MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-224K19
Chromosome	X (Build37)
Map Location	137,794,332 - 137,893,309
singlet/doublet	doublet
Overlap gene	Col4a6
Upstream gene	LOC100041446, EG245643, LOC666424, Prps1, Tsc22d3, Mid2, LOC619612, Tex13, LOC632685, Vsig1, Psmd10, Atg4a, LOC100038961
Downstream gene	Col4a5, Irs4, LOC633596, EG666488, LOC622901, EG436234, EG622956, Gucy2f, LOC623006, LOC100039023, Nxt2, EG434858, Kcne1l, Acsl4, Ppia-psx_1100.1, EG633736
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100041446 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041446
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	EG245643 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245643 MGI:3646547
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666424 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666424
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	Prps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19139 MGI:97775
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tsc22d3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14605 MGI:1196284
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Mid2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:23947 MGI:1344333
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC619612 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:619612
definition	note : eukaryotic translation initiation factor 2C, 2 pseudogene pseudo : _no_value

name	Tex13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:83555 MGI:1890544
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC632685 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:632685
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 192 ESTs, 2 Proteins pseudo : _no_value

name	Vsig1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78789 MGI:1926039
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Psmd10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:53380 MGI:1858898
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Atg4a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666468 MGI:2147903
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 15 ESTs, 6 Proteins

name	LOC100038961 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100038961
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 36 ESTs, 4 Proteins

name	Col4a6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:94216 MGI:2152695
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Col4a5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12830 MGI:88456
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Irs4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16370 MGI:1338009
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC633596 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:633596
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 345 ESTs, 7 Proteins

name	EG666488 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666488 MGI:3646868
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 4 Proteins pseudo : _no_value

name	LOC622901 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:622901
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 ESTs, 22 Proteins pseudo : _no_value

name	EG436234 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:436234 MGI:3647840
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	EG622956 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:622956 MGI:3647018
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Gucy2f (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245650 MGI:105119
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC623006 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:623006
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 659 ESTs, 8 Proteins pseudo : _no_value

name	LOC100039023 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039023
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 4 Proteins pseudo : _no_value

name	Nxt2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:237082 MGI:2147914
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG434858 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:434858 MGI:3642955
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA pseudo : _no_value

name	Kcne1l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66240 MGI:1913490
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Acsl4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50790 MGI:1354713
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	Ppia-psx_1100.1 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:606537
definition	note : peptidylprolyl isomerase A pseudogene x_1100.1 pseudo : _no_value

name	EG633736 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:633736 MGI:3646446
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 ESTs, 5 Proteins

name	LOC100041446 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272288 GeneID:100041446
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100041446 transcript_id : XM_001476409.1

name	EG245643 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802623 GeneID:245643 MGI:3646547
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG245643 transcript_id : NM_177750.3

name	Prps1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142368021 GeneID:19139 MGI:97775
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphoribosyl pyrophosphate synthetase 1 transcript_id : NM_021463.3

name	Tsc22d3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116517337 GeneID:14605 MGI:1196284
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : TSC22 domain family 3 transcript_id : NM_001077364.1

name	Tsc22d3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116517341 GeneID:14605 MGI:1196284
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : TSC22 domain family 3 transcript_id : NM_010286.3

name	Mid2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134023660 GeneID:23947 MGI:1344333
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : midline 2 transcript_id : NM_011845.2

name	Tex13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:24475713 GeneID:83555 MGI:1890544
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : testis expressed gene 13 transcript_id : NM_031381.2

name	Vsig1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142346492 GeneID:78789 MGI:1926039
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : V-set and immunoglobulin domain containing 1 transcript_id : NM_030181.2

name	Psmd10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254368 GeneID:53380 MGI:1858898
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : proteosome (prosome, macropain) 26S subunit, non-ATPase, 10 transcript_id : NM_016883.3

name	Atg4a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:74136554 GeneID:666468 MGI:2147903
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 15 ESTs, 6 Proteins product : autophagy-related 4A (yeast) transcript_id : NM_174875.3

name	LOC100038961 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272403 GeneID:100038961
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 36 ESTs, 4 Proteins product : similar to autophagin-2 transcript_id : XM_001471981.1

name	Col4a6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:16716478 GeneID:94216 MGI:2152695
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : procollagen, type IV, alpha 6 transcript_id : NM_053185.1

name	Col4a5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142348194 GeneID:12830 MGI:88456
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : procollagen, type IV, alpha 5 transcript_id : NM_007736.3

name	Irs4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:58331137 GeneID:16370 MGI:1338009
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : insulin receptor substrate 4 transcript_id : NM_010572.2

name	LOC633596 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272406 GeneID:633596
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 2 Proteins product : similar to high mobility group nucleosomal binding domain 2, transcript variant 2 transcript_id : XM_001472120.1

name	LOC633596 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272408 GeneID:633596
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 345 ESTs, 6 Proteins product : similar to high mobility group nucleosomal binding domain 2, transcript variant 1 transcript_id : XM_001472085.1

name	Gucy2f (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:56119097 GeneID:245650 MGI:105119
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : guanylate cyclase 2f transcript_id : NM_001007576.1

name	Nxt2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142378725 GeneID:237082 MGI:2147914
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nuclear transport factor 2-like export factor 2 transcript_id : NM_172782.2

name	Kcne1l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:10946897 GeneID:66240 MGI:1913490
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : potassium voltage-gated channel, Isk-related family, member 1-like transcript_id : NM_021487.1

name	Acsl4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:75992924 GeneID:50790 MGI:1354713
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : acyl-CoA synthetase long-chain family member 4 transcript_id : NM_001033600.1

name	Acsl4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:75992926 GeneID:50790 MGI:1354713
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : acyl-CoA synthetase long-chain family member 4 transcript_id : NM_019477.3

name	Acsl4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:75992923 GeneID:50790 MGI:1354713
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : acyl-CoA synthetase long-chain family member 4 transcript_id : NM_207625.2

name	EG633736 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149272417 GeneID:633736 MGI:3646446
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 ESTs, 5 Proteins product : predicted gene, EG633736 transcript_id : XM_001472450.1

name	LOC100041446 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272289 GeneID:100041446
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476459.1

name	EG245643 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244238 GeneID:245643 MGI:3646547
definition	codon_start : 1 product : hypothetical protein LOC245643 protein_id : NP_808418.1

name	Prps1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10946854 CCDS:CCDS30439.1 GeneID:19139 MGI:97775
definition	GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004749 - ribose phosphate diphosphokinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : phosphoribosyl pyrophosphate synthetase 1 protein_id : NP_067438.1

name	Tsc22d3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116517338 GeneID:14605 MGI:1196284
definition	GO_function : GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006916 - anti-apoptosis [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; glucocorticoid-induced leucine zipper; delta sleep inducing peptide, immunoreactor; TSC22-related inducible leucine zipper 3 product : glucocorticoid-induced leucine zipper isoform 1 protein_id : NP_001070832.1

name	Tsc22d3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116517342 CCDS:CCDS30440.1 GeneID:14605 MGI:1196284
definition	GO_function : GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006916 - anti-apoptosis [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; glucocorticoid-induced leucine zipper; delta sleep inducing peptide, immunoreactor; TSC22-related inducible leucine zipper 3 product : glucocorticoid-induced leucine zipper isoform 2 protein_id : NP_034416.3

name	Mid2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754694 GeneID:23947 MGI:1344333
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005874 - microtubule [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : midline 2 protein_id : NP_035975.1

name	Tex13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13878205 GeneID:83555 MGI:1890544
definition	codon_start : 1 product : testis expressed gene 13 protein_id : NP_113558.1

name	Vsig1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313488 CCDS:CCDS30443.1 GeneID:78789 MGI:1926039
definition	GO_component : GO:0016020 - membrane [Evidence IEA] codon_start : 1 exception : mismatches in translation note : glycoprotein A34 product : V-set and immunoglobulin domain containing 1 protein_id : NP_084457.1

name	Psmd10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31980811 CCDS:CCDS30444.1 GeneID:53380 MGI:1858898
definition	GO_component : GO:0005829 - cytosol [Evidence IEA]; GO:0043234 - protein complex [Evidence IEA] codon_start : 1 note : gankyrin; proteosome subunit p28; proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 product : proteosome (prosome, macropain) 26S subunit, non-ATPase, 10 protein_id : NP_058579.2

name	Atg4a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:74136555 GeneID:666468 MGI:2147903
definition	EC_number : 3.4.22.- codon_start : 1 exception : unclassified translation discrepancy note : autophagy-related cysteine endopeptidase 2; autophagy 4 homolog A; cysteine protease APG4A; autophagin 2; AUT-like 2, cysteine endopeptidase; APG4 (ATG4) autophagy-related homolog A product : autophagy-related 4A-like protein_id : NP_777364.3

name	LOC100038961 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272404 GeneID:100038961
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472031.1

name	Col4a6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:16716479 GeneID:94216 MGI:2152695
definition	GO_component : GO:0005604 - basement membrane [Evidence IDA]; GO:0005581 - collagen [Evidence IEA]; GO:0005587 - collagen type IV [Evidence IDA]; GO:0005737 - cytoplasm [Evidence IEA] GO_function : GO:0005198 - structural molecule activity [Evidence IDA] GO_process : GO:0030198 - extracellular matrix organization and biogenesis [Evidence IDA]; GO:0006817 - phosphate transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : procollagen, type IV, alpha 6 protein_id : NP_444415.1

name	Col4a5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:75677420 GeneID:12830 MGI:88456
definition	GO_component : GO:0005604 - basement membrane [Evidence IDA]; GO:0005581 - collagen [Evidence IEA]; GO:0005587 - collagen type IV [Evidence IDA]; GO:0005737 - cytoplasm [Evidence IEA] GO_function : GO:0030020 - extracellular matrix structural constituent conferring tensile strength [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0006817 - phosphate transport [Evidence IEA] codon_start : 1 note : collagen type IV alpha5 chain; procollagen type IV alpha 5 product : procollagen, type IV, alpha 5 protein_id : NP_031762.2

name	Irs4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58331138 CCDS:CCDS30445.1 GeneID:16370 MGI:1338009
definition	GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : insulin receptor substrate 4 protein_id : NP_034702.2

name	LOC633596 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272407 GeneID:633596
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_001472170.1

name	LOC633596 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272409 GeneID:633596
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_001472135.1

name	Gucy2f (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:56119098 CCDS:CCDS30446.1 GeneID:245650 MGI:105119
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0004383 - guanylate cyclase activity [Evidence ISS]; GO:0016849 - phosphorus-oxygen lyase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA] GO_process : GO:0009190 - cyclic nucleotide biosynthesis [Evidence IEA]; GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 product : guanylate cyclase 2f protein_id : NP_001007577.1

name	Nxt2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370162 GeneID:237082 MGI:2147914
definition	GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : nuclear transport factor 2-like export factor 2 protein_id : NP_766370.1

name	Kcne1l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10946898 CCDS:CCDS30447.1 GeneID:66240 MGI:1913490
definition	GO_component : GO:0016020 - membrane [Evidence IEA] codon_start : 1 note : minK-like protein product : potassium voltage-gated channel, Isk-related family, member 1-like protein_id : NP_067462.1

name	Acsl4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46518528 CCDS:CCDS30448.1 GeneID:50790 MGI:1354713
definition	EC_number : 6.2.1.3 GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005777 - peroxisome [Evidence IEA] GO_function : GO:0003824 - catalytic activity [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0004467 - long-chain-fatty-acid-CoA ligase activity [Evidence IEA] [Evidence ISS]; GO:0000287 - magnesium ion binding [Evidence IEA] GO_process : GO:0006631 - fatty acid metabolism [Evidence IEA]; GO:0006629 - lipid metabolism [Evidence IEA]; GO:0008152 - metabolism [Evidence IEA]; GO:0019217 - regulation of fatty acid metabolism [Evidence TAS] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; fatty acid-Coenzyme A ligase, long chain 4 product : acyl-CoA synthetase long-chain family member 4 isoform 1 protein_id : NP_997508.1

name	Acsl4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:75992925 GeneID:50790 MGI:1354713
definition	EC_number : 6.2.1.3 GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005777 - peroxisome [Evidence IEA] GO_function : GO:0003824 - catalytic activity [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0004467 - long-chain-fatty-acid-CoA ligase activity [Evidence IEA] [Evidence ISS]; GO:0000287 - magnesium ion binding [Evidence IEA] GO_process : GO:0006631 - fatty acid metabolism [Evidence IEA]; GO:0006629 - lipid metabolism [Evidence IEA]; GO:0008152 - metabolism [Evidence IEA]; GO:0019217 - regulation of fatty acid metabolism [Evidence TAS] codon_start : 1 note : isoform 2 is encoded by transcript variant 3; fatty acid-Coenzyme A ligase, long chain 4 product : acyl-CoA synthetase long-chain family member 4 isoform 2 protein_id : NP_001028772.1

name	Acsl4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:75992927 GeneID:50790 MGI:1354713
definition	EC_number : 6.2.1.3 GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005777 - peroxisome [Evidence IEA] GO_function : GO:0003824 - catalytic activity [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0004467 - long-chain-fatty-acid-CoA ligase activity [Evidence IEA] [Evidence ISS]; GO:0000287 - magnesium ion binding [Evidence IEA] GO_process : GO:0006631 - fatty acid metabolism [Evidence IEA]; GO:0006629 - lipid metabolism [Evidence IEA]; GO:0008152 - metabolism [Evidence IEA]; GO:0019217 - regulation of fatty acid metabolism [Evidence TAS] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; fatty acid-Coenzyme A ligase, long chain 4 product : acyl-CoA synthetase long-chain family member 4 isoform 2 protein_id : NP_062350.3

name	EG633736 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149272418 GeneID:633736 MGI:3646446
definition	codon_start : 1 product : similar to 60S ribosomal protein L38 protein_id : XP_001472500.1

name	LOC666424 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666424
definition	number : 2 pseudo : _no_value

name	LOC666424 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666424
definition	number : 1 pseudo : _no_value

name	EG436234 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:436234
definition	number : 1 pseudo : _no_value

name	EG622956 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:622956
definition	number : 1 pseudo : _no_value

name	LOC632685 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149272291 GeneID:632685
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 192 ESTs, 2 Proteins product : similar to ribosomal protein S7 pseudo : _no_value transcript_id : XR_032787.1

name	EG666488 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149272405 GeneID:666488 MGI:3646868
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 4 Proteins product : predicted gene, EG666488 pseudo : _no_value transcript_id : XR_035647.1

name	LOC622901 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149272411 GeneID:622901
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 ESTs, 22 Proteins product : similar to heat shock protein 1, beta pseudo : _no_value transcript_id : XR_030584.1

name	LOC623006 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149272414 GeneID:623006
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 659 ESTs, 8 Proteins product : similar to retinoblastoma-binding protein mRbAp46 pseudo : _no_value transcript_id : XR_030613.1

name	LOC100039023 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149272410 GeneID:100039023
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 4 Proteins product : similar to 60S ribosomal protein pseudo : _no_value transcript_id : XR_030569.1

name	EG434858 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:85060509 GeneID:434858 MGI:3642955
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG434858 pseudo : _no_value transcript_id : NR_002883.1

clone name	MSMg01-218A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-198M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-470C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-153B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-049G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-107J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-495J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-143O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-173L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-072B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322C11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158B21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158B21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058G22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092H10
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-224K19.b	B6Ng01-224K19.g
ACC	GA039066	GA039067
length	1,096	1,174
definition	B6Ng01-224K19.b	B6Ng01-224K19.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(137,794,332 - 137,795,429)	(137,892,130 - 137,893,309)
sequence	gaattctttaagactagtgtggtctaaaagactgaagtgatctcagttca gattctgcttctgacaaagactagttctgagaaagttcttacagctccaa actcctcacaatgggattgttccaaaaatcacataagacaagttttgtgc acagagtaccacagatgttaacactagggaaacatctgtacagacggaaa gttaatctctcttagaaaaacataacttccaacagagactaatcataagc aggaaacagaaaagatccatttgagagtcttgcactgcttttgttatggt ggaatttcatttcatttggagagaatatttatgatcatttgatattcttt caggtttagatgaagtcccttggctctttaattcccccgaggcactggtg gctcgtggtatgtgggaaacaagttccttccaagtcatgggaatctctgc agcatcagagagagggtgacacttttcctatgtgaataccaggaagatgt ggttatcttattaaagcttcacaagaaagttagcatagagaggtattgaa agtcatgatttatatttgcaaataaggaaactgagacacaaagtgtgggt gagctacactatctaggaatatgtagtttctaaaccccgaggtagatttt acttatatgtctgtttagaacatgtgatgttcaccagcaatctgcatagc ctcttcttgaacagtaagtgtctttctcttcaaaaacagccacatgggcg tttgagctgttaaaagattttgtcattggaaaactattgtgtatgtgatt tatatgtgcattcatataagaacacacacacacacacagtccaataattt aaaaaaattaaggggttggactggttattggttgaccatcccctagtctc tgtttcatcccctgtccttacattttttgtagacagataaattttgggta gaagagtttgtggatgggttggtgttcttatcgctccctgggattcttgc ctggctacaggaggtggcctcttcaggttcacatactcaatgctttcagt cacagctaagtcaccaaaattgattctttgggagcctcccttatcc	gaattccaggtcataaaattagattcccagaattcttatttcaacaaacc tttctccaagcaaacaaataacaggccccatgtgggtcagccacaggagc ctgacttgactgaaacaaagaattcatgctacctttcctgcatttcaatg taaaacaagctactgtatatatacttttattctaggttggttttctgcta atagttgggatgtcagataatgaccaggagtaaaacttgtaaatagagtt ggtggccttttgaaaacatcatgtaagcatcattgtactgtcttgttgtg tcaattaggagttacactgggtgtgacaggctgttgtatatatcatgaag tccttcaaagatgccaccaccttaaccagattgtttcttgatggcttaat aaaaggtcccagctgaataggctactcctaaatatcgtagatgaggggac atcgcaattataacattccattacacaggcacaagattcttgttagaaca catgacaaatgtggtccagaatacctatagaaatagtttgagcaactcca atccaaaatccagtatctaaagtgctccaaaacctaaagtattttgtgtg ccagcatgaacccatgaggacaaaattctaaactatgaaacttttgtttc atatataaaattattaatgaaattacctttaggttatgggtttaggaagt atatgaatgacacatgagcttggtgtttagacttgagtgctatccctaaa atatttcattatatgcatataaatattccgtgtcacccgcttaaaataaa gcataaatacttcttttgctaaacatttcaggtaagaaccagtcagtgtg tcttactcaggatgtagacgaggaatttgagttttatatgggtttataac ttgtaggctagggacctgtcaaaaacatgtcacaaggaaatcattgaata ttgccctatattttacagactcatcctctggtgcagttgatcttgtaact cttcacactgaaagtggcgttattcatgtaagaatcacaagcatcagtgc aatgcagttttgtcattcacatgtggtgtgtattggcgcctcctcctcac attttctcacggaagtcttttattatattcataagtattatggtcaggct tacttgtaagaaaatttctataca
quality values	Open. Hide. 58 26 27 35 58 58 58 58 28 50 41 62 62 32 42 39 62 62 62 62 62 47 56 62 54 56 62 62 62 62 47 47 50 38 24 32 27 56 56 20 44 59 62 59 59 62 62 62 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 43 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 58 58 58 58 58 48 58 58 58 54 58 54 58 58 58 58 58 58 54 49 58 58 58 58 58 58 58 58 52 54 54 58 58 58 58 58 54 54 58 58 58 58 54 58 58 52 58 47 58 54 58 52 54 41 58 58 58 58 58 54 58 58 54 54 58 54 51 58 54 54 54 58 54 58 58 58 51 50 58 51 52 50 58 37 49 58 58 51 49 58 58 58 30 46 42 53 52 50 58 58 54 53 58 53 58 58 49 52 58 58 50 51 51 50 52 50 51 39 41 51 58 53 52 51 58 51 53 39 39 39 54 52 52 53 58 58 49 53 45 49 58 53 51 58 58 58 49 39 29 58 40 51 40 39 31 58 58 49 50 49 58 53 53 53 50 47 51 52 53 53 51 31 58 51 50 33 58 43 34 41 35 58 58 58 41 31 58 53 47 50 38 35 39 39 42 50 50 50 52 53 53 33 44 41 52 51 38 54 54 42 52 53 40 53 39 44 49 39 42 40 40 42 32 35 49 41 42 51 32 52 45 54 39 45 40 53 45 45 41 24 54 54 54 49 45 37 42 42 45 32 52 34 40 40 48 54 47 31 28 54 45 52 46 13 42 41 53 35 39 42 54 54 51 37 53 27 54 54 41 37 29 40 32 28 39 31 28 37 53 52 52 37 37 40 31 45 53 31 47 33 37 29 52 31 31 34 18 53 45 32 33 26 39 53 45 32 31 29 34 34 31 29 45 32 37 31 38 33 31 33 24 21 41 21 42 31 42 28 45 31 41 20 42 23 41 30 31 31 30 27 31 36 39 33 34 25 51 31 33 46 46 51 46 46 31 24 34 28 6 12 46 46 31 25 25 34 34 30 18 32 42 37 16 32 31 31 30 35 31 30 31 31 31 25 33 33 34 24 48 48 31 31 38 27 35 38 31 30 24 31 21 46 30 35 33 31 31 48 48 31 25 32 24 30 32 28 31 30 34 24 31 48 48 47 46 30 27 17 27 9 32 22 23 32 32 18 25 47 22 31 48 41 24 8 10 24 18 26 14 20 38 11 37 11 31 44 25 19 17 17 30 22 22 31 48 33 14 17 26 22 21 33 9 14 15 6 10 34 32 21 23 19 27 31 43 30 8 19 36 28 34 22 10 14 24 20 33 15 22 22 21 28 16 16 21 21 19 32 11 32 11 31 18 16 25 12 6 6 9 7 37 21 14 25 18 11 17 21 8 19 24 18 27 13 10 6 9 10 16 28 7 23 40 7 9 14 24 28 19 12 15 13 14 21 24 20 7 3 4 10 20 20 28 9 6 6 11 14 11 24 16 8 28 18 20 27 7 8 40 6 13 5 12 15 16 12 28 19 5 6 18 7 19 20	Open. Hide. 62 47 56 47 62 62 47 37 62 62 51 32 35 38 21 21 21 21 44 36 22 38 43 43 62 62 62 62 47 62 62 62 62 62 62 62 62 62 62 62 62 49 59 62 59 59 62 62 62 62 62 62 54 62 62 62 59 49 62 56 62 59 49 49 59 59 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 59 59 59 62 62 59 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 53 62 62 62 62 62 62 62 62 62 62 62 62 62 58 54 54 58 58 54 58 58 54 58 58 58 58 58 54 58 58 54 58 54 58 58 54 39 58 58 58 58 58 58 54 54 54 58 58 54 52 54 58 58 58 54 58 54 58 58 54 58 58 58 58 58 58 58 58 52 58 54 52 49 42 58 58 51 58 58 58 58 58 48 54 58 53 51 58 58 58 58 53 58 51 50 58 58 54 45 39 58 58 58 46 50 58 58 51 51 58 49 46 54 53 53 54 58 58 54 58 49 58 52 58 49 51 53 39 27 58 58 40 49 58 53 50 58 58 51 53 47 41 58 58 58 58 39 53 50 53 58 50 41 50 53 53 53 58 58 49 40 58 58 50 50 46 36 21 49 51 36 50 58 58 50 50 53 53 53 41 58 49 43 41 53 53 53 53 54 54 52 54 54 54 49 51 37 54 49 39 39 53 53 42 45 53 38 54 54 41 39 52 49 52 38 51 47 42 39 33 54 40 42 49 33 53 54 52 54 41 40 20 30 33 32 45 35 51 49 46 32 54 45 52 34 39 45 53 36 42 32 31 40 53 40 53 53 45 45 41 32 32 53 32 53 53 31 25 45 33 33 42 53 32 53 31 53 45 32 32 32 31 45 51 45 47 28 34 32 32 36 36 40 35 49 47 31 31 51 51 51 31 33 24 51 42 31 38 37 31 43 31 39 36 31 36 32 31 31 41 42 51 43 39 38 32 12 26 36 31 23 38 26 34 31 25 47 38 31 29 25 43 31 48 48 31 31 31 48 42 32 33 42 34 35 48 31 31 31 37 21 33 36 37 46 46 29 30 31 31 30 46 33 27 25 32 46 46 26 25 25 24 20 11 37 23 35 32 37 31 31 31 32 37 31 25 29 31 26 31 35 36 25 32 31 31 43 33 11 25 13 38 32 31 25 31 34 37 24 22 44 14 14 21 26 18 44 38 31 42 28 42 48 48 24 31 24 23 29 19 44 9 34 48 11 16 16 8 32 24 17 31 31 27 32 15 26 27 32 21 8 44 31 10 14 30 31 36 32 34 28 48 48 48 30 19 10 21 23 21 24 27 24 22 22 11 19 20 48 26 21 33 18 25 31 9 22 10 31 20 19 24 24 11 43 19 15 12 6 9 11 34 48 24 19 10 17 5 21 19 32 33 22 22 13 19 26 29 20 32 27 16 9 23 9 10 18 14 20 28 24 17 6 20 28 24 16 21 28 28 20 10 28 11 6 5 6 15 17 13 14 40 23 20 13 17 19 17 13 25 6 10 7 22 9 8 19 21 6 4 7 6 26 27 15 24 12 25 9 4 6 13 14 13 24 24 9 7 18 20 11 20 13 15 3 10 11 18 28 30 20 6 2 4 12 9 8 8 6 13 18 6 7 4 4 13 7 12 6 12 2 13 5 6 24 7 6 3 4 12 9 5 12 16 10 7 12 6 5 10 10 14 30 28 16 13 6 18 6 4 3 7 17 16 5 4 15 7 13 17 15 6 6 4 6 5 8 3 6 10 4 2 3 6 4 2 9 4 4 3 1 3 18 4 6 9 13 3 1 5 2 2 4 3 5 2 5 5 10 8 8 15 17 4 4 28 22 18 9 16 20 9 10 4

Alignment Information

BAC End 1

BAC End 2

seq1: chrX_137794332_137795429
seq2: B6Ng01-224K19.b_47_1142

seq1  GAATTCTTTAAGACTAGTGTGGTCTAAAAGACTGAAGTGATCTCAGTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAAGACTAGTGTGGTCTAAAAGACTGAAGTGATCTCAGTTCA  50

seq1  GATTCTGCTTCTGACAAAGACTAGTTCTGAGAAAGTTCTTACAGCTCCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTGCTTCTGACAAAGACTAGTTCTGAGAAAGTTCTTACAGCTCCAA  100

seq1  ACTCCTCACAATGGGATTGTTCCAAAAATCACATAAGACAAGTTTTGTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTCACAATGGGATTGTTCCAAAAATCACATAAGACAAGTTTTGTGC  150

seq1  ACAGAGTACCACAGATGTTAACACTAGGGAAACATCTGTACAGACGGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGTACCACAGATGTTAACACTAGGGAAACATCTGTACAGACGGAAA  200

seq1  GTTAATCTCTCTTAGAAAAACATAACTTCCAACAGAGACTAATCATAAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATCTCTCTTAGAAAAACATAACTTCCAACAGAGACTAATCATAAGC  250

seq1  AGGAAACAGAAAAGATCCATTTGAGAGTCTTGCACTGCTTTTGTTATGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAACAGAAAAGATCCATTTGAGAGTCTTGCACTGCTTTTGTTATGGT  300

seq1  GGAATTTCATTTCATTTGGAGAGAATATTTATGATCATTTGATATTCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTTCATTTCATTTGGAGAGAATATTTATGATCATTTGATATTCTTT  350

seq1  CAGGTTTAGATGAAGTCCCTTGGCTCTTTAATTCCCCCGAGGCACTGGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTTAGATGAAGTCCCTTGGCTCTTTAATTCCCCCGAGGCACTGGTG  400

seq1  GCTCGTGGTATGTGGGAAACAAGTTCCTTCCAAGTCATGGGAATCTCTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCGTGGTATGTGGGAAACAAGTTCCTTCCAAGTCATGGGAATCTCTGC  450

seq1  AGCATCAGAGAGAGGGTGACACTTTTCCTATGTGAATACCAGGAAGATGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCAGAGAGAGGGTGACACTTTTCCTATGTGAATACCAGGAAGATGT  500

seq1  GGTTATCTTATTAAAGCTTCACAAGAAAGTTAGCATAGAGAGGTATTGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATCTTATTAAAGCTTCACAAGAAAGTTAGCATAGAGAGGTATTGAA  550

seq1  AGTCATGATTTATATTTGCAAATAAGGAAACTGAGACACAAAGTGTGGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATGATTTATATTTGCAAATAAGGAAACTGAGACACAAAGTGTGGGT  600

seq1  GAGCTACACTATCTAGGAATATGTAGTTTCTAAACCCCGAGGTAGATTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTACACTATCTAGGAATATGTAGTTTCTAAACCCCGAGGTAGATTTT  650

seq1  ACTTATATGTCTGTTTAGAACATGTGATGTTCACCAGCAATCTGCATAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATATGTCTGTTTAGAACATGTGATGTTCACCAGCAATCTGCATAGC  700

seq1  CTCTTCTTGAACAGTAAGTGTCTTTCTCTTCAAAAACAGCCACATGGGCG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCTTGAACAGTAAGTGTCTTTCTCTTCAAAAACAGCCACATGGGCG  750

seq1  TTTGAGCTGTTAAAAGATTTTGTCATTGGAAAACTATTGTGTATGTGATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGCTGTTAAAAGATTTTGTCATTGGAAAACTATTGTGTATGTGATT  800

seq1  TATATGTGCATTCATATAAGAACACACACACACACACAGTCCAATAATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGTGCATTCATATAAGAACACACACACACACACAGTCCAATAATTT  850

seq1  AAAAAAATTAAGGGGTTGGACTGGTTATTGGTTGACCATCCCCTAGTCTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAATTAAGGGGTTGGACTGGTTATTGGTTGACCATCCCCTAGTCTC  900

seq1  TGTTTCATCCCCTGTCCTTACATTTTTTGTAGACAGATAAATTTTGGGTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCATCCCCTGTCCTTACATTTTTTGTAGACAGATAAATTTTGGGTA  950

seq1  GAAGAGTTTGTGGATGGGTTGGTGTTCCTATCGCTCCCCTGGGATTCTTG  1000
      ||||||||||||||||||||||||||| ||||||| ||||||||||||||
seq2  GAAGAGTTTGTGGATGGGTTGGTGTTCTTATCGCT-CCCTGGGATTCTTG  999

seq1  CCTGGCTACAGGAGGTGGCCTCTTCAGGTTCCACATACTCAATGCTTTCA  1050
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CCTGGCTACAGGAGGTGGCCTCTTCAGGTT-CACATACTCAATGCTTTCA  1048

seq1  GTCACAGCTAAGGTCACCACAATTGATTC-TTGGGAGCCTCCCTTATCC  1098
      ||||||||||| ||||||| ||||||||| |||||||||||||||||||
seq2  GTCACAGCTAA-GTCACCAAAATTGATTCTTTGGGAGCCTCCCTTATCC  1096

seq1: chrX_137892130_137893309
seq2: B6Ng01-224K19.g_66_1239 (reverse)

seq1  TGTAT-GAAATTTTCTAAAAAAATAAAACCCTGACCTTATTACTTAATGA  49
      ||||| |||||||||| | ||     || ||||||| || ||||| ||||
seq2  TGTATAGAAATTTTCTTACAA---GTAAGCCTGACCATAATACTT-ATGA  46

seq1  ATATAATAAAAGAC-TCTGTGAGAAAATGTGA--AAGAGAGCGCCATTAC  96
      |||||||||||||| || ||||||||||||||  | ||| |||||| || 
seq2  ATATAATAAAAGACTTCCGTGAGAAAATGTGAGGAGGAG-GCGCCAATA-  94

seq1  CACA-CACATGTGATGAACAAAACTGCCATTGCACTGATGGCCTTGTGAT  145
      |||| |||||||||   ||||||||| |||||||||||||  ||||||||
seq2  CACACCACATGTGAATGACAAAACTG-CATTGCACTGATG--CTTGTGAT  141

seq1  TC-TACATGAATAACGCCACTTTCAGTGTGAAGAGTTACAAGATCAACTG  194
      || |||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TCTTACATGAATAACGCCACTTTCAGTGTGAAGAGTTACAAGATCAACT-  190

seq1  GCACCAGAGGATGAGTCTTGTAAAATATTAGGGCAATATTCAAATGATTT  244
      ||||||||||||||||| ||||||||| ||||||||||||| ||||||||
seq2  GCACCAGAGGATGAGTC-TGTAAAATA-TAGGGCAATATTC-AATGATTT  237

seq1  CCTTGTGACATGTTTTTGACAGGTCCCTAGCCTACAAGTTATAAA-CCAT  293
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CCTTGTGACATGTTTTTGACAGGTCCCTAGCCTACAAGTTATAAACCCAT  287

seq1  ATAAAACTCAAATTCCTCGTCTACATCCTGAGTAAGACACACTGACTGGT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAACTCAAATTCCTCGTCTACATCCTGAGTAAGACACACTGACTGGT  337

seq1  TCTTACCTGAAATGTTTAGCAAAAGAAGTATTTATGCTTTATTTTAAGCG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACCTGAAATGTTTAGCAAAAGAAGTATTTATGCTTTATTTTAAGCG  387

seq1  GGTGACACGGAATATTTATATGCATATAATGAAATATTTTAGGGATAGCA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGACACGGAATATTTATATGCATATAATGAAATATTTTAGGGATAGCA  437

seq1  CTCAAGTCTAAACACCAAGCTCATGTGTCATTCATATACTTCCTAAACCC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGTCTAAACACCAAGCTCATGTGTCATTCATATACTTCCTAAACCC  487

seq1  ATAACCTAAAGGTAATTTCATTAATAATTTTATATATGAAACAAAAGTTT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCTAAAGGTAATTTCATTAATAATTTTATATATGAAACAAAAGTTT  537

seq1  CATAGTTTAGAATTTTGTCCTCATGGGTTCATGCTGGCACACAAAATACT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTTTAGAATTTTGTCCTCATGGGTTCATGCTGGCACACAAAATACT  587

seq1  TTAGGTTTTGGAGCACTTTAGATACTGGATTTTGGATTGGAGTTGCTCAA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTTTTGGAGCACTTTAGATACTGGATTTTGGATTGGAGTTGCTCAA  637

seq1  ACTATTTCTATAGGTATTCTGGACCACATTTGTCATGTGTTCTAACAAGA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTTCTATAGGTATTCTGGACCACATTTGTCATGTGTTCTAACAAGA  687

seq1  ATCTTGTGCCTGTGTAATGGAATGTTATAATTGCGATGTCCCCTCATCTA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGTGCCTGTGTAATGGAATGTTATAATTGCGATGTCCCCTCATCTA  737

seq1  CGATATTTAGGAGTAGCCTATTCAGCTGGGACCTTTTATTAAGCCATCAA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATATTTAGGAGTAGCCTATTCAGCTGGGACCTTTTATTAAGCCATCAA  787

seq1  GAAACAATCTGGTTAAGGTGGTGGCATCTTTGAAGGACTTCATGATATAT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAATCTGGTTAAGGTGGTGGCATCTTTGAAGGACTTCATGATATAT  837

seq1  ACAACAGCCTGTCACACCCAGTGTAACTCCTAATTGACACAACAAGACAG  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAGCCTGTCACACCCAGTGTAACTCCTAATTGACACAACAAGACAG  887

seq1  TACAATGATGCTTACATGATGTTTTCAAAAGGCCACCAACTCTATTTACA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATGATGCTTACATGATGTTTTCAAAAGGCCACCAACTCTATTTACA  937

seq1  AGTTTTACTCCTGGTCATTATCTGACATCCCAACTATTAGCAGAAAACCA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTACTCCTGGTCATTATCTGACATCCCAACTATTAGCAGAAAACCA  987

seq1  ACCTAGAATAAAAGTATATATACAGTAGCTTGTTTTACATTGAAATGCAG  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAGAATAAAAGTATATATACAGTAGCTTGTTTTACATTGAAATGCAG  1037

seq1  GAAAGGTAGCATGAATTCTTTGTTTCAGTCAAGTCAGGCTCCTGTGGCTG  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGTAGCATGAATTCTTTGTTTCAGTCAAGTCAGGCTCCTGTGGCTG  1087

seq1  ACCCACATGGGGCCTGTTATTTGTTTGCTTGGAGAAAGGTTTGTTGAAAT  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACATGGGGCCTGTTATTTGTTTGCTTGGAGAAAGGTTTGTTGAAAT  1137

seq1  AAGAATTCTGGGAATCTAATTTTATGACCTGGAATTC  1180
      |||||||||||||||||||||||||||||||||||||
seq2  AAGAATTCTGGGAATCTAATTTTATGACCTGGAATTC  1174

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Alignment Information