatggaccatgacaactaccctgaatattt
taatgtaatactttattaattctttgagaattttatatatttggatcata
ttcaccttctactcttccccttaattcctgctagctcctgtcttaccttc
ctactgcctaccaattttgtatcctccttttgcatataaaaccataaagt
tttaagagttgttatctggcattcaggtcattgtcagtctggtctacatg
acaggccaagaatagttttgttatatatttgtacataataagaaatatta
taatttggggatatgtttgaggtgctagttgagtagtacttacatatttt
gttgtttgtagtcagccaagatgtctacttgacaatttattaagagtgtc
ttctatattctaagacttatgctagaaatgatgaatgttgaagataaaac
aaaaatactttgtgtggtttatgggctaagaaaaggtataggtaagggct
agatgggatctagaacagtggttctcaaccttcctaatgctgggacccct
taatacagtttatcatgttatggtgaccttcaaccataaaagtattttgt
tgctgctttataattgtaattttgttacagttatgaattgtaatgtaaat
atctgatatggagattgtcttagacaacccccaaacaaagagtatttcaa
atcacaggttgagaaccactgatttagaattacctcagagacatgtctct
agctatgcctgtgaaatagttgctagattgagttaactgagataagaaga
cccatcccatgggctaggaccatagactaaacaaaaatgaaaacagacag
acaaactgagtgtcagcattcatccttttctgattcctgagtgtggcaca
atgatagactggatcattaaatgataaatcagagtaagccctttctttgt
taagtgcttcttgtcagttatttgtagacatgagaaaagtact

gaattcttttcagtggcttcctgccaaagctgttacttttgggggctggg
gaggggctggggcagaaaggttctcacataagccttccatgtctctccct
ctcaactgtgcatctgcagttgtcaatatcccagcaagagtagcttcctt
tcaggagcagagatcatgaatcttcactcagtttctggtgacagcacaga
tgacgaacatggtcccctgctgcagcagggtcacggaccctgacaaggcc
ctcagaggctgcctgggttatagacatcaacatagcagctcaggccaccc
acatcattatggcctctggaggcagcacggtccatggacattggcctttg
atggtaacccagaccacagatatcaacacagaaccccagtcctcccagct
gcaggaaggcctttgactccaactcagcccttgataacagcaaggatcca
gacatctccatagcctcaggtgacagcataggccactcacttcaatttgg
tccccagtggcagcagagcctataaacatgagtatagatagcttcggggc
ttcagggtacagcacagaccaaggacatcagaatgtcctatgttgagaac
actggccatggtcatcaacacagaccccagctgcagcagaaccacagacc
cagacatgacccttgctttgctgtttttttttaatcttaatacaaataat
atgagtatcattagaaatctgctctttgcatgtctatgattgttacccaa
ttattattacatggaaataacatattactttttccttcagctatattctt
acaatggaactatgcgtttttgtctatttcaccattgatggctttttaag
ttgtttgatatctaggactatgacaaaacttttattgatcttttatgtct
ctaaatgatctgatttttcttctctcctttaatccctatatcttgcagaa
actaccaaattagtatgtttatggcaagatgccattcatagaattcatat
atgtccaataactttttactggcttttaaataaaactagattctgattca
atagtcactgttccagtgctaggagatagatcagtcactaaatgctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_164523121_164523712
seq2: B6Ng01-206O04.b_43_634 (reverse)

seq1  CAGCATTAGGAAGGTTGAGAACCACTGTTCTAGATCCCATCTAGCCCTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATTAGGAAGGTTGAGAACCACTGTTCTAGATCCCATCTAGCCCTTA  50

seq1  CCTATACCTTTTCTTAGCCCATAAACCACACAAAGTATTTTTGTTTTATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATACCTTTTCTTAGCCCATAAACCACACAAAGTATTTTTGTTTTATC  100

seq1  TTCAACATTCATCATTTCTAGCATAAGTCTTAGAATATAGAAGACACTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACATTCATCATTTCTAGCATAAGTCTTAGAATATAGAAGACACTCT  150

seq1  TAATAAATTGTCAAGTAGACATCTTGGCTGACTACAAACAACAAAATATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAATTGTCAAGTAGACATCTTGGCTGACTACAAACAACAAAATATG  200

seq1  TAAGTACTACTCAACTAGCACCTCAAACATATCCCCAAATTATAATATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTACTACTCAACTAGCACCTCAAACATATCCCCAAATTATAATATTT  250

seq1  CTTATTATGTACAAATATATAACAAAACTATTCTTGGCCTGTCATGTAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTATGTACAAATATATAACAAAACTATTCTTGGCCTGTCATGTAGA  300

seq1  CCAGACTGACAATGACCTGAATGCCAGATAACAACTCTTAAAACTTTATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGACTGACAATGACCTGAATGCCAGATAACAACTCTTAAAACTTTATG  350

seq1  GTTTTATATGCAAAAGGAGGATACAAAATTGGTAGGCAGTAGGAAGGTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTATATGCAAAAGGAGGATACAAAATTGGTAGGCAGTAGGAAGGTAA  400

seq1  GACAGGAGCTAGCAGGAATTAAGGGGAAGAGTAGAAGGTGAATATGATCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGAGCTAGCAGGAATTAAGGGGAAGAGTAGAAGGTGAATATGATCC  450

seq1  AAATATATAAAATTCTCAAAGAATTAATAAAGTATTACATTAAAATATTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATATAAAATTCTCAAAGAATTAATAAAGTATTACATTAAAATATTC  500

seq1  AGGGTAGTTGTCATGGTCCATTTATAACAAAATGCCTTGCAACAGGCAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTAGTTGTCATGGTCCATTTATAACAAAATGCCTTGCAACAGGCAAT  550

seq1  TTAAAAAGAACATAAATTTATTTCTCACGATTCTAGAATTCC  592
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAGAACATAAATTTATTTCTCACGATTCTAGAATTCC  592


seq1: chrX_164374616_164375550
seq2: B6Ng01-206O04.g_234_1161

seq1  ATCTTCACTCAGTTTCTGGTGACAGCACAGATGACGAACATGGTCCCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCACTCAGTTTCTGGTGACAGCACAGATGACGAACATGGTCCCCTG  50

seq1  CTGCAGCAGGGTCACGGACCCTGACAAGGCCCTCAGAGGCTGCCTGGGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGCAGGGTCACGGACCCTGACAAGGCCCTCAGAGGCTGCCTGGGTT  100

seq1  ATAGACATCAACATAGCAGCTCAGGCCACCCACATCATTATGGCCTCTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGACATCAACATAGCAGCTCAGGCCACCCACATCATTATGGCCTCTGG  150

seq1  AGGCAGCACGGTCCATGGACATTGGCCTTTGATGGTAACCCAGACCACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGCACGGTCCATGGACATTGGCCTTTGATGGTAACCCAGACCACAG  200

seq1  ATATCAACACAGAACCCCAGTCCTCCCAGCTGCAGGAAGGCCTTTGACTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCAACACAGAACCCCAGTCCTCCCAGCTGCAGGAAGGCCTTTGACTC  250

seq1  CAACTCAGCCCTTGATAACAGCAAGGATCCAGACATCTCCATAGCCTCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCAGCCCTTGATAACAGCAAGGATCCAGACATCTCCATAGCCTCAG  300

seq1  GTGACAGCATAGGCCACTCACTTCAATTTGGTCCCCAGTGGCAGCAGAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACAGCATAGGCCACTCACTTCAATTTGGTCCCCAGTGGCAGCAGAGC  350

seq1  CTATAAACATGAGTATAGATAGCTTCGGGGCTTCAGGGTACAGCACAGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAAACATGAGTATAGATAGCTTCGGGGCTTCAGGGTACAGCACAGAC  400

seq1  CAAGGACATCAGAATGTCCTATGTTGAGAACACTGGCCATGGTCATCAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGACATCAGAATGTCCTATGTTGAGAACACTGGCCATGGTCATCAAC  450

seq1  ACAGACCCCAGCTGCAGCAGAACCACAGACCCAGACATGACCCTTGCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACCCCAGCTGCAGCAGAACCACAGACCCAGACATGACCCTTGCTTT  500

seq1  GCTGTTTTTTTTTAATCTTAATACAAATAATATGAGTATCATTAGAAATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTTTTTTTTAATCTTAATACAAATAATATGAGTATCATTAGAAATC  550

seq1  TGCTCTTTGCATGTCTATGATTGTTACCCAATTATTATTACATGGAAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTTTGCATGTCTATGATTGTTACCCAATTATTATTACATGGAAATA  600

seq1  ACATATTACTTTTTCCTTCAGCTATATTCTTACAATGGAACTATGCGTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATTACTTTTTCCTTCAGCTATATTCTTACAATGGAACTATGCGTTT  650

seq1  TTGTCTATTTCACCATTGATGGCTTTTTAAGTTGTTTGATATCTAGGACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTATTTCACCATTGATGGCTTTTTAAGTTGTTTGATATCTAGGACT  700

seq1  ATGACAAAACTTTTATTGATCTTTTATGTCTCTAAATGATCTGATTTTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAAAACTTTTATTGATCTTTTATGTCTCTAAATGATCTGATTTTTC  750

seq1  TTCTCTCC-TTAATCCCTATATCTTGCAGAAACTACCAAATTAGTATGTT  799
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCCTTTAATCCCTATATCTTGCAGAAACTACCAAATTAGTATGTT  800

seq1  TATGGCAAAGATGCCATTCATAGAATTCATATATGTCCAATAACTTTTTA  849
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGC-AAGATGCCATTCATAGAATTCATATATGTCCAATAACTTTTTA  849

seq1  CTGGCTTTTAAAATAAAACTAGAATCCGGATTCCAATAGTCAACTGTTCC  899
      ||||||||| |||||||||||| || | |||| |||||||| |||||| |
seq2  CTGGCTTTT-AAATAAAACTAG-ATTCTGATT-CAATAGTC-ACTGTT-C  894

seq1  CAGTGCTAGGGAGATAGATCAGTCACTAAATTGCTG  935
      |||||||| ||||||||||||||||||||| |||||
seq2  CAGTGCTA-GGAGATAGATCAGTCACTAAA-TGCTG  928


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