BAC Information

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BAC

Clone NameB6Ng01-214O01
ChromosomeX (Build37)
Map Location 38,066,215 - 38,067,288
singlet/doubletsinglet
Overlap genenone
Upstream geneEG636756, EG636766, EG245391, LOC100039769
Downstream geneLOC385344, Gria3, LOC100039802
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-214O01.bB6Ng01-214O01.g
ACCGA032007GA032008
length1,073748
definitionB6Ng01-214O01.b B6Ng01-214O01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatgaagaaatgactgaataatgtcagaaaaaaaaatacaaatg
aacatttgattaaaacagcaatggtaaaagataaaagcattggggaaaat
tctagctgaaataaagttggaatgaaaaactcaacatactaattagaaaa
ctaagggtaaagtattaaaagtagagcaagccaagaagaagtagattatc
agcacttgaagatagtgtgtattatatatcatatattgtataggatctat
atgaaatatttaaagaaatagtgaatataatttttacaacaccacgggaa
atgtgagacagcatcaaaagattaaatcttccaattatatgcagagagaa
gggagaatgacaggtcaatgacatatacaagttattcaacaaaatcatag
gacaaatcttgcatgaagtaaggaaagacatgtccagtctgatacatgca
taagcacacacatgcacatgcatgaatacacacacacacacacacacacc
tccaattagacaagaccaaaaccagaaatatcccatggcatatcataatc
aagacatcaaatattcataacaaaaatattgttgaaagctgcacaaggaa
aaaaaccttatagatagaagttgagttgtgagaactacaatgatttttgg
atataaggataaggatttagaacgcagtcaggaaaggtactggtttagaa
agtggcaatagtaagtactatgctgtcctttaggacccatggtctcacta
cctccatgtaggtggctagttttaaaataataggcatattttttctcctg
ttaagtagctcttcattgcaattaaacaaatattgatttccatcaaaata
taactaacattattgctgttttaggcatatcttgccttgtctcttaaaaa
tgttttaacttgagttagcctgaatgtaagtctccatatgtacttgctgg
taaccatgtcagacagaatagtactaggatctaaaactataataaatttt
taggccgagtacttcttggtttgtgcagaaatatttttctttcttctgac
ataatatttagatgacaaaaccc

gaattcttggcctccagtttgatggtgttaaatctttgaagacattgttt
tcaggggtgattatggtaccttacagatgatgtaagttccctcttctagg
gagagtgggatgttataatgagagcacacacagaccatgaaatgctctgg
ctcttttttttttttttttttttttttttttttttttttcattttttatt
aggtatttagctcatttacatttccaatgctataccaaaagtccccctta
cccacccacccccactcccctacccacccactccccccctttggccctgg
cgttcccctgtaccggggcacacaaagtctgcgtgtccaatgggcctctc
tttccagtgatggccaactaggccatcttttgatacatatgcagctagag
tcaaaagctcaggggtactggttagttcataatgttgttccacctatagg
gttgaaaatccctttagctccttgggtactttctctagctcctccattgg
gagccctgtgatccatccattagctgactgtgagcatccacttctgtgtt
tgctaggccccggcatagtctcacaagagacagctacatctgggtccttt
cgataaaatcttgctagtaaatgcaatggtgtcagcgtttggatgctgat
tatgggggtggatccctggatatggcagtctctacatggtccatcctttc
atctcagctccaaactttgtttctgtaactccttccatgggtgttttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_38066215_38067288
seq2: B6Ng01-214O01.b_52_1124

seq1  GAATTCCATGAAGAAATGACTGAATAATGTCAGAAAAAAAAATACAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGAAGAAATGACTGAATAATGTCAGAAAAAAAAATACAAATG  50

seq1  AACATTTGATTAAAACAGCAATGGTAAAAGATAAAAGCATTGGGGAAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTGATTAAAACAGCAATGGTAAAAGATAAAAGCATTGGGGAAAAT  100

seq1  TCTAGCTGAAATAAAGTTGGAATGAAAAACTCAACATACTAATTAGAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGCTGAAATAAAGTTGGAATGAAAAACTCAACATACTAATTAGAAAA  150

seq1  CTAAGGGTAAAGTATTAAAAGTAGAGCAAGCCAAGAAGAAGTAGATTATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGGTAAAGTATTAAAAGTAGAGCAAGCCAAGAAGAAGTAGATTATC  200

seq1  AGCACTTGAAGATAGTGTGTATTATATATCATATATTGTATAGGATCTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTTGAAGATAGTGTGTATTATATATCATATATTGTATAGGATCTAT  250

seq1  ATGAAATATTTAAAGAAATAGTGAATATAATTTTTACAACACCACGGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATATTTAAAGAAATAGTGAATATAATTTTTACAACACCACGGGAA  300

seq1  ATGTGAGACAGCATCAAAAGATTAAATCTTCCAATTATATGCAGAGAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAGACAGCATCAAAAGATTAAATCTTCCAATTATATGCAGAGAGAA  350

seq1  GGGAGAATGACAGGTCAATGACATATACAAGTTATTCAACAAAATCATAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAATGACAGGTCAATGACATATACAAGTTATTCAACAAAATCATAG  400

seq1  GACAAATCTTGCATGAAGTAAGGAAAGACATGTCCAGTCTGATACATGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAATCTTGCATGAAGTAAGGAAAGACATGTCCAGTCTGATACATGCA  450

seq1  TAAGCACACACATGCACATGCATGAATACACACACACACACACACACACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCACACACATGCACATGCATGAATACACACACACACACACACACACC  500

seq1  TCCAATTAGACAAGACCAAAACCAGAAATATCCCATGGCATATCATAATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATTAGACAAGACCAAAACCAGAAATATCCCATGGCATATCATAATC  550

seq1  AAGACATCAAATATTCATAACAAAAATATTGTTGAAAGCTGCACAAGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACATCAAATATTCATAACAAAAATATTGTTGAAAGCTGCACAAGGAA  600

seq1  AAAAACCTTATAGATAGAAGTTGAGTTGTGAGAACTACAATGATTTTTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACCTTATAGATAGAAGTTGAGTTGTGAGAACTACAATGATTTTTGG  650

seq1  ATATAAGGATAAGGATTTAGAACGCAGTCAGGAAAGGTACTGGTTTAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAGGATAAGGATTTAGAACGCAGTCAGGAAAGGTACTGGTTTAGAA  700

seq1  AGTGGCAATAGTAAGTACTATGCTGTCCTTTAGGACCCATGGTCTCACTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCAATAGTAAGTACTATGCTGTCCTTTAGGACCCATGGTCTCACTA  750

seq1  CCTCCATGTAGGTGGCTAGTTTTAAAATAATAGGCATATTTTTTCTCCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCATGTAGGTGGCTAGTTTTAAAATAATAGGCATATTTTTTCTCCTG  800

seq1  TTAAGTAGCTCTTCATTGCAATTAAACAAATATTGATTTCCATCAAAATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTAGCTCTTCATTGCAATTAAACAAATATTGATTTCCATCAAAATA  850

seq1  TAACTAACATTATTGCTGTTTTAGGCATATCTTGCCTTGTCTCTTAAAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTAACATTATTGCTGTTTTAGGCATATCTTGCCTTGTCTCTTAAAAA  900

seq1  TGTTTTAACTTGAGTTAGCCTGAATGTAAGTCTCCATATGTACTTGCTGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTAACTTGAGTTAGCCTGAATGTAAGTCTCCATATGTACTTGCTGG  950

seq1  TAACCATGTCAGACAGAATAGTACTAGGATCTAAAAACTATAATAAATTT  1000
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TAACCATGTCAGACAGAATAGTACTAGGATCT-AAAACTATAATAAATTT  999

seq1  TTAGGCCGAGTTACCTTCCTTGGTTTTGTGCAGAAATA--TTTCTTTC-T  1047
      |||||||||| |||  | ||||| ||||||||||||||  |||||||| |
seq2  TTAGGCCGAG-TAC--TTCTTGG-TTTGTGCAGAAATATTTTTCTTTCTT  1045

seq1  CTGACAT-ATATTAGAATGACAAAACCC  1074
      ||||||| |||||   ||||||||||||
seq2  CTGACATAATATTTAGATGACAAAACCC  1073


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