BAC Information

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BAC

Clone NameB6Ng01-208M14
ChromosomeX (Build37)2 (Build37)
Map Location 159,163,006 - 159,163,521170,777,331 - 170,778,431
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneRai2, Gm47, Nhs, Reps2, LOC654358, LOC100041557, LOC667630
Downstream geneRbbp7, 4932441K18Rik, LOC671250, Syap1, LOC100041607, Ctps2, S100g, LOC100040610, EG637051, Grpr
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-208M14.bB6Ng01-208M14.g
ACCGA027573GA027574
length8371,104
definitionB6Ng01-208M14.b B6Ng01-208M14.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(159,163,006 - 159,163,521)(170,777,331 - 170,778,431)
sequence
gaattctcaaaagaaatgtgagagattttacttgtaattttctaaatcat
gtttgaaacataatccccaaaatcatgttaatgggcctcataggtgagcc
cttggtgactaaatagcatggaatgagattactaagggggtagggcatgg
tggcttcacaggctccataaaaggagacaactaaggcagcacagctgaag
ggcctcacttggtgctggagccatctatctccttgaacttcccagcctcc
cgaactgtgtcctaaatggcctttaattattctttttttttttttttttt
ttttccattttttattaggtatttagctcatttacatttccaatgctata
ccaaaagacccccttacccacccacccccactcccctacccacccactcc
ccccctttggccctggcgttcccctgtaccggggcacacaaagtctgcgt
gtccaatgggcctctctttccagtgatggccgactaggccatcttttgat
acatatgcagctagagtcaagagctcaggggtactggttagttcataatg
ttgttccacctatagggttgaagatccctttagctccttgggtactttct
ctagctcctccattgggagccctgtgatccatccattagctgactgtgag
catccacttctgtgtttgctaggccccggcatagtctcacaagagacagc
tacatctgggtccttttcagtaaaatcttgctagtgtatgcaatggtgtc
agcatttgggagctgatttatggggtggatctcctggatatggcagtctc
tacatgggtccatccttttcatctcagctccatactt
gaattccctgaaataataaagacattggaggttttgattttgaatgtttt
ttttcccatttatgggttttgttttaagataagttattatttctctgtgt
tgtaaactactataggaataaactttgaattatttctgagaaaattaata
aataagccaaatcacttacagatgtccacattcttagtagaattagattc
aaatatcaagttttactcttaacaaatacacgaacaattgatgtaatatt
cttgctcatttggttttagtgttgagaagacaaactttcataacagattg
cttaatattgcgcttggtaaaattttgctgaaagtgcaactaagcaacca
acttcttgaattatttaatattattcttgtttttttggcacatggctgaa
ctgttttagaaatatttgcaaagagattagagaaggcatgaccctctccc
aacataccagatgtttaaaaaaaaaaccatatctttaaagatcttcttta
aagcaagaagttctgttgtggtggtttgaataagaatggcccttgcaggc
tcatacaacattttaatgctttgccatcagcaagtatcattatttagaag
gactaggaggtgtggccttgttggggtaggtgtggccttcttggaggcag
tgtgtcactgtgagggtgggctgaggttttagaattacaaaccagccctg
atggccctttcttctcccgaagcctgagatgtacatgtctcagctactta
cttctccagcatcctgactgcctgcgtgctgccctgctctctaccatgct
tgcaatgaactcaacttctgaaaccgtaagtgagcctcacctaatccttt
tataagagataccttggtcactgggtctcttcaacacagtagaatatggg
actaactcagcttatgtggtcttaatacttggtaggtgttcagcaaatgt
acatagtgttgataatctatgggacttgggatcttagtgcttccaaacac
agaatcaccagcattaaatttagaacacgtagaaatgatgagatatggag
aatggtgtttgaaggtgtgctggtttaaagttgcctctgtttccacagga
ggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_159163006_159163521
seq2: B6Ng01-208M14.b_324_839

seq1  TTATTCTTTTTTTTTTCTTTGTCTTTTTTTTCCATTTTTTATTAGGTATT  50
      |||||||||||||||| |||   |||||||||||||||||||||||||||
seq2  TTATTCTTTTTTTTTTTTTT---TTTTTTTTCCATTTTTTATTAGGTATT  47

seq1  TAGCTCATTTACATTTCCAATGCTATACTAAAAGTCCCCCATACCCACCC  100
      |||||||||||||||||||||||||||| ||||| ||||| |||||||||
seq2  TAGCTCATTTACATTTCCAATGCTATACCAAAAGACCCCCTTACCCACCC  97

seq1  ACCCCCACTCCCCTACCCACCCACTCCCCCTTTTTGGCCCTGGCGTTCCC  150
      ||||||||||||||||||||||||||||||  ||||||||||||||||||
seq2  ACCCCCACTCCCCTACCCACCCACTCCCCCCCTTTGGCCCTGGCGTTCCC  147

seq1  CTGTACTGGGGCATACAAAGTTTGCGTGTCCAATGGGCCTCTCTTTCCAG  200
      |||||| |||||| ||||||| ||||||||||||||||||||||||||||
seq2  CTGTACCGGGGCACACAAAGTCTGCGTGTCCAATGGGCCTCTCTTTCCAG  197

seq1  TGATGGCCGATTAGGCCATCTTTTGTTACATATGAAGCTAGAGTCAAGAG  250
      |||||||||| |||||||||||||| |||||||| |||||||||||||||
seq2  TGATGGCCGACTAGGCCATCTTTTGATACATATGCAGCTAGAGTCAAGAG  247

seq1  ATCCGGGGTACTGGTTAGTTCATAATGTTGTTCCACCTATAGGGTTGCAG  300
       || ||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CTCAGGGGTACTGGTTAGTTCATAATGTTGTTCCACCTATAGGGTTGAAG  297

seq1  ATCCCTTTAGCTCCTTGGCTACTTTCTCTAGCTCCTCCATTGGGAGCCCT  350
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  ATCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGGAGCCCT  347

seq1  ATGATCCATCCATTAGCTGACTGTGAGCATCCACTTCTGTGTTTGCTAGG  400
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATCCATCCATTAGCTGACTGTGAGCATCCACTTCTGTGTTTGCTAGG  397

seq1  CCCCGGCATAGTCTCACAAGAGACAGCTACATCTGGGTCC-TTTCAATAA  449
      |||||||||||||||||||||||||||||||||||||||| ||||| |||
seq2  CCCCGGCATAGTCTCACAAGAGACAGCTACATCTGGGTCCTTTTCAGTAA  447

seq1  AATCTTGCTAGTGTATGCAATGGTGTCAGCGTTTGGATGCTGA-TTATGG  498
      |||||||||||||||||||||||||||||| |||||  ||||| ||||||
seq2  AATCTTGCTAGTGTATGCAATGGTGTCAGCATTTGGGAGCTGATTTATGG  497

seq1  GGTGGATC-CCTGGATATG  516
      |||||||| ||||||||||
seq2  GGTGGATCTCCTGGATATG  516

seq1: chr2_170777331_170778431
seq2: B6Ng01-208M14.g_67_1170

seq1  GAATTCCCTGAAATAATAAAGACATTGGAGGTTTTGATTTTGAATGTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTGAAATAATAAAGACATTGGAGGTTTTGATTTTGAATGTTTT  50

seq1  TTTTCCCATTTATGGGTTTTGTTTTAAGATAAGTTATTATTTCTCTGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCCATTTATGGGTTTTGTTTTAAGATAAGTTATTATTTCTCTGTGT  100

seq1  TGTAAACTACTATAGGAATAAACTTTGAATTATTTCTGAGAAAATTAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAACTACTATAGGAATAAACTTTGAATTATTTCTGAGAAAATTAATA  150

seq1  AATAAGCCAAATCACTTACAGATGTCCACATTCTTAGTAGAATTAGATTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGCCAAATCACTTACAGATGTCCACATTCTTAGTAGAATTAGATTC  200

seq1  AAATATCAAGTTTTACTCTTAACAAATACACGAACAATTGATGTAATATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATCAAGTTTTACTCTTAACAAATACACGAACAATTGATGTAATATT  250

seq1  CTTGCTCATTTGGTTTTAGTGTTGAGAAGACAAACTTTCATAACAGATTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTCATTTGGTTTTAGTGTTGAGAAGACAAACTTTCATAACAGATTG  300

seq1  CTTAATATTGCGCTTGGTAAAATTTTGCTGAAAGTGCAACTAAGCAACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATATTGCGCTTGGTAAAATTTTGCTGAAAGTGCAACTAAGCAACCA  350

seq1  ACTTCTTGAATTATTTAATATTATTCTTGTTTTTTTGGCACATGGCTGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTTGAATTATTTAATATTATTCTTGTTTTTTTGGCACATGGCTGAA  400

seq1  CTGTTTTAGAAATATTTGCAAAGAGATTAGAGAAGGCATGACCCTCTCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTTAGAAATATTTGCAAAGAGATTAGAGAAGGCATGACCCTCTCCC  450

seq1  AACATACCAGATGTTTAAAAAAAAAACCATATCTTTAAAGATCTTCTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATACCAGATGTTTAAAAAAAAAACCATATCTTTAAAGATCTTCTTTA  500

seq1  AAGCAAGAAGTTCTGTTGTGGTGGTTTGAATAAGAATGGCCCTTGCAGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAGAAGTTCTGTTGTGGTGGTTTGAATAAGAATGGCCCTTGCAGGC  550

seq1  TCATACAACATTTTAATGCTTTGCCATCAGCAAGTATCATTATTTAGAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATACAACATTTTAATGCTTTGCCATCAGCAAGTATCATTATTTAGAAG  600

seq1  GACTAGGAGGTGTGGCCTTGTTGGGGTAGGTGTGGCCTTCTTGGAGGCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAGGAGGTGTGGCCTTGTTGGGGTAGGTGTGGCCTTCTTGGAGGCAG  650

seq1  TGTGTCACTGTGAGGGTGGGCTGAGGTTTTAGAATTACAAACCAGCCCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCACTGTGAGGGTGGGCTGAGGTTTTAGAATTACAAACCAGCCCTG  700

seq1  ATGGCCCTTTCTTCTCCCGAAGCCTGAGATGTACATGTCTCAGCTACTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCCTTTCTTCTCCCGAAGCCTGAGATGTACATGTCTCAGCTACTTA  750

seq1  CTTCTCCAGCATCCTGACTGCCTGCGTGCTGCCCTGCTCTCTACCATGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCCAGCATCCTGACTGCCTGCGTGCTGCCCTGCTCTCTACCATGCT  800

seq1  TGCAATGAACTCAACTTCTGAAACCGTAAGTGAGCCTCACCTAATCCTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATGAACTCAACTTCTGAAACCGTAAGTGAGCCTCACCTAATCCTTT  850

seq1  TATAAGAGATACCTTGGTCACTGGGTCTCTTCACCACAGTAGAATAT-GG  899
      ||||||||||||||||||||||||||||||||| ||||||||||||| ||
seq2  TATAAGAGATACCTTGGTCACTGGGTCTCTTCAACACAGTAGAATATGGG  900

seq1  ACTAACTCAGCTTATGTGGTCTT-ATACTTGGTAGGTGTTCAGCAAATGT  948
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  ACTAACTCAGCTTATGTGGTCTTAATACTTGGTAGGTGTTCAGCAAATGT  950

seq1  ACATAGTGTTGAT-ATCTAT-GGACTT-GGATCTTAGTGCTTCCAAACCA  995
      ||||||||||||| |||||| |||||| ||||||||||||||||||| ||
seq2  ACATAGTGTTGATAATCTATGGGACTTGGGATCTTAGTGCTTCCAAA-CA  999

seq1  CAGAATCAACAGCATTAAATTTAG-ACACGTAGACATGATGAGATATTGG  1044
      |||||||| ||||||||||||||| ||||||||| ||||||||||| |||
seq2  CAGAATCACCAGCATTAAATTTAGAACACGTAGAAATGATGAGATA-TGG  1048

seq1  AGGAATGGTGTTTGAAGGTGTGCTGTTTAAAAGGTTTGCTCTG-TTCCAC  1093
      | ||||||||||||||||||||||| || ||| |||  ||||| ||||||
seq2  A-GAATGGTGTTTGAAGGTGTGCTGGTTTAAA-GTTGCCTCTGTTTCCAC  1096

seq1  AGGAGGGA  1101
      ||||||||
seq2  AGGAGGGA  1104