BAC Information

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BAC

Clone NameB6Ng01-218O06
ChromosomeX (Build37)
Map Location 143,706,580 - 143,707,706
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666730, EG245663, Htr2c
Downstream geneIl13ra2, V1rb10, Lrch2, LOC100039462, LOC666789, LOC434863, EG623995, EG624023, LOC666184, LOC100039511, LOC666812, LOC100039519, LOC434864, EG624096
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-218O06.bB6Ng01-218O06.g
ACCGA034893GA034894
length1,1961,126
definitionB6Ng01-218O06.b B6Ng01-218O06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactaggcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcttccaaatgcttgacaccattgcatacacttagcaagattttactga
aaggacccagatgtaactgtctctttgtgagactatgccggggcctagca
aacacagaagtgggatgctcacagctagctaatggaatggatcacagggc
ttccaatggtagggagctagagaaagtacccaaggagctaaagggatctt
caccctataggtggaacacattatgaactaaccagtactctggagctctg
gactctagctggcatagtgattctaaagatggccctgatcggccattcac
gggaagagaaaggcccatgggactaggctaacttttgttgtgtcccggtt
cagggtaactcatggctcaatatatcagttcgctctgctactgatc
gaattcctaatttagacaaaatgtacctgacgattccttgagccattgag
agtgatttaagccccacttcaagcatgggggaaaagtgtgagtcgttttg
gtgctgaaggaataattctgaggtttctgtgtcagaaacacaattgggag
gacccattgacagagtgagaatgttgatgtatccacaatctataaaggat
gccatcctttagaggcagaaaggttcacaccatgttggggaaagtagaaa
tgccaaagactcttgtatctgtacaagatcagggtcgagttggagaggag
agaaggcctgaatatttcattatcgaggtttcttgggaacctagaacacg
catatcatgcaggccatgcaacagtgtaatcaatcttcagtatgctagga
ggcacttcccagctagttctcctgataaatcagctggctacttttgaaaa
tggcaaggctttcttgtttctgctggccaacttaatgtatatgtcctggg
tttatgaacttgctggctactcttggctctgagacctcaagcacccgggt
cctgctccttggacagaggtaatgaggtcagaggatcagaataagaagaa
ctcggtgaaccttagatcaagggagtcaatttgtcatggattagatcaga
tctagtaggtaggtccaggtcctcaatgatcagaaatatataatattctc
catgaggtgaaaattatatagcacgttcttctggctacaattgtgagcta
ctcttaatcagaaggggattcttgtcatgcttttagtcacagggacatat
atgatgcttcaatgtgcatctgaggtagctaggagtggaaattgtaagtt
tgatagacggttgatgagaagaaaaagttctaaactcatgttgctcataa
gggacacagaaagagaaaacatgagggcagcttgtagataaaaagaactg
aaaatgccagggtaagagagagtagggtccaggccaccctctgagatgga
ctgccttactggttccatttggcaagctggaaagtctggtgtgtctttgg
cagaagagttaagtcgaaggcaagagtaagtcgtaagccctcctaggagc
atttattattcctgagcttttgtccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_143706580_143707706
seq2: B6Ng01-218O06.g_65_1190 (reverse)

seq1  GGGACAAAAGCTC-GGGATAATAAATGCT-CTAGGA-GGCTTACGACTTA  47
      ||||||||||||| || |||||||||||| |||||| |||||||||||||
seq2  GGGACAAAAGCTCAGGAATAATAAATGCTCCTAGGAGGGCTTACGACTTA  50

seq1  CTCCTTGCTTCCGACTTACTCCTTCTGCCCAAGGACACACCAGACTTTCC  97
      || ||||| | |||||||   |||||| |||| |||||||||||||||||
seq2  CT-CTTGCCTTCGACTTAACTCTTCTG-CCAAAGACACACCAGACTTTCC  98

seq1  AGCCTGCCAAATGGAACCAGTAAGGCAGTCCATCTCAAGAGGGTGGCCTG  147
      ||| |||||||||||||||||||||||||||||||| |||||||||||||
seq2  AGCTTGCCAAATGGAACCAGTAAGGCAGTCCATCTC-AGAGGGTGGCCTG  147

seq1  GACCCTACTCTCTCTTACCCTGGCATTTTCAGTTCTTTTTTATCTACAAG  197
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GACCCTACTCTCTCTTACCCTGGCATTTTCAGTTC-TTTTTATCTACAAG  196

seq1  CTGCCCTCATGTTTTCTCTTTCTGTGTCCCTTATGAGCAACATGAGTTTA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCTCATGTTTTCTCTTTCTGTGTCCCTTATGAGCAACATGAGTTTA  246

seq1  GAACTTTTTCTTCTCATCAACCGTCTATCAAACTTACAATTTCCACTCCT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTTTTCTTCTCATCAACCGTCTATCAAACTTACAATTTCCACTCCT  296

seq1  AGCTACCTCAGATGCACATTGAAGCATCATATATGTCCCTGTGACTAAAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTACCTCAGATGCACATTGAAGCATCATATATGTCCCTGTGACTAAAA  346

seq1  GCATGACAAGAATCCCCTTCTGATTAAGAGTAGCTCACAATTGTAGCCAG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGACAAGAATCCCCTTCTGATTAAGAGTAGCTCACAATTGTAGCCAG  396

seq1  AAGAACGTGCTATATAATTTTCACCTCATGGAGAATATTATATATTTCTG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACGTGCTATATAATTTTCACCTCATGGAGAATATTATATATTTCTG  446

seq1  ATCATTGAGGACCTGGACCTACCTACTAGATCTGATCTAATCCATGACAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTGAGGACCTGGACCTACCTACTAGATCTGATCTAATCCATGACAA  496

seq1  ATTGACTCCCTTGATCTAAGGTTCACCGAGTTCTTCTTATTCTGATCCTC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGACTCCCTTGATCTAAGGTTCACCGAGTTCTTCTTATTCTGATCCTC  546

seq1  TGACCTCATTACCTCTGTCCAAGGAGCAGGACCCGGGTGCTTGAGGTCTC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTCATTACCTCTGTCCAAGGAGCAGGACCCGGGTGCTTGAGGTCTC  596

seq1  AGAGCCAAGAGTAGCCAGCAAGTTCATAAACCCAGGACATATACATTAAG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCAAGAGTAGCCAGCAAGTTCATAAACCCAGGACATATACATTAAG  646

seq1  TTGGCCAGCAGAAACAAGAAAGCCTTGCCATTTTCAAAAGTAGCCAGCTG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCCAGCAGAAACAAGAAAGCCTTGCCATTTTCAAAAGTAGCCAGCTG  696

seq1  ATTTATCAGGAGAACTAGCTGGGAAGTGCCTCCTAGCATACTGAAGATTG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATCAGGAGAACTAGCTGGGAAGTGCCTCCTAGCATACTGAAGATTG  746

seq1  ATTACACTGTTGCATGGCCTGCATGATATGCGTGTTCTAGGTTCCCAAGA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACACTGTTGCATGGCCTGCATGATATGCGTGTTCTAGGTTCCCAAGA  796

seq1  AACCTCGATAATGAAATATTCAGGCCTTCTCTCCTCTCCAACTCGACCCT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTCGATAATGAAATATTCAGGCCTTCTCTCCTCTCCAACTCGACCCT  846

seq1  GATCTTGTACAGATACAAGAGTCTTTGGCATTTCTACTTTCCCCAACATG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTGTACAGATACAAGAGTCTTTGGCATTTCTACTTTCCCCAACATG  896

seq1  GTGTGAACCTTTCTGCCTCTAAAGGATGGCATCCTTTATAGATTGTGGAT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGAACCTTTCTGCCTCTAAAGGATGGCATCCTTTATAGATTGTGGAT  946

seq1  ACATCAACATTCTCACTCTGTCAATGGGTCCTCCCAATTGTGTTTCTGAC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCAACATTCTCACTCTGTCAATGGGTCCTCCCAATTGTGTTTCTGAC  996

seq1  ACAGAAACCTCAGAATTATTCCTTCAGCACCAAAACGACTCACACTTTTC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAACCTCAGAATTATTCCTTCAGCACCAAAACGACTCACACTTTTC  1046

seq1  CCCCATGCTTGAAGTGGGGCTTAAATCACTCTCAATGGCTCAAGGAATCG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATGCTTGAAGTGGGGCTTAAATCACTCTCAATGGCTCAAGGAATCG  1096

seq1  TCAGGTACATTTTGTCTAAATTAGGAATTC  1127
      ||||||||||||||||||||||||||||||
seq2  TCAGGTACATTTTGTCTAAATTAGGAATTC  1126