BAC Information

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BAC

Clone NameB6Ng01-215B20
ChromosomeX (Build37)
Map Location 88,822,760 - 88,823,501
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC629471, LOC100041815, Gm44, LOC670074, LOC667972, LOC667976, Mageb2, EG278167, EG667988, EG667993, EG385489, 1700084M14Rik
Downstream geneEG236891, LOC629542, Mageb5, LOC673766, LOC633484, LOC674396, EG278087, Mageb1, EG236892, EG236893, Mageb18, EG436259, EG668061, EG546347
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-215B20.bB6Ng01-215B20.g
ACCGA032176GA032177
length1,112982
definitionB6Ng01-215B20.b B6Ng01-215B20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatccagcaatgatgggaacaggttcagagtaccatagataaaca
ttattaggaagagctcaaggactctttttagagtatgagaaagaaggatg
ggaggaaacagtggagtcagggacaccaagtgatcaaggtccacagaatc
aaattactgggacttatgcgagctcattgagaccagtgagtctttaggaa
agtgagcttggtctgatgaatatatgttatggctgagtagcttgatgtct
tgtgggactaacagtgggagtttggggctatctctgactcctttgtctcc
ctctgtgaccattttcctcctactggtttgcctcaatcaatcttgatatg
aaggtttgtgaagtggaaatttccggggatttttgagactcagttgtgtc
atatcatgtttttctgaaaacggtcttatgagaagatatatttgctgagg
cagacacatgtaagtatgttttgctgagaacatacacatggttttcagga
agtagcctgaaaaggggacatgtggtatatttcatgagaaaatacctgat
gtttggaaagggtataaatataacctaacaaacagtagatgaatctgtgt
ggtattggttcaccttgccattctttactgatcatcatttatcatgactt
cataaagagaagaaacacaccaaagaacttctggtgctgttctggtggct
cttggtgcttctgtggccttgggcctattggcagagcctcatagtttctt
ctggatcgaagtgttgttgcacatttgtgaatggtgtttgccagtgggta
gggctactgttgctgattcctgtgaaatgaactgctgatatcctgaaaag
acagattggattcaccaaaagtactattttcttaacaggtcccatcttcc
tttgcccttttaatcttccgttccagtacctctgctgaatgatgggccta
gaagaataggtaaaggatttaagtacatttattaaagtaagtttgtgctt
agtcttattgtaactggtaatgcagtattggatgatatctctgcatggct
tactttcactgccaggagcatggtgggaataatcttgtgtgaaaagcgag
gatgcagagaga
gaattcagtgatctgcttgcctcagtcttctaggataaaaggcatgtatt
accttccctgggcgtaagtttttcatagccactatgcctcaagatctctg
tgtcaaaatctgggtcagaagcctgtgtcttccagctttaagatctgtat
cacaggtgtgcccttcatttctggattttagttcattacagatgtagtca
agttgacaactaggaatagccatcacgccctccatatctgatcctgcccc
cctcccaccaaggttactccctcacactgccacctgtgattatttggttg
tttctcctaagtgagattgaagcattctcacttgggccttccttcttgct
tgactttttatggtctgtgggggtgtgtcatgggtattctgtacttttga
gataatatccacttaatagtgagtacatacttggatgtacttttgggtct
gtattacctcactctggatgatactttctagttccatccatttgtctggg
aaagtcatgatattcttgttttttaatagcaaagtagtattccattgtgt
aaatgaaccacattttctgtacccattcttcagttgagggacgtctgtgt
tgcttctagtttctagctattgtgaatacagctgctatgaacctggtgga
gcatgtttccctggagtaaggtggagcatcttctgggtatatgcccagga
gaggtatagttgggtcttcaggtagaactatttccaattttctgtccaat
taaaagactattttatcttagatataattgaacataactattactattta
gtaatttataatgtacaagggaccctaacactcagtccaccatgtttgtt
aataaaacggaaccttctttaatatattctttacttaaaagactttataa
ctctacatctggctatgtctttggctttagagtgaattgccatctgaaaa
ttattccactgaaaactgtcctctcaaagtaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_88822760_88823501
seq2: B6Ng01-215B20.g_67_808

seq1  GAATTCAGTGATCTGCTTGCCTCAGTCTTCTAGGATAAAAGGCATGTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGATCTGCTTGCCTCAGTCTTCTAGGATAAAAGGCATGTATT  50

seq1  ACCTTCCCTGGGCGTAAGTTTTTCATAGCCACTATGCCTCAAGATCTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCCCTGGGCGTAAGTTTTTCATAGCCACTATGCCTCAAGATCTCTG  100

seq1  TGTCAAAATCTGGGTCAGAAGCCTGTGTCTTCCAGCTTTAAGATCTGTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAAAATCTGGGTCAGAAGCCTGTGTCTTCCAGCTTTAAGATCTGTAT  150

seq1  CACAGGTGTGCCCTTCATTTCTGGATTTTAGTTCATTACAGATGTAGTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGTGTGCCCTTCATTTCTGGATTTTAGTTCATTACAGATGTAGTCA  200

seq1  AGTTGACAACTAGGAATAGCCATCACGCCCTCCATATCTGATCCTGCCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGACAACTAGGAATAGCCATCACGCCCTCCATATCTGATCCTGCCCC  250

seq1  CCTCCCACCAAGGTTACTCCCTCACACTGCCACCTGTGATTATTTGGTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCACCAAGGTTACTCCCTCACACTGCCACCTGTGATTATTTGGTTG  300

seq1  TTTCTCCTAAGTGAGATTGAAGCATTCTCACTTGGGCCTTCCTTCTTGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCCTAAGTGAGATTGAAGCATTCTCACTTGGGCCTTCCTTCTTGCT  350

seq1  TGACTTTTTATGGTCTGTGGGGGTGTGTCATGGGTATTCTGTACTTTTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTTTTATGGTCTGTGGGGGTGTGTCATGGGTATTCTGTACTTTTGA  400

seq1  GATAATATCCACTTAATAGTGAGTACATACTTGGATGTACTTTTGGGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATATCCACTTAATAGTGAGTACATACTTGGATGTACTTTTGGGTCT  450

seq1  GTATTACCTCACTCTGGATGATACTTTCTAGTTCCATCCATTTGTCTGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTACCTCACTCTGGATGATACTTTCTAGTTCCATCCATTTGTCTGGG  500

seq1  AAAGTCATGATATTCTTGTTTTTTAATAGCAAAGTAGTATTCCATTGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCATGATATTCTTGTTTTTTAATAGCAAAGTAGTATTCCATTGTGT  550

seq1  AAATGAACCACATTTTCTGTACCCATTCTTCAGTTGAGGGACGTCTGTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAACCACATTTTCTGTACCCATTCTTCAGTTGAGGGACGTCTGTGT  600

seq1  TGCTTCTAGTTTCTAGCTATTGTGAATACAGCTGCTATGAACCTGGTGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCTAGTTTCTAGCTATTGTGAATACAGCTGCTATGAACCTGGTGGA  650

seq1  GCATGTTTCCCTGGAGTAAGGTGGAGCATCTTCTGGGTATATGCCCAGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTTTCCCTGGAGTAAGGTGGAGCATCTTCTGGGTATATGCCCAGGA  700

seq1  GAGGTATAGTTGGGTCTTCAGGTAGAACTATTTCCAATTTTC  742
      ||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTATAGTTGGGTCTTCAGGTAGAACTATTTCCAATTTTC  742