BAC Information

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BAC

Clone NameB6Ng01-224I03
ChromosomeX (Build37)
Map Location 43,475,081 - 43,476,000
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040038, EG385346
Downstream geneLOC100040075, Actrt1, EG245405, LOC665632
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-224I03.bB6Ng01-224I03.g
ACCGA038948GA038949
length1,2071,060
definitionB6Ng01-224I03.b B6Ng01-224I03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaatttatggaatggcccttatgtcaaatcagatatttgttact
tatttccaaaagatttgtgcaaaaattttactagtatatcttgcaggcag
gacactattttgatccaagaatctgtggctggattgctgtttacatttct
acttaggtaacttgcataatatcttctgataccaaagacagtaggacaca
ggtgtgtaaaggttctctgtaggcaaaatcaagatctctccatttccaaa
gggctgtgtaggtgttttcttcagcaaaggaaacttgctgtgagtttgtg
gaaagtaagccataatcttagcaacagcctgtgttgttttagaatttccc
atagaactcctttggccaacagttcagtttcctgtaacccaatcatgggc
aaagctattatcattttgttaaagaaaactaggaatgaaattattcctaa
tagttgttatatctatgtatcttagttactttactattcttatgatgaaa
catcattaccaaatgcagttgaggaaggaagtgtttaattggcatatata
tctttaattacagtccagtgacactatatttgagttacaaggctggaact
taaaatttgcaggaacctggagacattagatgcttcagaggctatatatg
agtgctgcatactggcttgctcctcatagcttgtttgtcctgctttcttg
aagcactccagaccaccagcccttacatggcaacatgaacagtgtggtga
accttcttacatcaatcactaattaagaacatgccctacagatttaatcc
tgaccttatgaaggcattttcctaattgaagttctcttctctcaagtaac
tttaacttgtatgaagttgaaataaacactccagtacaccatacatcatt
gcgtaccgaacacaatcatagaatcttcttaataaattagaaggtaatta
taaaagaggtccactagtggatactgttcagagactgagagattttggat
atacagatttaaattttcttaaaggccttccctcagggctagagtacctt
tgtggaacagaagtggatagagcatagtgtggggtgactccacttaatag
ctcatccatacaagaacagtactcatatgactccagagtgcaacaccacc
caattcgactcgaagttcgaatgtgcattagtccagcttatcagaagatg
gcttcat

gaattcatcactttttaaagaaatgagtttttgcaacagatggggatcac
tataaaaatgttattcaaaatacagagtcatggaacctagtataaatgga
tatatctaaaaagcactcttgcaccaaaggctaaggaaactttgcaaaag
aggaaatagaaagattttatgagccagaagttcctgaagtttgctctgaa
tttttgtctcctagtaacatcagaaactatatcttaatattctcataaat
gtgactgactaaacatgatttgaataaggatgacactaatgacatgtcaa
agtggacagggaaaagcttaaaatccctgaaccccatataaacaacaagt
aactgaaattttaagagctgaaaaaatattcttcctcaaggaagaataca
ccaaatgattattaagtgccaaatgattggtaatgaaaacatgcaattaa
tatcatggactaaactagttatgtttagaaatacatatctatatacaaat
acatatatgcatgcacaacgagtcaaaagggttctgtgaattaaaaaagg
gtggagagacgtttatggaagaggttgaagggaaaagggacaaaggatac
atcttataattaaattataatttgaaaaaagaaaaattgtaaatagtaga
aagtattgaagcttcagtctgtccagttcttaattttacgtaattattgc
tatgatttgtttttacgaaatatgtcattagctttctggagtagattatt
ggacatataattacttcagaaaataccagtcagtaaaaccagtagtgacg
atgtaggccaatagagagatcagttacatttactcttatccaaataattg
ataaacaattgaaaatggggatcaaagtaatccctgctcatttttttttt
ttgccgacttgacacaagctaatactcatctaagaagaggaattttaatt
gggaaatgtattgttagtttaggaaagtatgtaaagaacatgttttgaat
aataatgatgtgggaagatccagaacactgcgggttttgcatccttgcca
agtgttccta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_43475081_43476000
seq2: B6Ng01-224I03.g_208_1127

seq1  TTTGCAAAAGAGGAAATAGAAAGATTTTATGAGCCAGAAGTTCCTGAAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCAAAAGAGGAAATAGAAAGATTTTATGAGCCAGAAGTTCCTGAAGT  50

seq1  TTGCTCTGAATTTTTGTCTCCTAGTAACATCAGAAACTATATCTTAATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCTGAATTTTTGTCTCCTAGTAACATCAGAAACTATATCTTAATAT  100

seq1  TCTCATAAATGTGACTGACTAAACATGATTTGAATAAGGATGACACTAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATAAATGTGACTGACTAAACATGATTTGAATAAGGATGACACTAAT  150

seq1  GACATGTCAAAGTGGACAGGGAAAAGCTTAAAATCCCTGAACCCCATATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGTCAAAGTGGACAGGGAAAAGCTTAAAATCCCTGAACCCCATATA  200

seq1  AACAACAAGTAACTGAAATTTTAAGAGCTGAAAAAATATTCTTCCTCAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACAAGTAACTGAAATTTTAAGAGCTGAAAAAATATTCTTCCTCAAG  250

seq1  GAAGAATACACCAAATGATTATTAAGTGCCAAATGATTGGTAATGAAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAATACACCAAATGATTATTAAGTGCCAAATGATTGGTAATGAAAAC  300

seq1  ATGCAATTAATATCATGGACTAAACTAGTTATGTTTAGAAATACATATCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAATTAATATCATGGACTAAACTAGTTATGTTTAGAAATACATATCT  350

seq1  ATATACAAATACATATATGCATGCACAACGAGTCAAAAGGGTTCTGTGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACAAATACATATATGCATGCACAACGAGTCAAAAGGGTTCTGTGAA  400

seq1  TTAAAAAAGGGTGGAGAGACGTTTATGGAAGAGGTTGAAGGGAAAAGGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAAGGGTGGAGAGACGTTTATGGAAGAGGTTGAAGGGAAAAGGGA  450

seq1  CAAAGGATACATCTTATAATTAAATTATAATTTGAAAAAAGAAAAATTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGATACATCTTATAATTAAATTATAATTTGAAAAAAGAAAAATTGT  500

seq1  AAATAGTAGAAAGTATTGAAGCTTCAGTCTGTCCAGTTCTTAATTTTACG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGTAGAAAGTATTGAAGCTTCAGTCTGTCCAGTTCTTAATTTTACG  550

seq1  TAATTATTGCTATGATTTGTTTTTACGAAATATGTCATTAGCTTTCTGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATTGCTATGATTTGTTTTTACGAAATATGTCATTAGCTTTCTGGA  600

seq1  GTAGATTATTGGACATATAATTACTTCAGAAAATACCAGTCAGTAAAACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATTATTGGACATATAATTACTTCAGAAAATACCAGTCAGTAAAACC  650

seq1  AGTAGTGACGATGTAGGCCAATAGAGAGATCAAGTTACATTTACTCTTAT  700
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AGTAGTGACGATGTAGGCCAATAGAGAGATC-AGTTACATTTACTCTTAT  699

seq1  CCAAATAATTGATAAACAATTGAAAATGGGGATCAAAGTAATCCCTGCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATAATTGATAAACAATTGAAAATGGGGATCAAAGTAATCCCTGCTC  749

seq1  A-TTTTTTTTTTTGCCGACTTGACACAAGCT-ATACTCATCTAAGAAGAG  798
      | ||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ATTTTTTTTTTTTGCCGACTTGACACAAGCTAATACTCATCTAAGAAGAG  799

seq1  GAATTTTAATTGGGAAATGTTATTGTTAGTTTAGGAAAGTATGT-AAGGA  847
      ||||||||||||||||||| |||||||||||||||||||||||| ||| |
seq2  GAATTTTAATTGGGAAATG-TATTGTTAGTTTAGGAAAGTATGTAAAGAA  848

seq1  CATGTTTTTGAATAATAATTGATGTGGG-AGATCCCAGACACTGCGGGTT  896
      |||| ||||||||||||| ||||||||| ||||||   ||||||||||||
seq2  CATG-TTTTGAATAATAA-TGATGTGGGAAGATCCAGAACACTGCGGGTT  896

seq1  TTGCATCCTTGCCAAGTGGTCCTA  920
      |||||||||||||||||| |||||
seq2  TTGCATCCTTGCCAAGTGTTCCTA  920


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