MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-216B15
Chromosome	X (Build37)
Map Location	17,437,866 - 17,438,929
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Ndph, LOC100043063, Efhc2, Fundc1, EG278181, EG668994
Downstream gene	EG436196, EG331391, Dusp21, LOC100043951, Utx, LOC100043952, 4930578C19Rik, LOC100043098, EG628855
Link	Open Mouse BAC browser

Click to get alignment info.

name	Ndph (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17986 MGI:102570
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043063 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043063
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Efhc2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74405 MGI:1921655
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fundc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72018 MGI:1919268
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG278181 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:278181 MGI:3643718
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 12 Proteins

name	EG668994 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668994 MGI:3645165
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 15 Proteins pseudo : _no_value

name	EG436196 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:436196 MGI:3646107
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 12 Proteins

name	EG331391 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:331391 MGI:3643621
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 12 Proteins

name	Dusp21 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73547 MGI:1920797
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043951 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043951
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Utx (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22289 MGI:1095419
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043952 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043952
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	4930578C19Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75905 MGI:1923155
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043098 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043098
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 3 ESTs, 1 Protein

name	EG628855 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:628855 MGI:3647357
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins

name	Ndph (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:61098076 GeneID:17986 MGI:102570
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Norrie disease homolog transcript_id : NM_010883.2

name	LOC100043063 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270999 GeneID:100043063
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : hypothetical protein LOC100043063 transcript_id : XM_001477606.1

name	Efhc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142348726 GeneID:74405 MGI:1921655
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : EF-hand domain (C-terminal) containing 2 transcript_id : NM_028916.2

name	Fundc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142381937 GeneID:72018 MGI:1919268
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : FUN14 domain containing 1 transcript_id : NM_028058.2

name	EG278181 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149271052 GeneID:278181 MGI:3643718
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 12 Proteins product : predicted gene, EG278181 transcript_id : XM_205276.2

name	EG436196 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149271054 GeneID:436196 MGI:3646107
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 12 Proteins product : predicted gene, EG436196 transcript_id : XM_488332.2

name	EG331391 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149271056 GeneID:331391 MGI:3643621
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 12 Proteins product : predicted gene, EG331391 transcript_id : XM_285437.3

name	Dusp21 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:58037324 GeneID:73547 MGI:1920797
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dual specificity phosphatase 21 transcript_id : NM_028568.1

name	Utx (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33859491 GeneID:22289 MGI:1095419
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ubiquitously transcribed tetratricopeptide repeat gene, X chromosome transcript_id : NM_009483.1

name	4930578C19Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142347804 GeneID:75905 MGI:1923155
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930578C19 gene transcript_id : NM_175228.3

name	LOC100043098 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271001 GeneID:100043098
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 3 ESTs, 1 Protein product : hypothetical protein LOC100043098 transcript_id : XM_001477741.1

name	EG628855 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149271058 GeneID:628855 MGI:3647357
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins product : predicted gene, EG628855 transcript_id : XM_893647.3

name	Ndph (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754808 CCDS:CCDS30034.1 GeneID:17986 MGI:102570
definition	GO_process : GO:0001890 - placenta development [Evidence IMP] codon_start : 1 product : Norrie disease homolog protein_id : NP_035013.1

name	LOC100043063 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271000 GeneID:100043063
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477656.1

name	Efhc2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037365 GeneID:74405 MGI:1921655
definition	codon_start : 1 exception : mismatches in translation product : EF-hand domain (C-terminal) containing 2 protein_id : NP_083192.1

name	Fundc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312526 CCDS:CCDS30035.1 GeneID:72018 MGI:1919268
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : FUN14 domain containing 1 protein_id : NP_082334.1

name	EG278181 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149271053 GeneID:278181 MGI:3643718
definition	codon_start : 1 product : similar to KIAA0026 protein_id : XP_205276.2

name	EG436196 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149271055 GeneID:436196 MGI:3646107
definition	codon_start : 1 product : similar to KIAA0026 protein_id : XP_488332.2

name	EG331391 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149271057 GeneID:331391 MGI:3643621
definition	codon_start : 1 product : similar to KIAA0026 protein_id : XP_285437.3

name	Dusp21 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037325 CCDS:CCDS30036.1 GeneID:73547 MGI:1920797
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008138 - protein tyrosine/serine/threonine phosphatase activity [Evidence IEA] GO_process : GO:0006470 - protein amino acid dephosphorylation [Evidence IEA] codon_start : 1 note : novel dual specificity phosphatase, catalytic domain containing protein product : dual specificity phosphatase 21 protein_id : NP_082844.1

name	Utx (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859492 CCDS:CCDS30037.1 GeneID:22289 MGI:1095419
definition	GO_component : GO:0005742 - mitochondrial outer membrane translocase complex [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA] GO_process : GO:0006605 - protein targeting [Evidence IEA] codon_start : 1 product : ubiquitously transcribed tetratricopeptide repeat gene, X chromosome protein_id : NP_033509.1

name	4930578C19Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30424860 CCDS:CCDS30038.1 GeneID:75905 MGI:1923155
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA] codon_start : 1 product : hypothetical protein LOC75905 protein_id : NP_780437.1

name	LOC100043098 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271002 GeneID:100043098
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477791.1

name	EG628855 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149271059 GeneID:628855 MGI:3647357
definition	codon_start : 1 product : hypothetical protein protein_id : XP_898740.3

name	LOC100043951 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043951
definition	number : 1 pseudo : _no_value

name	LOC100043952 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043952
definition	number : 2 pseudo : _no_value

name	LOC100043952 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043952
definition	number : 1 pseudo : _no_value

name	EG668994 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94407022 GeneID:668994 MGI:3645165
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 15 Proteins product : predicted gene, EG668994 pseudo : _no_value transcript_id : XR_002283.1

clone name	MSMg01-439L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332L07
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-524M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-188G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-093E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-212A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-172B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272E08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-326J21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-151H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474A05
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-127M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-162N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348A08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-387O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-048J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387I19
singlet/doublet	singlet
plural/unique	plural

clone name	B6Ng01-097B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021A19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172N03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175E08
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-216B15.b	B6Ng01-216B15.g
ACC	GA032877	GA032878
length	1,199	1,071
definition	B6Ng01-216B15.b	B6Ng01-216B15.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctcaacctgcttccttttccactggtcagttacatgatctcacct tatcttgtgcctgcccttacctgcatatagacaacaatccacatttcccc ctttttgtccagttaaaaggctctttcctctcaaatgtaaattgaacaaa actattaccattttgtaaattataaagtataagatacacctaacatccag tccactatctttgataattaaatagaatactctgttatctatcctaactt taaaaaggcttataaatcactgtgtgttatgtccttgttttagcttatat gctatctgaaaattatcttctcaaatatattctctcaatgctaaacagcc cgggttggctatgagactataactagtctttaatactgtcagaaatctgg gaatgaccaatattatctgaaaaattaggaagcctaacacagcttgtagt aaggaggcatgggaggcatgggaggcattgttcctacctatacagcccct gtatgtgaggaagttggagcatcagtcttcagccttctggcccaggttca tctgacagatctttgaaatgcagaattttgaaggactgattactctggct tggcagagattatcagttgactattctgtatagtgtgtcctttttctgaa cagtattttgtctgtagatgaaataggcaatttctgcccagtggctacct agccacaatggagataaagatgctcaatttcttctttgaatccacaaaag gggagctgctaggagcagatatgtctcaacaacaaaagattaaataacat taaatgtcacattttgtggatttctgacatttttgaaaaccatctatcca tacaaagtaatctgggactgttgtccattagctactctcagctacttcta aataaatatcttgcaagtaccctagcaattaactctgagccaataatttg ctatttgggcctttacctcaaaggcttaaacatcttagatcagtttgcat gacatttattagaagaactgggtccagcctttgtattctaaatgtgtttg tattagcacatgccatataggatagatatttgattccatttatacattag gagtttatcaatgaagcctaattgattcttaaattatctgtactagtaga attatggctccactagtactattggaaagaattctcacaaagtgagtat	gaattcatatgagacaaagtagtagaagaagcagacgtgtgtttagagaa aagaagaaagcaagaatacatttttggcctagggagattgcttacttgtt acccaaacaagagggatagagcttagatccccagtggacatgtaaatcca gggggtggtggtggggcatggtaacaaactataatcccagcttcagatgg cagaattagggtattggggtttcaaaagactggcgcaattctgtaccctc actaactttctattgcggtttgcgatatgagctctcaatgttcctgctat tgagccttcactcctctatcatggactataaccctcttaaaccataagcc caaataaattcgctcatttataaattgccttggtcgtggtgttttatcac aggaataggaaagtaattaagacacgaggaaaggttttgttttgttttgt tttgttttgttttgttttgttttgtttcaactatagtttcacatcatagt ccatcatccagagaagtcatggcaagaacacaaggtaagaacctagaagt aagaactaaatcagaagtcatataggaacactagcttgctaactatagct tccccagttactttcttatgtcatccagaaccaccttgccaatagtggca ccacacacagtgatctgggcccttccacatcaatcatcaatcaagaacat gtactattgagtcacctaaaggcaatctggagaaaggcatctttttcaat tgaggtttctctgcctagataattctagttcatatcaagctgacaaaaaa ctgaccagggcatccaccaaaaactaaggttgagaacctcttcctatctc tgaggcttcagttcagcttggtccttacttttgatacaacatattcaact ggcatctgcctatcctactgtcacctatctggacctctttgttcccattg ccctgcacccaatcctaccctttcacttctgcagttgtcctcaactctcc agtttttctttcaccactgtgatttccactgtagtctgattcaacaagaa gcagaatttttccgctctgag
quality values	Open. Hide. 58 31 29 31 62 54 47 31 32 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 26 19 59 62 49 62 51 39 28 28 27 28 29 28 24 29 43 29 29 32 32 49 51 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 54 54 59 62 56 59 51 45 33 54 40 56 59 56 56 62 62 59 62 62 62 62 62 62 62 62 62 62 42 42 54 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 54 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 59 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 43 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 48 54 62 62 38 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 54 54 62 62 62 54 62 62 42 54 62 62 62 62 62 62 62 62 52 62 62 62 62 54 58 58 58 58 58 58 54 52 58 58 58 58 58 58 58 54 37 58 54 52 53 58 54 58 58 52 58 58 58 58 58 46 42 52 54 54 58 58 58 58 58 58 58 58 54 58 34 58 42 58 54 42 58 58 54 58 58 58 47 58 58 46 58 54 45 41 58 52 58 54 58 58 51 51 50 58 50 58 51 52 52 50 49 19 42 40 54 46 52 53 49 49 54 58 53 46 42 41 53 41 49 58 53 58 50 51 53 51 53 53 58 51 51 41 51 51 37 58 58 58 53 58 51 50 39 40 49 31 42 33 42 38 58 58 58 58 50 53 52 51 38 29 30 42 31 39 54 58 39 42 51 50 58 52 42 53 39 58 58 53 47 33 19 58 50 37 52 22 47 58 35 52 26 31 54 49 45 31 53 49 37 47 18 54 42 52 51 39 39 26 17 27 54 47 39 53 32 52 37 49 39 32 42 54 54 46 52 43 53 53 25 54 46 22 31 44 42 35 53 32 53 36 54 54 51 25 54 54 49 51 24 38 34 45 33 33 34 9 44 26 24 45 31 31 46 28 40 52 51 34 47 45 53 32 26 47 26 32 40 27 49 52 33 28 31 28 34 30 53 34 31 18 32 32 35 32 29 32 51 32 31 51 32 31 31 31 31 46 51 51 28 31 29 51 31 26 18 47 18 26 31 30 31 22 14 11 51 51 51 45 42 31 46 46 33 14 41 32 38 31 29 31 32 23 35 23 27 20 31 28 47 11 22 25 16 33 22 36 29 18 46 17 31 34 27 37 22 11 34 27 36 31 26 34 37 41 24 43 34 35 34 26 31 32 38 26 21 37 31 13 22 18 25 25 28 31 46 28 26 48 48 39 13 5 10 37 33 17 26 18 26 16 29 12 12 26 44 33 26 29 17 31 26 31 18 38 19 24 31 32 22 7 16 37 11 15 29 14 24 22 10 38 33 48 31 33 23 22 30 22 48 32 14 48 12 32 13 34 47 6 10 29 22 27 21 13 27 18 11 17 17 26 20 20 37 17 17 14 22 19 11 8 9 6 8 8 22 32 12 10 28 14 24 15 8 10 23 28 17 24 28 38 27 6 7 12 16 10 21 8 10 28 26 17 18 22 34 28 11 13 11 27 10 10 19 9 32 10 20 6 7 5 24 22 11 3 40 15 5 4 4 7 19 20 5 3 3 4 5 19 6 10 4 7 8 8 11 28 7 5 11 15 6 10 24 6 5 15 3 5 2 16 4 9 8 13 11 22 14 8 5 17 16 8 3 14 4 7 7 25 18 17 6 6 18 5 5 5 1 3 25 13 4 3 7 2 6 5 8 22 3 1 2 17 18 8 9 3 3 7 3 4 5 7 5 8 25 25 9 7 5 9 2 3 6 13 5 7 19 11 15 5 2 7 4 5 9 3 3 8 8 18 15 6 18 7 9 8 10 22 5 3 2 5 7 7 9 16 7 4 1 4 2 5 5 4 8 7 6 10 4 3 3 18 8 4 6 2 3 11 8 2 1 3 4	Open. Hide. 62 38 43 42 62 47 47 62 62 54 50 38 15 23 34 18 22 27 21 27 28 25 28 28 31 59 62 62 62 62 59 62 62 56 62 49 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 59 62 62 59 62 62 56 51 51 49 46 32 42 46 54 59 59 56 54 62 62 62 62 62 59 62 62 59 62 49 62 62 59 59 59 59 62 62 59 59 59 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 59 54 54 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 56 62 56 62 62 56 62 56 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 47 62 62 62 62 62 62 62 47 42 62 62 54 54 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 41 36 62 62 48 58 58 41 45 58 47 43 52 58 52 58 58 46 58 58 58 54 58 58 45 54 58 54 58 58 58 52 58 58 58 58 58 58 54 58 54 58 58 47 58 54 47 49 58 58 52 58 54 58 54 58 58 41 54 52 58 58 58 54 51 50 58 54 52 54 49 54 54 54 54 46 51 58 58 58 52 46 51 45 47 50 49 58 58 54 50 48 42 47 45 39 49 53 43 41 47 51 51 51 45 58 49 37 49 58 42 46 50 49 58 58 53 48 41 50 49 58 54 41 46 50 46 54 41 37 58 51 37 51 41 39 49 51 52 51 42 25 15 43 43 50 37 53 58 54 43 27 48 48 29 50 41 49 50 51 41 50 23 39 25 23 50 41 53 58 42 53 58 51 33 40 46 53 34 49 39 53 39 50 50 53 53 32 32 46 49 39 51 39 37 49 53 53 35 42 32 49 51 51 31 53 45 35 46 52 51 50 41 33 45 32 32 51 39 32 54 33 45 54 33 28 40 37 35 45 49 54 38 24 52 54 46 37 51 26 32 45 42 34 54 54 54 24 19 6 54 37 52 42 40 39 51 24 54 30 30 26 53 37 47 29 46 30 31 27 53 33 34 19 18 25 34 34 33 33 53 35 34 40 33 30 32 28 25 24 32 28 31 39 33 20 33 53 53 52 40 28 31 33 34 31 20 32 25 9 7 21 23 30 23 21 45 31 30 22 20 45 51 51 31 23 26 16 30 27 34 17 23 28 45 14 33 23 33 33 26 32 16 23 27 30 31 14 21 31 30 32 30 28 44 8 42 16 38 26 30 18 14 12 31 30 31 23 46 15 18 33 19 9 32 32 24 31 33 17 25 41 41 25 19 34 22 21 10 9 31 27 24 19 29 24 18 32 31 34 21 16 20 14 46 18 12 15 12 25 26 27 19 5 17 18 19 19 30 30 13 10 13 10 15 29 25 25 27 36 31 31 33 15 31 10 31 15 12 24 36 9 26 24 34 15 38 19 20 12 5 11 19 11 7 6 9 15 21 26 41 35 22 26 32 32 31 22 9 8 43 11 34 37 16 8 9 11 31 24 26 16 30 22 13 13 32 13 11 13 37 27 19 30 25 32 15 18 10 14 8 21 27 23 11 31 21 4 6 21 11 36 26 12 18 6 7 8 32 24 34 10 32 8 5 12 23 5 13 10 7 13 8 14 8 5 4 6 5 13 7 3 7 27 7 5 3 5 13 20 10 23 7 28 19 13 20 21 12 27 40 11 20 22 26 6 9 12 21 8 16 16 12

Alignment Information

BAC End 1

BAC End 2

seq1: chrX_17437866_17438929
seq2: B6Ng01-216B15.g_69_1139

seq1  GAATTCATATGAGACAAAGTAGTAGAAGAAGCAGACGTGTGTTTAGAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATATGAGACAAAGTAGTAGAAGAAGCAGACGTGTGTTTAGAGAA  50

seq1  AAGAAGAAAGCAAGAATACATTTTTGGCCTAGGGAGATTGCTTACTTGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGAAAGCAAGAATACATTTTTGGCCTAGGGAGATTGCTTACTTGTT  100

seq1  ACCCAAACAAGAGGGATAGAGCTTAGATCCCCAGTGGACATGTAAATCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAAACAAGAGGGATAGAGCTTAGATCCCCAGTGGACATGTAAATCCA  150

seq1  GGGGGTGGTGGTGGGGCATGGTAACAAACTATAATCCCAGCTTCAGATGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGTGGTGGTGGGGCATGGTAACAAACTATAATCCCAGCTTCAGATGG  200

seq1  CAGAATTAGGGTATTGGGGTTTCAAAAGACTGGCGCAATTCTGTACCCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATTAGGGTATTGGGGTTTCAAAAGACTGGCGCAATTCTGTACCCTC  250

seq1  ACTAACTTTCTATTGCGGTTTGCGATATGAGCTCTCAATGTTCCTGCTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAACTTTCTATTGCGGTTTGCGATATGAGCTCTCAATGTTCCTGCTAT  300

seq1  TGAGCCTTCACTCCTCTATCATGGACTATAACCCTCTTAAACCATAAGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCTTCACTCCTCTATCATGGACTATAACCCTCTTAAACCATAAGCC  350

seq1  CAAATAAATTCGCTCATTTATAAATTGCCTTGGTCGTGGTGTTTTATCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAAATTCGCTCATTTATAAATTGCCTTGGTCGTGGTGTTTTATCAC  400

seq1  AGGAATAGGAAAGTAATTAAGACACGAGGAAAGGTTTTGTTTTGTTTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATAGGAAAGTAATTAAGACACGAGGAAAGGTTTTGTTTTGTTTTGT  450

seq1  TTTGTTTTGTTTTGTTTTGTTTTGTTTCAACTATAGTTTCACATCATAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTTGTTTTGTTTTGTTTTGTTTCAACTATAGTTTCACATCATAGT  500

seq1  CCATCATCCAGAGAAGTCATGGCAAGAACACAAGGTAAGAACCTAGAAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCATCCAGAGAAGTCATGGCAAGAACACAAGGTAAGAACCTAGAAGT  550

seq1  AAGAACTAAATCAGAAGTCATATAGGAACACTAGCTTGCTAACTATAGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACTAAATCAGAAGTCATATAGGAACACTAGCTTGCTAACTATAGCT  600

seq1  TCCCCAGTTACTTTCTTATGTCATCCAGAACCACCTTGCCAATAGTGGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCAGTTACTTTCTTATGTCATCCAGAACCACCTTGCCAATAGTGGCA  650

seq1  CCACACACAGTGATCTGGGCCCTTCCACATCAATCATCAATCAAGAACAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACACAGTGATCTGGGCCCTTCCACATCAATCATCAATCAAGAACAT  700

seq1  GTACTATTGAGTCACCTAAAGGCAATCTGGAGAAAGGCATCTTTTTCAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTATTGAGTCACCTAAAGGCAATCTGGAGAAAGGCATCTTTTTCAAT  750

seq1  TGAGGTTTCTCTGCCTAGATAATTCTAGTTCATATCAAGCTGACAAAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTTTCTCTGCCTAGATAATTCTAGTTCATATCAAGCTGACAAAAAA  800

seq1  CTGACCAGGGCATCCACCAAAAACTAAGGTTGAGAACCTCTTCCTATCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCAGGGCATCCACCAAAAACTAAGGTTGAGAACCTCTTCCTATCTC  850

seq1  TGAGGCTTCAGTTCAGCTTGGTCCTTACTTTTGATACAACATATTCAACT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCTTCAGTTCAGCTTGGTCCTTACTTTTGATACAACATATTCAACT  900

seq1  GCCATCTGCCTATCCTACTGTTCACCTATCTGGACCTC-TTGTTCCCAT-  948
      | |||||||||||||||||| ||||||||||||||||| |||||||||| 
seq2  GGCATCTGCCTATCCTACTG-TCACCTATCTGGACCTCTTTGTTCCCATT  949

seq1  -GCCTGCACCCAATCCTACCCTTTCACTTCTGCAGTTGTCCTCAACTCTC  997
        ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGCACCCAATCCTACCCTTTCACTTCTGCAGTTGTCCTCAACTCTC  999

seq1  CAGTTTTTCTTTCAACACTGTGATT--CACTGTAGTCTGATTCTACAAG-  1044
      |||||||||||||| ||||||||||  |||||||||||||||| ||||| 
seq2  CAGTTTTTCTTTCACCACTGTGATTTCCACTGTAGTCTGATTCAACAAGA  1049

seq1  AGCAG-ATTTTTCC-CTCTGAG  1064
      ||||| |||||||| |||||||
seq2  AGCAGAATTTTTCCGCTCTGAG  1071

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information