BAC Information

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BAC

Clone NameB6Ng01-207K16
ChromosomeX (Build37)
Map Location 106,724,973 - 106,726,036
singlet/doubletsinglet
Overlap genenone
Upstream geneGm379, Brwd3, 5730416F02Rik, Nsbp1, Sh3bgrl, EG622976, LOC100042831, LOC213474
Downstream geneLOC245573, EG634340
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-207K16.bB6Ng01-207K16.g
ACCGA026753GA026754
length1,1761,079
definitionB6Ng01-207K16.b B6Ng01-207K16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttatttagctctgtgccccattttttaatggggttatttgatt
ttatggagtctattcacattattctacatgataacccccagttgtgccag
caccatttgctgaaaatgctgtcttcattccactggatggttttagctcc
cttgtcaaagatcaagtgaccataggtgtgtcatttcatttctgggtctt
caattctattccattggtctacttgtctgttgctataccagtaccatgca
gtttttaatcacaattgctctgtagtacagctgtagttcagacatggtga
ttccaccagaggttcttttatccttgagaagagtttttgctatcctaggt
tttttgttattccagatgaatttgcagatttccctttctaattcgttgaa
gaattgagttggaagtttaatggggattgcattgaatctgtagattgctt
ttggcaagatagccatttttactatattgatcctgccaatccatgagcat
gggagatctttccatcttctgagatcttctttaatttctttcttcagaga
cttgaagttcttatcctacagatctttcactcccttagttagagtcatgc
caaggtattttatagtatttgtgactattgacaaggttgttgtttcccta
attttgttctcagcctgtttatcctatgtgtagagaaagcccattgacta
gtttgagttaatttgatattcagctacttcattgaagctgattatcagtc
taggagttctctggtggaattttaggatcacttatatatactatcattcc
atctacaaaaagtgatattttgatgtcttcctttctattttgtatcccct
tgatctccttttgttgtcaaattgctctgcctaggacttcaagtacaatt
gttgaataggtagtagaaagtgggggagcccttgtctagtcccctgattt
tagtggggatgctttccagccttcctcaccatttacttttgattatggct
actggttggctgtagattgcctttatcatgttagggtatgggcccttgaa
ttcctgaatcttccagacctttatcatggaaatgggtgttggattttgcc
aaatgctttcctcccaacatctaaggaatgatacactgtgcttttgtcct
tgtaattggtataataacacggatca

gaattcttatttctgtgattcctgctcctgtaaacatttctaactacaat
gggaaattcttcagtgattataggactcaagggccacctgttatcttgcc
tataatttcaagaactttgtagtatttctagatcccttcggagaattacc
ttgggatttcagcctctataaaaataaaaatttctcctgtctctgagttc
atggttggaatgttttcataccacagttacatgtctgtttaaataaaatg
cctaggggttagaaaacctttagtaatacagaatgaataacatatgatgt
acaactttataacttcatttaacaataatgtactttatacttactaagag
agtagatacaaactactctaacaacatggaaaaagacaccaatgtgcaag
ctatgtatgttaattttcataactgtaacaatcatttcactatgtacatg
tttatatgagcatacaaaacaaaattaatgtaaacaaatagagaaataca
gtgagaattttagacacaccaagagcaaaagcaacatgtttcaattaaaa
gatattcttctataagagcgtccatatattatataaagtgtcatattttg
aaagtgacaaaattgccaacaataaataaaataaagtattctttaaaacc
aagaaacaaatattttcttagaaaagaaaaggtgatgagtttatcaatac
tacaacggaaaaattcaataccattaaggaacattttcaataattgaact
cccatggataaaatcaataaggacactacagatttggcaaccatagataa
taaatgatcacaaaagacaatcatagagcattctagtcaacagaataaga
ataaaccttgtaatattttcagcactgtcttcaggcttaagtcttattaa
cttaaaggctgaaaatcatagagttgtccactaaatgaagcagatatcat
ggacactatgaaggactccttatggtcactgtaccttcaaagtactatta
cactttttatttttgcatgaattgtatggatttcaactggagccatacac
caggatgccatccctgtcaatcaatttta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_106724973_106726036
seq2: B6Ng01-207K16.g_67_1145 (reverse)

seq1  TAAAA-TGATGGACAGGGAT-GCATC--TGTGTAT-GCTCAGGTTGAA--  43
      ||||| |||| ||||||||| |||||   |||||| ||||  ||||||  
seq2  TAAAATTGATTGACAGGGATGGCATCCTGGTGTATGGCTCCAGTTGAAAT  50

seq1  TCATACAATTCATGCAAAAAT--AAAGTGT-ATAGTACTTTGAAGGTACA  90
       ||||||||||||||||||||  ||||||| |||||||||||||||||||
seq2  CCATACAATTCATGCAAAAATAAAAAGTGTAATAGTACTTTGAAGGTACA  100

seq1  GTGA-CAT-AGGAGTCTTTCATAGTGTCCATGATATCTGCTTCATTTAGT  138
      |||| ||| ||||||| |||||||||||||||||||||||||||||||||
seq2  GTGACCATAAGGAGTCCTTCATAGTGTCCATGATATCTGCTTCATTTAGT  150

seq1  GGACAACTCTATGA-TTTCAGCC-TTAAGTTAATAAGACTTAAG-CTGAA  185
      |||||||||||||| |||||||| |||||||||||||||||||| |||||
seq2  GGACAACTCTATGATTTTCAGCCTTTAAGTTAATAAGACTTAAGCCTGAA  200

seq1  GACAGTGCTGAAAATATTACAAGGTTTATTCTTATTCTGTTGACTAGAAT  235
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTGCTGAAAATATTACAAGGTTTATTCTTATTCTGTTGACTAGAAT  250

seq1  GCTCTATGATTGTCTTTTGTGATCATTTATTATCTATGGTTGCCAAATCT  285
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTATGATTGTCTTTTGTGATCATTTATTATCTATGGTTGCCAAATCT  300

seq1  GTAGTGTCCTTATTGATTTTATCCATGGGAGTTCAATTATTGAAAATGTT  335
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTGTCCTTATTGATTTTATCCATGGGAGTTCAATTATTGAAAATGTT  350

seq1  CCTTAATGGTATTGAATTTTTCCGTTGTAGTATTGATAAACTCATCACCT  385
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAATGGTATTGAATTTTTCCGTTGTAGTATTGATAAACTCATCACCT  400

seq1  TTTCTTTTCTAAGAAAATATTTGTTTCTTGGTTTTAAAGAATACTTTATT  435
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTCTAAGAAAATATTTGTTTCTTGGTTTTAAAGAATACTTTATT  450

seq1  TTATTTATTGTTGGCAATTTTGTCACTTTCAAAATATGACACTTTATATA  485
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTATTGTTGGCAATTTTGTCACTTTCAAAATATGACACTTTATATA  500

seq1  ATATATGGACGCTCTTATAGAAGAATATCTTTTAATTGAAACATGTTGCT  535
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATGGACGCTCTTATAGAAGAATATCTTTTAATTGAAACATGTTGCT  550

seq1  TTTGCTCTTGGTGTGTCTAAAATTCTCACTGTATTTCTCTATTTGTTTAC  585
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTCTTGGTGTGTCTAAAATTCTCACTGTATTTCTCTATTTGTTTAC  600

seq1  ATTAATTTTGTTTTGTATGCTCATATAAACATGTACATAGTGAAATGATT  635
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTTTGTTTTGTATGCTCATATAAACATGTACATAGTGAAATGATT  650

seq1  GTTACAGTTATGAAAATTAACATACATAGCTTGCACATTGGTGTCTTTTT  685
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACAGTTATGAAAATTAACATACATAGCTTGCACATTGGTGTCTTTTT  700

seq1  CCATGTTGTTAGAGTAGTTTGTATCTACTCTCTTAGTAAGTATAAAGTAC  735
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTTGTTAGAGTAGTTTGTATCTACTCTCTTAGTAAGTATAAAGTAC  750

seq1  ATTATTGTTAAATGAAGTTATAAAGTTGTACATCATATGTTATTCATTCT  785
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTGTTAAATGAAGTTATAAAGTTGTACATCATATGTTATTCATTCT  800

seq1  GTATTACTAAAGGTTTTCTAACCCCTAGGCATTTTATTTAAACAGACATG  835
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTACTAAAGGTTTTCTAACCCCTAGGCATTTTATTTAAACAGACATG  850

seq1  TAACTGTGGTATGAAAACATTCCAACCATGAACTCAGAGACAGGAGAAAT  885
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGTGGTATGAAAACATTCCAACCATGAACTCAGAGACAGGAGAAAT  900

seq1  TTTTATTTTTATAGAGGCTGAAATCCCAAGGTAATTCTCCGAAGGGATCT  935
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTTTATAGAGGCTGAAATCCCAAGGTAATTCTCCGAAGGGATCT  950

seq1  AGAAATACTACAAAGTTCTTGAAATTATAGGCAAGATAACAGGTGGCCCT  985
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATACTACAAAGTTCTTGAAATTATAGGCAAGATAACAGGTGGCCCT  1000

seq1  TGAGTCCTATAATCACTGAAGAATTTCCCATTGTAGTTAGAAATGTTTAC  1035
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCCTATAATCACTGAAGAATTTCCCATTGTAGTTAGAAATGTTTAC  1050

seq1  AGGAGCAGGAATCACAGAAATAAGAATTC  1064
      |||||||||||||||||||||||||||||
seq2  AGGAGCAGGAATCACAGAAATAAGAATTC  1079


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