BAC Information

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BAC

Clone NameB6Ng01-209D15
ChromosomeX (Build37)
Map Location 30,998,094 - 30,999,183
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039481, LOC100039224, LOC100039500, LOC100040448, LOC100040458, LOC100040467, EG546176, LOC100040482, LOC629997, 1700017G21Rik, LOC665014, EG546205, LOC100040533
Downstream geneLOC100039328, LOC100040552, LOC100040575, LOC100040585, LOC100039362, LOC100040606, LOC100040612, LOC673784, LOC100040650, LOC100040662, LOC100039419, LOC100039429, LOC100040698, LOC630028, LOC100040722, LOC100040732, LOC100040743
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-209D15.bB6Ng01-209D15.g
ACCGA027899GA027900
length1,0871,172
definitionB6Ng01-209D15.b B6Ng01-209D15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
ttatctaaacagtcccaggtgccaagtggagacaagaaggtgagggtgac
actgctcccatcaaagggtcagccagatcttcagggtgagagttgatgaa
ggtctggtttcccacagtttggtctctcacaagtggtaattaagaagaga
ccagcatcattgagttgaagtcttctgggaagtattttctgagagcagaa
agaagctatgctccagagatagcccaggttgtaacttctgttgcagctgg
agttggtaatttgtaagaatcacccagatggtactggttttgaagaccta
atggtgtcttggataacagctgaggcttggcagtagttgagacttgtaac
catgaagagagcctatgagaggctattggtaaagcctagttgtagcagaa
gacccaagagtattggagatgccagtacaatgggatgatcaccaaaaaca
gcagcagcaaaccacccccacagtgacacacctactccaatcaggccaca
ccaccactccctgggccaagcatatacaaaccatcacagcactatagatg
agttgtttattagtgtttaggtatatccttacccagatgagcaatccatt
tggcagtatcctcatgtagaaataaaatgctgaggcaaagaatattgatt
ttctgggcaatattgcctttgtgaattcattgctaaccctagtgtccaaa
gcacatgacaacagtaaagatcctatcttgcccctcccaccatatgatta
acgtcattaataaattttctgctgtctcaagcaaattcattggaggttaa
ataccttaacattcagctggatggtgatggctcatgcctttaatcccaga
actcaggaggcaaatctaggcatatctctgagtttgaggtcagcctggtc
tatatagtatgtctcagacagccagggctacagggagagaacctgtcttg
gaaaacaaataaaataatacaaatataaatataaacaaacaatgcacatt
cttaactggaaagtatttggctatagatgctgaatgaaagccttttctaa
agctaaactataatgctgtcagcatgggtaatttatc
gaattcttaactgaggaatactgaatggctaagaagcacctgaaaaaatg
ttcaacatccttaatcatcaggaaaatgcaaatcaaaacaaccctgagat
tccaccaaacaccagtcagaatgtctaagatcaaaaattcaggtgacagc
agatactggcaaggatgtggagaaagaagaacactcctccattgctgatg
agattgcaagcttgtacgaccactctggaaatcagtctggcagttcctca
gaaaattggacatagaactactggatgatgcagcaatacctctcctgggc
atatacccagaagatgttccaactggtaataagtacacatgctccactat
gttcatagcagccttatttataataaccagaagctggaaagaacccagat
gcccctcaacagaagaatgcatacagaatatgtggtacatttacacaatg
gagtactactcagctgttaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtagcacaatcacaaa
agtcactagatatgccctcactggtaagtggatattagcccagaaactta
gaatacccaagatactgtgggttattgggctatgcacagacagtctggtc
tccagttaagctgaggtctgaacctaaaaaatggtgataattcaccttca
tgacatagtaggagtgaatttccctcatgctcctggaactctggctcctg
ccttagttaccgacccccacagcccttacaagagaagcatggctagaagt
catgtaggcaatggcccaagcttctgaccttcagctaaactcctccccag
ttacctagcaacagtaaaggccataaaaagggttgttcagcccctgcttg
ctctcttacttgtctcttacttatttctcactctcttacctcttacccct
ctctctcagcccctctccctctctttgtctctctctctctctctctttct
ctcctctactctctttcttctagcccttctctctgtctctctctctttct
acttctctctttctctgctttctacaataaagttctaaacatagcagtct
ctgctcatctgatctgcttggctcactctcacaggtgatgagccctttcc
ctcaaatcccgtcttctttcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_30998094_30999183
seq2: B6Ng01-209D15.b_53_1139 (reverse)

seq1  GATAAATTACTAATTGCTGACAGCA-TATAGTTTAGCTTTAGAAAAGGCT  49
      ||||||||||  | ||||||||||| ||||||||||||||||||||||||
seq2  GATAAATTACCCA-TGCTGACAGCATTATAGTTTAGCTTTAGAAAAGGCT  49

seq1  TTCATTCAGCATCTATAGCCAAATACTTTCCAGTTAAGAATGTTGCATTG  99
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TTCATTCAGCATCTATAGCCAAATACTTTCCAGTTAAGAATG-TGCATTG  98

seq1  TTTTGTTTATATTTATATTTGTATTATTTTATTTGTTTTCCAAGACAGGA  149
       |||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  -TTTGTTTATATTTATATTTGTATTATTTTATTTGTTTTCCAAGACAGGT  147

seq1  TCTCTCCCTGTAGCCCTGGCTGTCCTGAGACATACTATATAGACCAGGCT  199
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TCTCTCCCTGTAGCCCTGGCTGT-CTGAGACATACTATATAGACCAGGCT  196

seq1  GACCTCAAACTCAGAGATATGCCTAGATTTGCCTCCTGAGTTCTGGGATT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTCAAACTCAGAGATATGCCTAGATTTGCCTCCTGAGTTCTGGGATT  246

seq1  AAAGGCATGAGCCATCACCATCCAGCTGAATGTTAAGATATTTAACCTCC  299
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AAAGGCATGAGCCATCACCATCCAGCTGAATGTTAAGGTATTTAACCTCC  296

seq1  AATGAATTTGCTTGAGACAGCAGAAAATTTATTAATGACGTTAATCATAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAATTTGCTTGAGACAGCAGAAAATTTATTAATGACGTTAATCATAT  346

seq1  GGTGGGAGGGGCAAGATAGGATCTTTACTGTTGTCATGTGCTTTGGACAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGAGGGGCAAGATAGGATCTTTACTGTTGTCATGTGCTTTGGACAC  396

seq1  TAGGGTTAGCAATGAATTCACAAAGGCCATATTGCCCAGAAAATCAATAT  449
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TAGGGTTAGCAATGAATTCACAAAGGCAATATTGCCCAGAAAATCAATAT  446

seq1  TCTTTGCCTCAGCATTTTATTTCTACATGAGGATACTGCCAAATGGATTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGCCTCAGCATTTTATTTCTACATGAGGATACTGCCAAATGGATTG  496

seq1  CTCATCTGGGTAAGGATATACCTAAACACTAATAAACAACTCATCTATAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCTGGGTAAGGATATACCTAAACACTAATAAACAACTCATCTATAG  546

seq1  TGCTGTGATGGTTTGTATATGCTTGGCCCAGGGAGTGGTGGTGTGGCCTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTGATGGTTTGTATATGCTTGGCCCAGGGAGTGGTGGTGTGGCCTG  596

seq1  ATTGGAGTAGGTGTGTCACTGTGGGGGTGGTTTGCTGCTGCTGTTTTTGG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGAGTAGGTGTGTCACTGTGGGGGTGGTTTGCTGCTGCTGTTTTTGG  646

seq1  TGATCATCCCATTGTACTGGCATCTCCAATACTCTTGGGTCTTCTGCTAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCATCCCATTGTACTGGCATCTCCAATACTCTTGGGTCTTCTGCTAC  696

seq1  AACTAGGCTTTACCAATAGCCTCTCATAGGCTCTCTTCATGGTTACAAGT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAGGCTTTACCAATAGCCTCTCATAGGCTCTCTTCATGGTTACAAGT  746

seq1  CTCAACTACTGCCAAGCCTCAGCTGTTATCCAAGACACCTTTATGTCTTC  799
      ||||||||||||||||||||||||||||||||||||||| ||| ||||||
seq2  CTCAACTACTGCCAAGCCTCAGCTGTTATCCAAGACACCATTAGGTCTTC  796

seq1  AAAACCAGTACCATCTGGGTGATTCTTACAAATTACCACCTCCAGCTGCA  849
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AAAACCAGTACCATCTGGGTGATTCTTACAAATTACCAACTCCAGCTGCA  846

seq1  ACAGAAGATACAACCTGGGCTATCTCTGGAGCATAGCTTCTTTCTGCTCT  899
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAGTTACAACCTGGGCTATCTCTGGAGCATAGCTTCTTTCTGCTCT  896

seq1  CAGAAAATACTTCCCAGAAGACTTCAACTCAATGATGCTGGTCTCTTCTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAATACTTCCCAGAAGACTTCAACTCAATGATGCTGGTCTCTTCTT  946

seq1  AATTACCACTTGTGAGAGACCAAACTGTGGGAAACCAGACCTTCATCAAC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACCACTTGTGAGAGACCAAACTGTGGGAAACCAGACCTTCATCAAC  996

seq1  TCTCACCCTGAAGATCTGGCTGACCCTTTGATGGGAGCAGTGTCACCCTC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACCCTGAAGATCTGGCTGACCCTTTGATGGGAGCAGTGTCACCCTC  1046

seq1  ACCTTCTTGTCTCCACTTGGCACCTGGGACTGTTTAGATAA  1090
      |||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCTTGTCTCCACTTGGCACCTGGGACTGTTTAGATAA  1087