BAC Information

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BAC

Clone NameB6Ng01-211O02
ChromosomeX (Build37)
Map Location 66,953,339 - 67,150,556
singlet/doubletdoublet
Overlap geneAff2
Upstream geneFmr1, Fmr1nb, LOC100040244, EG627927, LOC666882, LOC671950, LOC100040255, EG666577
Downstream gene1700020N15Rik, Ids, 1110012L19Rik, 4930567H17Rik, LOC100040304, LOC628002, LOC628012, BC023829, EG547447, LOC666981, LOC100040409, LOC628053, LOC100040432, EG280121, LOC666993
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-211O02.bB6Ng01-211O02.g
ACCGA029822GA029823
length1,048965
definitionB6Ng01-211O02.b B6Ng01-211O02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,150,011 - 67,150,556)(66,953,339 - 66,954,244)
sequence
gaattcccttctgacagttttcaggctggaaggtttgtgtagttatggga
agattcaattctatgcatatcagggtctgggggaaggctttaaaagcagt
gatggaaagctacagtacaatggtgacatgaaggaagggagatccatagt
ctcatagttttctctagagctcttagagaatctgaggtagtgactgtcac
tgttggccctttctggaaatcgacatctgcatacacagcacaaaagccac
aatgggtcattttactaggactaggggcaattcacacaaaaacactaagc
tatgctaggttttgccttttcacttccaaacatgggcagttacaacaaca
aacaacaacaaaatcagttgcaattaagaatgtccttgctaatgtagaaa
aacaagtattaattcaattaagcctcaaacttgggtacattagcttccta
aatctgtcatgaaaataggaactctgtagagccattcttctggagtgtgc
tggtgtgctggaagagcagcacaagtggaaatgatgggagatgaactgcc
tgcttccttgttctccaatcccattttcacttgaaagaggaaatactgtg
atagtgtcaacttgagtatttactgacattttctttaaaaggaacaaact
aagtctgccacctcagggaaaacaatgagtggaagtttgttttcagtgat
aaaaactgaacgttcagggaaaagtgtgtgggtttttttttttaaacttg
gactcctacactcacagtaagcttgacagttccctgattcttaaaaagac
attcctgctcaacatgtcagatctgtggtgatatttaaaaaaaatctttt
acagtattttgtaatgaaaagttctattcgtatgttctaagtgctcaaat
gcacaattgctataaaataatgactatttaaagacccttttcgaaggtgc
aagacaaattatttttatattccagtacacaaattctattaatattttag
aatattttatatttggccattatttcaaaaccatttctttttgacatt
gaattcctaaagagctggtggtcttctgtctatgttgagaacatagatag
cttttattatcagctaaggaatatctcaacaacagaatgaatgcacttgc
caatgaaaccaaggataagccatcaagcaaaaccttcccttttacatgtc
ctttaacgtggactgttatcagaaggtatgacccagatttagggttcctc
ctcaaatgattcaattaagaatatccctcacgtgctcagatgcttgggtc
ttaactgatttaaatgtagccaatcaagttgacaataaaaattagccatt
agctataacagtgtgtgtgtgtatgtgtgtgtgtctaaaaacaataatta
aagaagaataggtgatgaatttgaaagactatcaggggcatagggcagta
aaaaaagagagagattgttacttgtttgtgtgttttcagggctgaccatt
tactattgtgtagctaattgtgttctttcctcagtaagactatttctccc
actcccctcatttctcagttgcctgtagttctttgtatagggttgaaacc
tcacgatccttgatccttcccttgtctaccctgccatgtctactattatt
aatcttgttccactgacattaggcagtcatactggtgagattttatgtgt
gtagcctctgacattgttaggagacacagtgtcacagaaaagtgcctggt
cctctggctcttattctgccctcttttctgcaatagtccctgagccccag
gtatgggagatgtgggcgtgcattttgattggttggagttctgtagtggc
ctccatgtttcaaagagaagttttccttgatgagaattgagggactacat
tttacctgtggaaattaaaggacaaatatttcagaatatagttaaggatt
tatgctagtttaagaaaagtgacaattggtagggttcctccaaaaatcct
caaggttttacaaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_67150011_67150556
seq2: B6Ng01-211O02.b_49_594 (reverse)

seq1  GTTCATCTCCCATCATTTCCACTTGTGCTGCTCTTCCAGCACACCAGCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATCTCCCATCATTTCCACTTGTGCTGCTCTTCCAGCACACCAGCAC  50

seq1  ACTCCAGAAGAATGGCTCTACAGAGTTCCTATTTTCATGACAGATTTAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCAGAAGAATGGCTCTACAGAGTTCCTATTTTCATGACAGATTTAGG  100

seq1  AAGCTAATGTACCCAAGTTTGAGGCTTAATTGAATTAATACTTGTTTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTAATGTACCCAAGTTTGAGGCTTAATTGAATTAATACTTGTTTTTC  150

seq1  TACATTAGCAAGGACATTCTTAATTGCAACTGATTTTGTTGTTGTTTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTAGCAAGGACATTCTTAATTGCAACTGATTTTGTTGTTGTTTGTT  200

seq1  GTTGTAACTGCCCATGTTTGGAAGTGAAAAGGCAAAACCTAGCATAGCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTAACTGCCCATGTTTGGAAGTGAAAAGGCAAAACCTAGCATAGCTT  250

seq1  AGTGTTTTTGTGTGAATTGCCCCTAGTCCTAGTAAAATGACCCATTGTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTTTTGTGTGAATTGCCCCTAGTCCTAGTAAAATGACCCATTGTGG  300

seq1  CTTTTGTGCTGTGTATGCAGATGTCGATTTCCAGAAAGGGCCAACAGTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGTGCTGTGTATGCAGATGTCGATTTCCAGAAAGGGCCAACAGTGA  350

seq1  CAGTCACTACCTCAGATTCTCTAAGAGCTCTAGAGAAAACTATGAGACTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCACTACCTCAGATTCTCTAAGAGCTCTAGAGAAAACTATGAGACTA  400

seq1  TGGATCTCCCTTCCTTCATGTCACCATTGTACTGTAGCTTTCCATCACTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATCTCCCTTCCTTCATGTCACCATTGTACTGTAGCTTTCCATCACTG  450

seq1  CTTTTAAAGCCTTCCCCCAGACCCTGATATGCATAGAATTGAATCTTCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAAAGCCTTCCCCCAGACCCTGATATGCATAGAATTGAATCTTCCC  500

seq1  ATAACTACACAAACCTTCCAGCCTGAAAACTGTCAGAAGGGAATTC  546
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTACACAAACCTTCCAGCCTGAAAACTGTCAGAAGGGAATTC  546

seq1: chrX_66953339_66954244
seq2: B6Ng01-211O02.g_67_979

seq1  GAATTCCTAAAGAGCTGGTGGTCTTCTGTCTATGTTGAGAACATAGATAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAAAGAGCTGGTGGTCTTCTGTCTATGTTGAGAACATAGATAG  50

seq1  CTTTTATTATCAGCTAAGGAATATCTCAACAACAGAATGAATGCACTTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTATTATCAGCTAAGGAATATCTCAACAACAGAATGAATGCACTTGC  100

seq1  CAATGAAACCAAGGATAAGCCATCAAGCAAAACCTTCCCTTTTACATGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGAAACCAAGGATAAGCCATCAAGCAAAACCTTCCCTTTTACATGTC  150

seq1  CTTTAACGTGGACTGTTATCAGAAGGTATGACCCAGATTTAGGGTTCCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAACGTGGACTGTTATCAGAAGGTATGACCCAGATTTAGGGTTCCTC  200

seq1  CTCAAATGATTCAATTAAGAATATCCCTCACGTGCTCAGATGCTTGGGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAATGATTCAATTAAGAATATCCCTCACGTGCTCAGATGCTTGGGTC  250

seq1  TTAACTGATTTAAATGTAGCCAATCAAGTTGACAATAAAAATTAGCCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTGATTTAAATGTAGCCAATCAAGTTGACAATAAAAATTAGCCATT  300

seq1  AGCTATAACAGTGTGTGTGTGTATGTGTGTGTGTCTAAAAACAATAATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATAACAGTGTGTGTGTGTATGTGTGTGTGTCTAAAAACAATAATTA  350

seq1  AAGAAGAATAGGTGATGAATTTGAAAGACTATCAGGGGCATAGGGCAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGAATAGGTGATGAATTTGAAAGACTATCAGGGGCATAGGGCAGTA  400

seq1  AAAAAAGAGAGAGATTGTTACTTGTTTGTGTGTTTTCAGGGCTGACCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGAGAGAGATTGTTACTTGTTTGTGTGTTTTCAGGGCTGACCATT  450

seq1  TACTATTGTGTAGCTAATTGTGTTCTTTCCTCAGTAAGACTATTTCTCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATTGTGTAGCTAATTGTGTTCTTTCCTCAGTAAGACTATTTCTCCC  500

seq1  ACTCCCCTCATTTCTCAGTTGCCTGTAGTTCTTTGTATAGGGTTGAAACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCCTCATTTCTCAGTTGCCTGTAGTTCTTTGTATAGGGTTGAAACC  550

seq1  TCACGATCCTTGATCCTTCCCTTGTCTACCCTGCCATGTCTACTATTATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACGATCCTTGATCCTTCCCTTGTCTACCCTGCCATGTCTACTATTATT  600

seq1  AATCTTGTTCCACTGACATTAGGCAGTCATACTGGTGAGATTTTATGTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTGTTCCACTGACATTAGGCAGTCATACTGGTGAGATTTTATGTGT  650

seq1  GTAGCCTCTGACATTGTTAGGAGACACAGTGTCACAGAAAAGTGCCTGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCCTCTGACATTGTTAGGAGACACAGTGTCACAGAAAAGTGCCTGGT  700

seq1  CCTCTGGCTCTTATTCTGCCCTCTTTTCTGCAATAGTCCCTGAGCCCCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGGCTCTTATTCTGCCCTCTTTTCTGCAATAGTCCCTGAGCCCCAG  750

seq1  GTATGGGAGATGTGGGCGTGCATTTTGATTGGTTGGAGTTCTGTAGTGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGGGAGATGTGGGCGTGCATTTTGATTGGTTGGAGTTCTGTAGTGGC  800

seq1  CTCCATGTTTCAAAGAGAAG-TTTCCTTGATGAGAATTGA-GGACTACA-  847
      |||||||||||||||||||| ||||||||||||||||||| |||||||| 
seq2  CTCCATGTTTCAAAGAGAAGTTTTCCTTGATGAGAATTGAGGGACTACAT  850

seq1  TTTACCTGTGAAAAT--AAGGACAAATA-TTCAGAATATAGTTAAGGA-T  893
      |||||||||| ||||  ||||||||||| ||||||||||||||||||| |
seq2  TTTACCTGTGGAAATTAAAGGACAAATATTTCAGAATATAGTTAAGGATT  900

seq1  TATGCTAGTTTAA  906
      |||||||||||||
seq2  TATGCTAGTTTAA  913