BAC Information

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BAC

Clone NameB6Ng01-217H17
ChromosomeX (Build37)
Map Location 26,681,590 - 26,682,798
singlet/doubletsinglet
Overlap geneEG664861
Upstream geneLOC100039065, LOC100039078, LOC100039003, Slx, LOC100039120, LOC619914, LOC100039039, LOC619991, LOC664844, LOC100042154
Downstream geneLOC664866, LOC100042175, LOC100039194, LOC100039208, EG664877, LOC664881, LOC100039240, LOC100039248, LOC100039073, EG664890, LOC664898, LOC22526
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-217H17.bB6Ng01-217H17.g
ACCGA033877GA033878
length1,189859
definitionB6Ng01-217H17.b B6Ng01-217H17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaggttcattgagaccctgtctcccaaacagtgggatgcaacca
aagaagacacccaatattaatcctttgtctccatatgtatgcacgtgtac
attttttaaagagaaacttcacaaagtggaggtcattgtacttaatcagg
atgatttgagtggaaatgtgaggtacaaaactgatcactgtgaataaagg
acaaaataggaatgtagtagcagaaggagaaaaggtgtaaacagcctgtc
ttaattttttaaatgcaaattaccatggttgtctgccaacataaagaata
caaagagaaatttatattactacttccattgttacttgagattggaacct
agataaaacaaatctaccactaaactttgtccccagacatctttttacac
tttattttgaggcagggtatctttaagtgatcaaaactattcatgatctt
gtgatcattctaactcaaactttataaaagttagttttataggcattaca
ctgacgaccagctaaagtcataaatttaaaataacagttacagttggtga
aactcttgacaatagttgagaaaagtgaagatgtttgacttagtaaagaa
taagtataaggcatccttaagaaaggaaaagaaagtagaagacatggcac
atacaccttaggtgggggctagatacagagatgaggtagtgaaccacctc
ctgggattacttctgctggttagaaaaaggaggccaccatatggtaaaag
cattaacactagctagagttaagcttccagggctaggattttaccaagtt
catgtttacatggtgcatgcctataaacttaagtacttgagaggctaagg
ccagtctctgcagcatggcaaacactttctcataaaaaaaagttttatta
acccacaattggtagtataattgtatttcatgttacttaaaaatataagt
atatttagtcataatagttgttaaaatgttaaatcacttgggaaactatt
ctttacatttcatatggaattatttttgctcacgtaaatattttagtatg
gaaatacattaagtggttgtgtagcctagcatcatgctgcatggcagtaa
aacaaaatgaacagaatgtacagtatgttttcttttacattgtagacata
tcaaagaacacagcatttaactgtcggaaagtgtagtca
gaattctttactaaacccatcagatcctgggcttttttgtttgggagact
attaatgactgcttctatttctttaggtgttatgggagtatttctagggt
ttatctgatcctgaattatatttggtacctgatatctgtctagaaatgtg
tccatttcatccagattttccagttttgttgagtataggtttttgtagta
ggatctgatgattttttggatatcctaagtttctgttgttatgtctccct
tttcatttctggttttgttaattaggatgatgtctcggtttcctttagtg
agtctggctaagggtttacctatcatgttgattttctcaaacaaccagct
cctggtttggttgattctttgtatagttcctttgtttccaattggttgat
ttcattcctgagtttgattgtttcctgccttctattcctcttgtgagaat
ttgcttccttttgttctagagcttttagttgtgctgtcaagctgctcctg
catcctctatcctgtttctttttagaggcattcagagctgtgaattttag
tcttattactgtttccattgtgtaccatatgtctggttatgttgtagctt
cattttcattaaactctaaaaagtctttaattttccttctttattccttt
cctttgaccaagttatcattgagtaggttgtttgtttcaccttccacata
tatgtgggattttctattatttatattattatggaaagatcagcattagt
ctgtggtgatctgataggatgcatgggattatttcaatattttttatatc
tgtttgaggcatgttttgtgactgatatatgggtcagttttggagaagcc
tccatgagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_26681590_26682798
seq2: B6Ng01-217H17.b_51_1239

seq1  GAATTCTAGGTTCATTGAGACCCTGTCTCCCAAACAGTGGGATGCAACCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGGTTCATTGAGACCCTGTCTCCCAAACAGTGGGATGCAACCA  50

seq1  AAGAAGACACCCAATATTAATCCTTTGTCTCCATATGTATGCACGTGTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGACACCCAATATTAATCCTTTGTCTCCATATGTATGCACGTGTAC  100

seq1  ATTTTTTAAAGAGAAACTTCACAAAGTGGAGGTCATTGTACTTAATCAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTAAAGAGAAACTTCACAAAGTGGAGGTCATTGTACTTAATCAGG  150

seq1  ATGATTTGAGTGGAAATGTGAGGTACAAAACTGATCACTGTGAATAAAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTTGAGTGGAAATGTGAGGTACAAAACTGATCACTGTGAATAAAGG  200

seq1  ACAAAATAGGAATGTAGTAGCAGAAGGAGAAAAGGTGTAAACAGCCTGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAATAGGAATGTAGTAGCAGAAGGAGAAAAGGTGTAAACAGCCTGTC  250

seq1  TTAATTTTTTAAATGCAAATTACCATGGTTGTCTGCCAACATAAAGAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTTTTAAATGCAAATTACCATGGTTGTCTGCCAACATAAAGAATA  300

seq1  CAAAGAGAAATTTATATTACTACTTCCATTGTTACTTGAGATTGGAACCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAGAAATTTATATTACTACTTCCATTGTTACTTGAGATTGGAACCT  350

seq1  AGATAAAACAAATCTACCACTAAACTTTGTCCCCAGACATCTTTTTACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAAACAAATCTACCACTAAACTTTGTCCCCAGACATCTTTTTACAC  400

seq1  TTTATTTTGAGGCAGGGTATCTTTAAGTGATCAAAACTATTCATGATCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTGAGGCAGGGTATCTTTAAGTGATCAAAACTATTCATGATCTT  450

seq1  GTGATCATTCTAACTCAAACTTTATAAAAGTTAGTTTTATAGGCATTACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATCATTCTAACTCAAACTTTATAAAAGTTAGTTTTATAGGCATTACA  500

seq1  CTGACGACCAGCTAAAGTCATAAATTTAAAATAACAGTTACAGTTGGTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACGACCAGCTAAAGTCATAAATTTAAAATAACAGTTACAGTTGGTGA  550

seq1  AACTCTTGACAATAGTTGAGAAAAGTGAAGATGTTTGACTTAGTAAAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTTGACAATAGTTGAGAAAAGTGAAGATGTTTGACTTAGTAAAGAA  600

seq1  TAAGTATAAGGCATCCTTAAGAAAGGAAAAGAAAGTAGAAGACATGGCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTATAAGGCATCCTTAAGAAAGGAAAAGAAAGTAGAAGACATGGCAC  650

seq1  ATACACCTTAGGTGGGGGCTAGATACAGAGATGAGGTAGTGAACCACCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACCTTAGGTGGGGGCTAGATACAGAGATGAGGTAGTGAACCACCTC  700

seq1  CTGGGATTACTTCTGCTGGTTAGAAAAAGGAGGCCACCATATGGTAAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGATTACTTCTGCTGGTTAGAAAAAGGAGGCCACCATATGGTAAAAG  750

seq1  CATTAACACTAGCTAGAGTTAAGCTTCCAGGGCTAGGATTTTACCAAGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAACACTAGCTAGAGTTAAGCTTCCAGGGCTAGGATTTTACCAAGTT  800

seq1  CATGTTTACATGGTGCATGCCTATAAACTTAAGTACTTGAGAGGCTAAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTTACATGGTGCATGCCTATAAACTTAAGTACTTGAGAGGCTAAGG  850

seq1  CCAGTCTCTGCAGCATGGCAAACACTTTCTCATAAAAAAAAGTTTTATTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCTCTGCAGCATGGCAAACACTTTCTCATAAAAAAAAGTTTTATTA  900

seq1  ACCCACAATTGGTAGTATAATTGTATTTCATGTTACTTAAAAATATAAGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACAATTGGTAGTATAATTGTATTTCATGTTACTTAAAAATATAAGT  950

seq1  ATATTTAGTCATAATAGTTGTTAAAATGTTAAATCACTTGGAAAACTATT  1000
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  ATATTTAGTCATAATAGTTGTTAAAATGTTAAATCACTTGGGAAACTATT  1000

seq1  CCTTTTACATTTCATATGGAATTATTTTTGCTCACGTAAATATTTTAGTA  1050
      |  |||||||||||||||||||||||||||||||||||||||||||||||
seq2  C--TTTACATTTCATATGGAATTATTTTTGCTCACGTAAATATTTTAGTA  1048

seq1  TTGGAAATACATTAAGTGGTTGGTTGTTAGCCTAGCATTCATGCTGCATG  1100
       |||||||||||||||||||||  || |||||||||| ||||||||||||
seq2  -TGGAAATACATTAAGTGGTTG--TG-TAGCCTAGCA-TCATGCTGCATG  1093

seq1  GCAGTAAAAACAAAAATGAACAGAATTGTTACAGTAATGTTTTCCTTTTA  1150
      |||||||||   ||||||||||||||   |||||| ||||||| ||||||
seq2  GCAGTAAAA--CAAAATGAACAGAAT--GTACAGT-ATGTTTT-CTTTTA  1137

seq1  CATTTGTAGAACAATTATCAAAAAGAACAACAAGCATTAAAACTGTCCGA  1200
      || |||||| |||  ||||  ||||||||   ||||||  ||||||| ||
seq2  CA-TTGTAG-ACA--TATC--AAAGAACA--CAGCATT-TAACTGTCGGA  1178

seq1  A--TGTAGTCA  1209
      |  ||||||||
seq2  AAGTGTAGTCA  1189