BAC Information

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BAC

Clone NameB6Ng01-208G11
ChromosomeX (Build37)
Map Location 77,724,517 - 77,916,897
singlet/doubletdoublet
Overlap geneLOC100042229, LOC667776, EG629182
Upstream geneEG636104, 2410003J06Rik, LOC667749, LOC211702, LOC667755, LOC211705, LOC654474, LOC629153, LOC546338
Downstream geneTmem47, LOC100041462, LOC100041474, 4930595M18Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-208G11.bB6Ng01-208G11.g
ACCGA027294GA027295
length1,0241,144
definitionB6Ng01-208G11.b B6Ng01-208G11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(77,724,517 - 77,725,451)(77,915,776 - 77,916,897)
sequence
gaattctgattcacttagctaaatcactattggtccaactcagacccaat
atttggatacatattcagaaaagcatatttgtattaacaggaacatgtta
atcttgaaaaaggagtgataaaaatcaaacttcaacctatgatgttaaag
ttagtttttacacattgaaatcctctccacttgggcaacaagtgtggtga
tcttgagcaaactattggaccactactagtttttactttctaatgatcag
tatagaaataataagagcaactaacttagggaatgtctatatgaattaaa
tgaaataataaattctttaaaaacaggagagaatgatcaccatagagtaa
caacagtaattggttgaattctaatgaatatttttgttactattagaagg
gaactgtattcatatgaaataataatatgctataagatctttacttgtga
taaccagaagctggaaacaaaatagatgtcccacaacagaagaatggata
cagaaaatgtagttcatttacacaatggaatactactcagctattaagaa
tgaggacatcctgagttttgcaggcaaatggaatgaattagaaaataaca
tcctgagtgaggtaactcagacccaaaagatcatgcatggtatgtactca
ctaataagtggacattaggaaaacaaacaaacaaaaaaatacggagttcc
caagatacagttcacaaaactgaaaaaggtcaaaaagctgaagtgtccaa
atgaggatgcctcattcccacttgggagataaaggaaaacaatcacaagt
ggagtggaatgaagggacctgggagagaatgtggattggcagggggaaga
ggggaacctgatctggctttgggtgagggaaaaagactgaagccatgcgg
gccagcagaaagaatggaaacagacaacctcagtaaataggaggttaggg
tgaccctccagaatgcacagagacaaggatgtgagagactcttagtacgc
aaaggaggaccttagatgaaatcc

gaattcaattttaagatggagccttctagctatggtaaggtatctcctcc
taagaaagcacaacaacacaaagacctaaatataatatgaccaattccaa
catgagttgatatcccacagtaaatgggaaaaatcatggggccctaaccc
taggtgcagaggtgctagctattaaaatctgctgagacaaagaaaattaa
ctttcctcagatatgagcacatgactaattatctaatatcaaatagtcag
tcctttaacatatgcatttactaaaactgaatatattcagtagattttgt
ttatatatctatttggttatatgaacatgtaatgataatggctaaaggag
aaaatgaatttggaaggtggctaggagcagacaagaaaggcataagaagg
aaataaatgatgcaatgatagtttaataaagtaaaatattccaaagttcc
atctttggaattaataataataataattaaaatcaaagtaaagaattcta
ctattttttctttttgtattttaagcattacataataagtatttgaagca
aattatcacaatcattttggagtttatgttttcttgttcccgatctatag
cacctcatttactaaacccattacccatgttagctgcgagtgtgcttttt
cttgtcattttaaaacttattattgtatttttattctttattgcttattt
tattcttttgacaatttcatacataagcactgtacttatctcattttttt
ccacctcctttctcctagatttcttcccatatcacgtctcccattcagga
cttcttcttttttattagtgttacatatgtatgtatgtatatatatatat
atatatatacatatatatatatatatatatatacacatataaacttaact
tactgagtccatttagtattgcttaaatgcaacatggctttaaaatctga
acatttttgagattgtgttaattttaaaagaagggaattttcgcctgaag
aaggacttcattcctcccaattcttagcagcttgtttacttacctaacag
cttcttcttttcgggtgggtcattattgtgaattttttcctaattactgt
tgtgaatattgactggccacttacctatttttgtcggttttgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_77724517_77725451
seq2: B6Ng01-208G11.b_48_982

seq1  GAATTCTGATTCACTTAGCTAAATCACTATTGGTCCAACTCAGACCCAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGATTCACTTAGCTAAATCACTATTGGTCCAACTCAGACCCAAT  50

seq1  ATTTGGATACATATTCAGAAAAGCATATTTGTATTAACAGGAACATGTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGATACATATTCAGAAAAGCATATTTGTATTAACAGGAACATGTTA  100

seq1  ATCTTGAAAAAGGAGTGATAAAAATCAAACTTCAACCTATGATGTTAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGAAAAAGGAGTGATAAAAATCAAACTTCAACCTATGATGTTAAAG  150

seq1  TTAGTTTTTACACATTGAAATCCTCTCCACTTGGGCAACAAGTGTGGTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTTTTACACATTGAAATCCTCTCCACTTGGGCAACAAGTGTGGTGA  200

seq1  TCTTGAGCAAACTATTGGACCACTACTAGTTTTTACTTTCTAATGATCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGAGCAAACTATTGGACCACTACTAGTTTTTACTTTCTAATGATCAG  250

seq1  TATAGAAATAATAAGAGCAACTAACTTAGGGAATGTCTATATGAATTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGAAATAATAAGAGCAACTAACTTAGGGAATGTCTATATGAATTAAA  300

seq1  TGAAATAATAAATTCTTTAAAAACAGGAGAGAATGATCACCATAGAGTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATAATAAATTCTTTAAAAACAGGAGAGAATGATCACCATAGAGTAA  350

seq1  CAACAGTAATTGGTTGAATTCTAATGAATATTTTTGTTACTATTAGAAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGTAATTGGTTGAATTCTAATGAATATTTTTGTTACTATTAGAAGG  400

seq1  GAACTGTATTCATATGAAATAATAATATGCTATAAGATCTTTACTTGTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGTATTCATATGAAATAATAATATGCTATAAGATCTTTACTTGTGA  450

seq1  TAACCAGAAGCTGGAAACAAAATAGATGTCCCACAACAGAAGAATGGATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCAGAAGCTGGAAACAAAATAGATGTCCCACAACAGAAGAATGGATA  500

seq1  CAGAAAATGTAGTTCATTTACACAATGGAATACTACTCAGCTATTAAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAATGTAGTTCATTTACACAATGGAATACTACTCAGCTATTAAGAA  550

seq1  TGAGGACATCCTGAGTTTTGCAGGCAAATGGAATGAATTAGAAAATAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGACATCCTGAGTTTTGCAGGCAAATGGAATGAATTAGAAAATAACA  600

seq1  TCCTGAGTGAGGTAACTCAGACCCAAAAGATCATGCATGGTATGTACTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAGTGAGGTAACTCAGACCCAAAAGATCATGCATGGTATGTACTCA  650

seq1  CTAATAAGTGGACATTAGGAAAACAAACAAACAAAAAAATACGGAGTTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATAAGTGGACATTAGGAAAACAAACAAACAAAAAAATACGGAGTTCC  700

seq1  CAAGATACAGTTCACAAAACTGAAAAAGGTCAAAAAGCTGAAGTGTCCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATACAGTTCACAAAACTGAAAAAGGTCAAAAAGCTGAAGTGTCCAA  750

seq1  ATGAGGATGCCTCATTCCCACTTGGGAGATAAAGGAAAACAATCACAAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGATGCCTCATTCCCACTTGGGAGATAAAGGAAAACAATCACAAGT  800

seq1  GGAGTGGAATGAAGGGACCTGGGAGAGAATGTGGATTGGCAGGGGGAAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTGGAATGAAGGGACCTGGGAGAGAATGTGGATTGGCAGGGGGAAGA  850

seq1  GGGGAACCTGATCTGGCTTTGGGTGAGGGAAAAAGACTGAAGCCATGCGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAACCTGATCTGGCTTTGGGTGAGGGAAAAAGACTGAAGCCATGCGG  900

seq1  GCCAGCAGAAAGAATGGAAACAGACAACCTCAGTA  935
      |||||||||||||||||||||||||||||||||||
seq2  GCCAGCAGAAAGAATGGAAACAGACAACCTCAGTA  935


seq1: chrX_77915776_77916897
seq2: B6Ng01-208G11.g_63_1206 (reverse)

seq1  AACAAAACCGGC-AAAATA-GACAGT-GCCAGTCAATA-TCACAACAGTA  46
      |||||||||| | |||||| |  ||| ||||||||||| |||||||||||
seq2  AACAAAACCGACAAAAATAGGTAAGTGGCCAGTCAATATTCACAACAGTA  50

seq1  A-TAGGAAAAA--TCAC-ATAATGACCCACCCCGAAAGGAAG-AGCTG-T  90
      | |||||||||  |||| ||||||||||| ||||||| |||| ||||| |
seq2  ATTAGGAAAAAATTCACAATAATGACCCA-CCCGAAAAGAAGAAGCTGTT  99

seq1  AGGT-AGTAAAC-AGCTGCTAAG-ATTGGGA-GAATG-AGTCCTTCTTCA  135
      |||| ||||||| |||||||||| ||||||| ||||| ||||||||||||
seq2  AGGTAAGTAAACAAGCTGCTAAGAATTGGGAGGAATGAAGTCCTTCTTCA  149

seq1  -GCGAAAA-TCCCT--CTGTAAAATT-ACACAATCTC-AAAATGTTCAGA  179
       ||||||| |||||   | ||||||| |||||||||| ||||||||||||
seq2  GGCGAAAATTCCCTTCTTTTAAAATTAACACAATCTCAAAAATGTTCAGA  199

seq1  -TTTAAAGCCATG-TGCATTTAAGCAATACTAAATGGACTCAGTAAGTTA  227
       |||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAGCCATGTTGCATTTAAGCAATACTAAATGGACTCAGTAAGTTA  249

seq1  AGTTTATATGTATATATATATATATATATATATATGTATATATATATATA  277
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AGTTTATATGTGTATATATATATATATATATATATGTATATATATATATA  299

seq1  TATATATACATACATACATATGTAACACTAATAAAAAAGAAGAAGTCCTG  327
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATACATACATACATATGTAACACTAATAAAAAAGAAGAAGTCCTG  349

seq1  AATGGGAGACGTGATATGGGAAGAAATCTAGGAGAAAGGAGGTGGAAAAA  377
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGAGACGTGATATGGGAAGAAATCTAGGAGAAAGGAGGTGGAAAAA  399

seq1  AATGAGATAAGTACAGTGCTTATGTATGAAATTGTCAAAAGAATAAAATA  427
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGATAAGTACAGTGCTTATGTATGAAATTGTCAAAAGAATAAAATA  449

seq1  AGCAATAAAGAATAAAAATACAATAATAAGTTTTAAAATGACAAGAAAAA  477
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATAAAGAATAAAAATACAATAATAAGTTTTAAAATGACAAGAAAAA  499

seq1  GCACACTCGCAGCTAACATGGGTAATGGGTTTAGTAAATGAGGTGCTATA  527
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACTCGCAGCTAACATGGGTAATGGGTTTAGTAAATGAGGTGCTATA  549

seq1  GATCGGGAACAAGAAAACATAAACTCCAAAATGATTGTGATAATTTGCTT  577
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCGGGAACAAGAAAACATAAACTCCAAAATGATTGTGATAATTTGCTT  599

seq1  CAAATACTTATTATGTAATGCTTAAAATACAAAAAGAAAAAATAGTAGAA  627
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATACTTATTATGTAATGCTTAAAATACAAAAAGAAAAAATAGTAGAA  649

seq1  TTCTTTACTTTGATTTTAATTATTATTATTATTAATTCCAAAGATGGAAC  677
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTACTTTGATTTTAATTATTATTATTATTAATTCCAAAGATGGAAC  699

seq1  TTTGGAATATTTTACTTTATTAAACTATCATTGCATCATTTATTTCCTTC  727
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAATATTTTACTTTATTAAACTATCATTGCATCATTTATTTCCTTC  749

seq1  TTATGCCTTTCTTGTCTGCTCCTAGCCACCTTCCAAATTCATTTTCTCCT  777
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGCCTTTCTTGTCTGCTCCTAGCCACCTTCCAAATTCATTTTCTCCT  799

seq1  TTAGCCATTATCATTACATGTTCATATAACCAAATAGATATATAAACAAA  827
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCCATTATCATTACATGTTCATATAACCAAATAGATATATAAACAAA  849

seq1  ATCTACTGAATATATTCAGTTTTAGTAAATGCATATGTTAAAGGACTGAC  877
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACTGAATATATTCAGTTTTAGTAAATGCATATGTTAAAGGACTGAC  899

seq1  TATTTGATATTAGATAATTAGTCATGTGCTCATATCTGAGGAAAGTTAAT  927
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGATATTAGATAATTAGTCATGTGCTCATATCTGAGGAAAGTTAAT  949

seq1  TTTCTTTGTCTCAGCAGATTTTAATAGCTAGCACCTCTGCACCTAGGGTT  977
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTGTCTCAGCAGATTTTAATAGCTAGCACCTCTGCACCTAGGGTT  999

seq1  AGGGCCCCATGATTTTTCCCATTTACTGTGGGATATCAACTCATGTTGGA  1027
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCCCCATGATTTTTCCCATTTACTGTGGGATATCAACTCATGTTGGA  1049

seq1  ATTGGTCATATTATATTTAGGTCTTTGTGTTGTTGTGCTTTCTTAGGAGG  1077
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGTCATATTATATTTAGGTCTTTGTGTTGTTGTGCTTTCTTAGGAGG  1099

seq1  AGATACCTTACCATAGCTAGAAGGCTCCATCTTAAAATTGAATTC  1122
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACCTTACCATAGCTAGAAGGCTCCATCTTAAAATTGAATTC  1144


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