MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-220E19
Chromosome	X (Build37)
Map Location	51,599,284 - 51,600,363
singlet/doublet	singlet
Overlap gene	LOC625476
Upstream gene	4632404H22Rik, 4930432H15Rik, LOC385527, Mospd1, LOC100040609, Etd, Cxx1c, LOC100040644, Cxx1a, Cxx1b, AW822252, 4930502E18Rik, 1700013H16Rik, EG547172, Zfp36l3, Xlr, LOC100040719, LOC100040730, LOC100040260, LOC100040271, LOC100040765, LOC194788, LOC100040789, LOC666072, LOC100040317
Downstream gene	LOC625508, LOC666096, LOC100040867, LOC100040894, LOC666122, LOC666135, LOC100038960, EG666151, EG666161, EG666199, 4930527E24Rik, LOC626274
Link	Open Mouse BAC browser

Click to get alignment info.

name	4632404H22Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78755 MGI:1926005
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930432H15Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73866 MGI:1921116
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC385527 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:385527
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	Mospd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70380 MGI:1917630
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040609 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040609
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 45 Proteins pseudo : _no_value

name	Etd (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69501 MGI:1916751
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cxx1c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72865 MGI:1920115
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040644 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040644
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Cxx1a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66158 MGI:1913408
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cxx1b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:553127 MGI:3576504
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	AW822252 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:331578 MGI:2148030
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	4930502E18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75013 MGI:1922263
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700013H16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75514 MGI:1922764
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs

name	EG547172 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:547172 MGI:3646091
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Zfp36l3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:333473 MGI:3525151
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Xlr (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22441 MGI:98976
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040719 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040719
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 ESTs, 9 Proteins

name	LOC100040730 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040730
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC100040260 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040260
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 86 ESTs, 26 Proteins

name	LOC100040271 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040271
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC100040765 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040765
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC194788 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:194788
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC100040789 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040789
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	LOC666072 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666072
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC100040317 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040317
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 5 ESTs, 1 Protein

name	LOC625476 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:625476
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC625508 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:625508
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins

name	LOC666096 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666096
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins

name	LOC100040867 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040867
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins

name	LOC100040894 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040894
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins

name	LOC666122 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666122
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins

name	LOC666135 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666135
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins

name	LOC100038960 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100038960
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	EG666151 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666151 MGI:3645943
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins

name	EG666161 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666161 MGI:3643207
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins

name	EG666199 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666199 MGI:3644332
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	4930527E24Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75140 MGI:1922390
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 5 ESTs, 1 Protein

name	LOC626274 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:626274
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins pseudo : _no_value

name	4632404H22Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142348852 GeneID:78755 MGI:1926005
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4632404H22 gene transcript_id : NM_030167.2

name	4930432H15Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:131888240 GeneID:73866 MGI:1921116
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930432H15 gene transcript_id : NM_028671.2

name	Mospd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802204 GeneID:70380 MGI:1917630
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : motile sperm domain containing 1 transcript_id : NM_027409.2

name	Etd (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31341018 GeneID:69501 MGI:1916751
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : embryonic testis differentiation transcript_id : NM_175147.2

name	Cxx1c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:115270961 GeneID:72865 MGI:1920115
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CAAX box 1 homolog C (human) transcript_id : NM_028375.3

name	Cxx1a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21313589 GeneID:66158 MGI:1913408
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CAAX box 1 homolog A (human) transcript_id : NM_024170.1

name	Cxx1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:65787324 GeneID:553127 MGI:3576504
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CAAX box 1 homolog B (human) transcript_id : NM_001018063.1

name	AW822252 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149271601 GeneID:331578 MGI:2148030
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AW822252 transcript_id : XM_001474711.1

name	4930502E18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110626043 GeneID:75013 MGI:1922263
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930502E18 gene transcript_id : NM_029142.1

name	1700013H16Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149271603 GeneID:75514 MGI:1922764
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs product : RIKEN cDNA 1700013H16 gene transcript_id : XM_135430.4

name	EG547172 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83001197 GeneID:547172 MGI:3646091
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : predicted gene, EG547172 transcript_id : XM_622034.2

name	Zfp36l3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:57222289 GeneID:333473 MGI:3525151
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 36, C3H type-like 3 transcript_id : NM_001009549.1

name	Xlr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142357146 GeneID:22441 MGI:98976
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : X-linked lymphocyte-regulated complex transcript_id : NM_011725.3

name	LOC100040719 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271612 GeneID:100040719
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 ESTs, 9 Proteins product : similar to X-linked lymphocyte-regulated protein pM1 transcript_id : XM_001475126.1

name	LOC100040260 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271604 GeneID:100040260
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 86 ESTs, 26 Proteins product : similar to Atf1 protein transcript_id : XM_001474817.1

name	LOC100040271 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271606 GeneID:100040271
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100040271 transcript_id : XM_001474837.1

name	LOC100040317 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271610 GeneID:100040317
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 4 ESTs, 1 Protein product : similar to Xlr-related, meiosis regulated, transcript variant 2 transcript_id : XM_001474869.1

name	LOC100040317 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271608 GeneID:100040317
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein product : similar to Xlr-related, meiosis regulated, transcript variant 1 transcript_id : XM_001474852.1

name	LOC625508 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:83001215 GeneID:625508
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins product : similar to Xlr-related, meiosis regulated transcript_id : XM_890086.1

name	LOC666096 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94407432 GeneID:666096
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins product : similar to Xlr-related, meiosis regulated transcript_id : XM_981599.1

name	LOC100040867 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271614 GeneID:100040867
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins product : similar to Xlr-related, meiosis regulated transcript_id : XM_001475416.1

name	LOC100040894 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271616 GeneID:100040894
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins product : similar to Xlr-related, meiosis regulated transcript_id : XM_001475448.1

name	LOC666122 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94407437 GeneID:666122
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins product : similar to Xlr-related, meiosis regulated transcript_id : XM_981768.1

name	LOC666135 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94407439 GeneID:666135
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins product : similar to Xlr-related, meiosis regulated transcript_id : XM_981842.1

name	EG666151 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94407443 GeneID:666151 MGI:3645943
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins product : predicted gene, EG666151 transcript_id : XM_981963.1

name	EG666161 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94407445 GeneID:666161 MGI:3643207
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins product : predicted gene, EG666161 transcript_id : XM_982040.1

name	4930527E24Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149271621 GeneID:75140 MGI:1922390
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 4 ESTs, 1 Protein product : RIKEN cDNA 4930527E24 gene, transcript variant 3 transcript_id : XM_976915.2

name	4930527E24Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149271619 GeneID:75140 MGI:1922390
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein product : RIKEN cDNA 4930527E24 gene transcript_id : XM_001471966.1

name	4632404H22Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313466 CCDS:CCDS30129.1 GeneID:78755 MGI:1926005
definition	codon_start : 1 product : hypothetical protein LOC78755 protein_id : NP_084443.1

name	4930432H15Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312034 GeneID:73866 MGI:1921116
definition	codon_start : 1 product : hypothetical protein LOC73866 protein_id : NP_082947.1

name	Mospd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312580 CCDS:CCDS30131.1 GeneID:70380 MGI:1917630
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005198 - structural molecule activity [Evidence IEA] codon_start : 1 product : motile sperm domain containing 1 protein_id : NP_081685.1

name	Etd (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28201997 GeneID:69501 MGI:1916751
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : embryonic testis differentiation-associated product : embryonic testis differentiation protein_id : NP_780356.1

name	Cxx1c (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13386306 GeneID:72865 MGI:1920115
definition	codon_start : 1 note : mammalian retrotransposon derived 8a product : CAAX box 1 homolog C protein_id : NP_082651.1

name	Cxx1a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313590 CCDS:CCDS30134.1 GeneID:66158 MGI:1913408
definition	codon_start : 1 product : mammalian retrotransposon derived 8b protein_id : NP_077132.1

name	Cxx1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:65787325 CCDS:CCDS30135.1 GeneID:553127 MGI:3576504
definition	codon_start : 1 note : mammalian retrotransposon derived 8c product : CAAX box 1 homolog B protein_id : NP_001018073.1

name	AW822252 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149271602 GeneID:331578 MGI:2148030
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474761.1

name	4930502E18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110626044 CCDS:CCDS30136.1 GeneID:75013 MGI:1922263
definition	codon_start : 1 product : hypothetical protein LOC75013 protein_id : NP_083418.1

name	1700013H16Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20946689 GeneID:75514 MGI:1922764
definition	codon_start : 1 product : hypothetical protein LOC75514 protein_id : XP_135430.1

name	EG547172 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83001198 GeneID:547172 MGI:3646091
definition	codon_start : 1 product : similar to 60S ribosomal protein L38 protein_id : XP_622034.2

name	Zfp36l3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:57222290 CCDS:CCDS30138.1 GeneID:333473 MGI:3525151
definition	GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : zinc finger protein 36-like 3 protein_id : NP_001009549.1

name	Xlr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6756021 CCDS:CCDS30139.1 GeneID:22441 MGI:98976
definition	codon_start : 1 note : X-linked gene family of B-cell surface antigens product : X-linked lymphocyte-regulated protein pM1 protein_id : NP_035855.1

name	LOC100040719 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271613 GeneID:100040719
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475176.1

name	LOC100040260 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271605 GeneID:100040260
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474867.1

name	LOC100040271 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271607 GeneID:100040271
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474887.1

name	LOC100040317 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271609 GeneID:100040317
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_001474902.1

name	LOC100040317 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271611 GeneID:100040317
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_001474919.1

name	LOC625508 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:83001216 GeneID:625508
definition	codon_start : 1 product : hypothetical protein protein_id : XP_895179.1

name	LOC666096 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94407433 GeneID:666096
definition	codon_start : 1 product : hypothetical protein protein_id : XP_986693.1

name	LOC100040867 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271615 GeneID:100040867
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475466.1

name	LOC100040894 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271617 GeneID:100040894
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475498.1

name	LOC666122 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94407438 GeneID:666122
definition	codon_start : 1 product : hypothetical protein protein_id : XP_986862.1

name	LOC666135 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94407440 GeneID:666135
definition	codon_start : 1 product : hypothetical protein protein_id : XP_986936.1

name	EG666151 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94407444 GeneID:666151 MGI:3645943
definition	codon_start : 1 product : hypothetical protein protein_id : XP_987057.1

name	EG666161 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94407446 GeneID:666161 MGI:3643207
definition	codon_start : 1 product : hypothetical protein protein_id : XP_987134.1

name	4930527E24Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149271620 GeneID:75140 MGI:1922390
definition	codon_start : 1 product : hypothetical protein LOC75140 protein_id : XP_001472016.1

name	4930527E24Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149271622 GeneID:75140 MGI:1922390
definition	codon_start : 1 product : hypothetical protein LOC75140 isoform 3 protein_id : XP_982009.2

name	LOC385527 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:385527
definition	number : 1 pseudo : _no_value

name	LOC385527 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:385527
definition	number : 2 pseudo : _no_value

name	LOC100040644 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040644
definition	number : 1 pseudo : _no_value

name	LOC100040644 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040644
definition	number : 2 pseudo : _no_value

name	LOC100040644 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040644
definition	number : 3 pseudo : _no_value

name	LOC100040730 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040730
definition	number : 1 pseudo : _no_value

name	LOC100040730 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040730
definition	number : 2 pseudo : _no_value

name	LOC100040765 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040765
definition	number : 1 pseudo : _no_value

name	LOC194788 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:194788
definition	number : 1 pseudo : _no_value

name	LOC194788 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:194788
definition	number : 2 pseudo : _no_value

name	LOC194788 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:194788
definition	number : 3 pseudo : _no_value

name	LOC194788 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:194788
definition	number : 4 pseudo : _no_value

name	LOC100040789 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040789
definition	number : 1 pseudo : _no_value

name	LOC100040789 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040789
definition	number : 2 pseudo : _no_value

name	LOC100040789 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040789
definition	number : 3 pseudo : _no_value

name	LOC100040789 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040789
definition	number : 4 pseudo : _no_value

name	LOC100040789 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040789
definition	number : 5 pseudo : _no_value

name	LOC100040789 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040789
definition	number : 6 pseudo : _no_value

name	LOC100040789 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040789
definition	number : 7 pseudo : _no_value

name	LOC100040789 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040789
definition	number : 8 pseudo : _no_value

name	LOC666072 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666072
definition	number : 1 pseudo : _no_value

name	LOC666072 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666072
definition	number : 2 pseudo : _no_value

name	LOC666072 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666072
definition	number : 3 pseudo : _no_value

name	LOC666072 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666072
definition	number : 4 pseudo : _no_value

name	LOC666072 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666072
definition	number : 5 pseudo : _no_value

name	LOC666072 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666072
definition	number : 6 pseudo : _no_value

name	LOC625476 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:625476
definition	number : 1 pseudo : _no_value

name	LOC625476 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:625476
definition	number : 2 pseudo : _no_value

name	LOC625476 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:625476
definition	number : 3 pseudo : _no_value

name	LOC625476 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:625476
definition	number : 4 pseudo : _no_value

name	LOC625476 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:625476
definition	number : 5 pseudo : _no_value

name	LOC100038960 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100038960
definition	number : 1 pseudo : _no_value

name	LOC100038960 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100038960
definition	number : 2 pseudo : _no_value

name	LOC100038960 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100038960
definition	number : 3 pseudo : _no_value

name	LOC100038960 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100038960
definition	number : 4 pseudo : _no_value

name	LOC100038960 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100038960
definition	number : 5 pseudo : _no_value

name	EG666199 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666199
definition	number : 1 pseudo : _no_value

name	EG666199 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666199
definition	number : 2 pseudo : _no_value

name	EG666199 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666199
definition	number : 3 pseudo : _no_value

name	EG666199 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666199
definition	number : 4 pseudo : _no_value

name	EG666199 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666199
definition	number : 5 pseudo : _no_value

name	EG666199 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666199
definition	number : 6 pseudo : _no_value

name	LOC100040609 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149271545 GeneID:100040609
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 45 Proteins product : similar to casein kinase 1, gamma 3 pseudo : _no_value transcript_id : XR_032024.1

name	LOC626274 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149271623 GeneID:626274
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins product : similar to Xlr-like pseudo : _no_value transcript_id : XR_030541.1

clone name	MSMg01-451B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333H24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-505G02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-353D22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-342J15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-075F15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-276O20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-095P13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-505I14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-538A23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-447N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-054N20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-058F11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-352I01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-375M11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-381I21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-433B21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-112F11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-536M22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-377J23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-389D18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-178N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-465I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-145O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160K04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273B14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-070O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123N23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068D14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018J10
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-220E19.b	B6Ng01-220E19.g
ACC	GA035893	GA035894
length	923	1,086
definition	B6Ng01-220E19.b	B6Ng01-220E19.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctttgttcagttctgagccccatttttaatggggttattttattt tctggagtccaccttcttgagttctttatatatattggatattagtcccc tatctgatttaggataggtaaagatccttttccaatctgttggtggtatt tttgtattatttacggtgtattttgccttgtagaagctttgcaactttat gatgtcccatttgtcaattccctattttaaagcacaagcttttgctgttc tattcaggagtttttcccctgtacccatatcttcgaggctttggactact ttctcctctataagtttcagtgtctctggttttatgtggagttccttaat ccacttagatttgacctcagtacaaggagataggaatggatcaatttaca ttcttctacatgataaccgcaagttgtgccagcaccatttgttgaaaatg ctgtcttttatccactggattgttttagctcccttgtcaaagatcaagtg accataggtgtgtggattcatctcagggtcttcaattcttttccattggt ctacttgtttgttgccctaccagtaccatgcaattttatcaaaattgctc tgtagtacagctttagatcaggcatggtgattccaccagaggttctttta tccttgagaagagtttttgctatcctatctccattgtcgttgagattgca gcttgtacaaccactctggtaatcagtctggcggttcttcaaaaaattga acatagtactaccagaggatccagcaataccctctcctgggcatatatcc agaagatgttccaaccggtaagaaggacacatgctctactatgtttcata agcagccttatttataatatccagaatctggaaaagaacccagttgcccc tcaacaaaggaatgtatacagaa	gaattctggcagaagtagtaggccttgatggcttcagggttctgattgtc ccatttgaggtagtctttcaggaacaccggtaaactggtgattcctgagg gttggagtgctctatttgtcctaggtagcagcaggtatccgtggatgtat atgaagttgtggccccagatatggagtgcagaagaagcaaggcagagctc accattgctgtatttgtccagaggagctgtcaggcagggaattgggggta ggggtctcacctggtgttcactggtggctgcagatatctgaggttgtggt tttagaggcatgtaactggaagatggagctcaaaggggtcagagcagata tcaaggctgctgaacttgcctcagtccccacatactggcttttggggctt gagtaactcacctgattggccctggcagcaacagacttctaggaatgcag tcagagctgtgctcaaggaaattgagtgtagaaggggcagagcttgctgc tgctgtgattgacatgcagggcatggacacacggctttcttcaataattt aagtatatattatggaatgaacataaatatattgttatccaattttttta tattagagctcaatatagttttctatttagatgataaggctagcaataag caacggaggtaaaacactgaaacttgtgagcactgggaatccaaaattgt agattacagaaaagagaaaattcaccaactacaaagattgaagaaatggt aaagggattttcaacaccatcagtaaaaattagatgcaaatcgagtggag ttttcaaaattataaaggaaagtattttttcattgttatatatctgtgct tatctatgtatgtatatactacatttaggtatgtataaatttataaataa aacatactgagttcatttatggttgatcctatgtgtttcagactgatcac tttagattactgagttacctattgagggttctccttgtatattctgtttt ttctcagtaaccacctcattaccagccagctctttttcctagtgtggaat ttttgagagatttccaatattctctcaatagtatcc
quality values	Open. Hide. 58 33 32 20 58 58 54 58 58 49 58 58 25 20 62 62 62 62 49 54 62 62 62 62 62 62 47 62 62 62 62 54 51 51 44 49 38 38 37 56 44 62 59 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 54 62 59 62 62 62 62 62 62 62 62 62 59 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 54 47 49 47 62 62 62 62 62 62 54 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 56 62 62 62 62 47 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 52 62 52 62 62 62 62 62 62 49 62 62 62 62 62 62 62 54 62 62 62 54 62 62 62 46 62 62 52 62 62 62 62 62 42 62 62 62 62 62 62 62 54 58 54 58 58 58 58 58 58 52 50 52 58 54 58 58 58 58 54 54 58 58 58 58 52 58 58 58 54 58 52 47 40 47 54 52 58 58 52 54 45 54 41 58 52 58 58 54 52 58 42 58 58 54 52 46 39 46 54 58 37 41 54 54 40 54 54 54 54 52 54 37 52 46 41 39 52 54 58 58 54 46 39 51 42 52 39 28 58 40 35 52 48 58 46 54 34 22 23 47 50 27 48 23 22 25 32 13 41 50 58 46 50 58 58 51 41 50 47 47 47 47 35 45 30 49 46 15 54 20 50 58 58 54 54 50 50 46 50 50 47 36 47 49 47 32 50 32 49 28 39 52 50 43 40 27 32 32 32 54 25 40 39 51 50 19 23 19 49 36 36 31 41 26 52 21 26 40 39 25 42 48 38 32 50 58 31 53 39 42 39 25 36 41 49 35 41 53 25 33 38 27 32 32 21 29 25 12 49 54 50 50 21 31 33 39 34 33 37 37 50 29 30 39 30 39 39 34 49 52 32 19 58 32 29 26 32 33 25 20 24 26 18 32 49 21 6 49 30 39 42 39 17 37 25 21 54 12 19 31 32 19 31 33 32 28 15 8 15 35 25 11 29 13 39 25 40 34 18 11 40 25 40 21 52 29 21 24 23 30 30 28 37 37 25 35 39 22 39 40 20 17 17 9 22 31 32 26 14 33 24 45 16 29 25 20 15 23 12 26 17 11 22 18 15 22 32 31 37 31 40 33 39 33 32 28 34 27 19 30 8 20 15 13 17 16 17 10 10 21 11 16 7 12 25 9 6 9 6 10 26 31 23 23 32 32 23 31 29 24 17 10 9 7 19 8 25 31 31 15 31 16 12 12 15 16 9 6 9 8	Open. Hide. 62 47 47 39 62 62 54 62 54 62 62 59 62 56 38 62 59 49 62 62 62 59 62 62 62 62 59 59 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 59 62 62 42 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 54 54 62 62 62 54 62 62 54 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 54 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 54 62 62 62 62 54 58 58 58 58 58 51 58 48 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 45 54 58 58 54 52 58 58 58 58 54 58 58 58 58 58 54 58 58 49 54 58 58 58 58 54 58 54 58 58 54 58 58 46 54 52 52 54 52 58 54 58 58 47 58 58 58 54 54 54 54 52 54 58 58 58 58 58 58 48 49 58 58 42 50 50 54 54 58 54 51 52 54 51 49 58 58 51 51 51 54 51 44 46 54 53 58 58 58 58 58 40 52 53 50 46 47 51 53 58 42 54 58 41 37 58 50 53 53 53 51 51 58 58 51 52 41 50 47 58 48 52 41 54 40 58 53 28 50 50 30 58 37 51 51 50 49 40 52 52 53 58 39 58 41 50 43 37 58 39 18 58 34 39 58 58 51 50 52 51 51 58 50 58 25 44 50 43 52 50 51 49 23 50 39 47 44 42 36 38 54 53 39 38 50 37 53 54 52 37 49 51 32 52 39 53 39 53 39 42 42 38 54 38 32 54 32 54 28 54 54 54 40 37 46 39 32 34 39 30 31 47 45 39 51 28 44 30 38 41 22 42 47 42 52 35 51 54 53 37 44 44 30 39 54 34 22 54 39 37 26 54 54 40 41 23 32 51 32 31 26 21 31 34 40 40 43 32 49 49 49 13 28 38 32 17 32 35 35 31 27 46 25 32 32 34 52 32 22 33 27 42 33 30 46 46 51 36 44 51 46 31 21 51 30 27 40 46 30 21 22 33 51 42 29 24 37 33 51 46 46 46 9 31 25 31 32 33 9 30 45 25 33 38 36 31 37 31 46 18 30 31 21 27 43 25 31 30 30 30 37 18 33 31 46 25 13 13 31 31 29 42 26 26 31 31 41 46 25 31 15 46 31 26 30 39 31 25 25 33 39 31 31 46 33 25 31 26 31 29 8 6 46 46 37 30 19 32 30 31 35 34 25 18 18 30 32 31 31 31 32 14 8 10 38 18 23 31 33 27 12 33 29 31 31 32 16 26 24 43 18 20 31 14 38 19 25 37 31 33 17 14 31 32 44 31 31 11 28 7 31 19 25 27 34 32 16 17 19 26 20 22 29 22 13 28 30 29 21 48 26 6 4 17 9 23 19 6 10 11 6 4 4 10 8 25 7 8 20 13 39 36 39 30 9 7 13 28 20 24 26 18 11 17 6 6 5 10 19 18 9 7 21 11 6 27 7 6 9 16 27 16 28 28 21 11 29 33 47 27 8 13 8 24 7 7 18 5 10 13 3 3 3 16 30 28 8 11 18 9 9 4 5 3 30 10 13 21 13 24 16 15 11 15 4 6 5 6 12 8 5 17 3 4 4 4 7 14 15

Alignment Information

BAC End 1

BAC End 2

seq1: chrX_51599284_51600363
seq2: B6Ng01-220E19.g_66_1151 (reverse)

seq1  GGATACTAAT--GAGAATATTGGAATTCTCTC-AAAATTCCACACTTAGA  47
      |||||||| |  ||||||||||||| |||||| |||||||||||||  ||
seq2  GGATACTATTGAGAGAATATTGGAAATCTCTCAAAAATTCCACACTAGGA  50

seq1  AAAAGAGCT-GCTGGTAATGA-GTGGTTACTGAG-AAAAACAGAATATAC  94
      ||||||||| ||||||||||| |||||||||||| |||||||||||||||
seq2  AAAAGAGCTGGCTGGTAATGAGGTGGTTACTGAGAAAAAACAGAATATAC  100

seq1  AGGGAGGAACCCTCAATAGGTAACTCAGTAATCTAAAGTGATCAGTCTGA  144
      | ||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGA-GAACCCTCAATAGGTAACTCAGTAATCTAAAGTGATCAGTCTGA  149

seq1  AACACATAGGATCAACCATAAATGAACTCAGTATGTTTTATTTATAAATT  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACATAGGATCAACCATAAATGAACTCAGTATGTTTTATTTATAAATT  199

seq1  TATACATACCTAAATGTAGTATATACATACATAGATAAGCACAGATATAT  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACATACCTAAATGTAGTATATACATACATAGATAAGCACAGATATAT  249

seq1  AACAATG-AAAAATACTTTCCTTTATAATTTTGAAAACTCCACTCGATTT  293
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATGAAAAAATACTTTCCTTTATAATTTTGAAAACTCCACTCGATTT  299

seq1  GCATCTAATTTTTACTGATGGTGTTGAAAATCCCTTTACCATTTCTTCAA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTAATTTTTACTGATGGTGTTGAAAATCCCTTTACCATTTCTTCAA  349

seq1  TCTTTGTAGTTGGTGAATTTTCTCTTTTCTGTAATCTACAATTTTGGATT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGTAGTTGGTGAATTTTCTCTTTTCTGTAATCTACAATTTTGGATT  399

seq1  CCCAGTGCTCACAAGTTTCAGTGTTTTACCTCCGTTGCTTATTGCTAGCC  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTGCTCACAAGTTTCAGTGTTTTACCTCCGTTGCTTATTGCTAGCC  449

seq1  TTATCATCTAAATAGAAAACTATATTGAGCTCTAATATAAAAAAATTGGA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCATCTAAATAGAAAACTATATTGAGCTCTAATATAAAAAAATTGGA  499

seq1  TAACAATATATTTATGTTCATTCCATAATATATACTTAAATTATTGAAGA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAATATATTTATGTTCATTCCATAATATATACTTAAATTATTGAAGA  549

seq1  AAGCCGTGTGTCCATGCCCTGCATGTCAATCACAGCAGCAGCAAGCTCTG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCGTGTGTCCATGCCCTGCATGTCAATCACAGCAGCAGCAAGCTCTG  599

seq1  CCCCTTCTACACTCAATTTCCTTGAGCACAGCTCTGACTGCATTCCTAGA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTCTACACTCAATTTCCTTGAGCACAGCTCTGACTGCATTCCTAGA  649

seq1  AGTCTGTTGCTGCCAGGGCCAATCAGGTGAGTTACTCAAGCCCCAAAAGC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGTTGCTGCCAGGGCCAATCAGGTGAGTTACTCAAGCCCCAAAAGC  699

seq1  CAGTATGTGGGGACTGAGGCAAGTTCAGCAGCCTTGATATCTGCTCTGAC  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTATGTGGGGACTGAGGCAAGTTCAGCAGCCTTGATATCTGCTCTGAC  749

seq1  CCCTTTGAGCTCCATCTTCCAGTTACATGCCTCTAAAACCACAACCTCAG  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTGAGCTCCATCTTCCAGTTACATGCCTCTAAAACCACAACCTCAG  799

seq1  ATATCTGCAGCCACCAGTGAACACCAGGTGAGACCCCTACCCCCAATTCC  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTGCAGCCACCAGTGAACACCAGGTGAGACCCCTACCCCCAATTCC  849

seq1  CTGCCTGACAGCTCCTCTGGACAAATACAGCAATGGTGAGCTCTGCCTTG  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTGACAGCTCCTCTGGACAAATACAGCAATGGTGAGCTCTGCCTTG  899

seq1  CTTCTTCTGCACTCCATATCTGGGGCCACAACTTCATATACATCCACGGA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTCTGCACTCCATATCTGGGGCCACAACTTCATATACATCCACGGA  949

seq1  TACCTGCTGCTACCTAGGACAAATAGAGCACTCCAACCCTCAGGAATCAC  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGCTGCTACCTAGGACAAATAGAGCACTCCAACCCTCAGGAATCAC  999

seq1  CAGTTTACCGGTGTTCCTGAAAGACTACCTCAAATGGGACAATCAGAACC  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTACCGGTGTTCCTGAAAGACTACCTCAAATGGGACAATCAGAACC  1049

seq1  CTGAAGCCATCAAGGCCTACTACTTCTGCCAGAATTC  1080
      |||||||||||||||||||||||||||||||||||||
seq2  CTGAAGCCATCAAGGCCTACTACTTCTGCCAGAATTC  1086

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BAC

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Alignment Information