MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-229A13
Chromosome	X (Build37)
Map Location	3,435,337 - 3,436,524
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC385516, LOC434721, LOC668957, LOC100043932, OTTMUSG00000016406, LOC673743, OTTMUSG00000016405
Downstream gene	OTTMUSG00000016411, LOC668961, LOC100042159, LOC100042168, LOC627187, LOC100042185, OTTMUSG00000016407, OTTMUSG00000016437, OTTMUSG00000016420, LOC547057, EG546327, EG668965, LOC546185, LOC100043933, LOC670673
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC385516 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:385516
definition	gene_synonym : Gm1547; Gm654 note : hypothetical LOC385516 pseudo : _no_value

name	LOC434721 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:434721
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 1 EST, 26 Proteins

name	LOC668957 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668957
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins pseudo : _no_value

name	LOC100043932 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043932
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	OTTMUSG00000016406 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668958 MGI:3709280
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 12 ESTs, 14 Proteins

name	LOC673743 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:673743
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	OTTMUSG00000016405 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:630022 MGI:3709282
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 12 ESTs, 15 Proteins

name	OTTMUSG00000016411 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668960 MGI:3709278
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 12 ESTs, 15 Proteins

name	LOC668961 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668961
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 1 EST, 26 Proteins

name	LOC100042159 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042159
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 12 ESTs, 15 Proteins

name	LOC100042168 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042168
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 12 ESTs, 15 Proteins

name	LOC627187 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:627187
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 Proteins pseudo : _no_value

name	LOC100042185 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042185
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs

name	OTTMUSG00000016407 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:627264 MGI:3709183
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 11 ESTs, 10 Proteins

name	OTTMUSG00000016437 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668964 MGI:3709272
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 12 ESTs, 15 Proteins

name	OTTMUSG00000016420 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668963 MGI:3709274
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 12 ESTs, 15 Proteins

name	LOC547057 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:547057
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 Proteins pseudo : _no_value

name	EG546327 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:546327 MGI:3704140
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST pseudo : _no_value

name	EG668965 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668965 MGI:3646752
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs

name	LOC546185 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:546185
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 14 Proteins

name	LOC100043933 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043933
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC670673 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:670673
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 Proteins pseudo : _no_value

name	LOC434721 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94406944 GeneID:434721
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 1 EST, 26 Proteins product : similar to 4930408F14Rik protein transcript_id : XM_486606.3

name	OTTMUSG00000016406 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94406945 GeneID:668958 MGI:3709280
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 12 ESTs, 14 Proteins product : predicted gene, OTTMUSG00000016406 transcript_id : XM_001006590.1

name	OTTMUSG00000016405 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94406948 GeneID:630022 MGI:3709282
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 12 ESTs, 15 Proteins product : predicted gene, OTTMUSG00000016405 transcript_id : XM_895197.2

name	OTTMUSG00000016411 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94406949 GeneID:668960 MGI:3709278
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 12 ESTs, 15 Proteins product : predicted gene, OTTMUSG00000016411 transcript_id : XM_001006594.1

name	LOC668961 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94406951 GeneID:668961
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 1 EST, 26 Proteins product : similar to 4930408F14Rik protein transcript_id : XM_001006595.1

name	LOC100042159 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270905 GeneID:100042159
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 12 ESTs, 15 Proteins product : similar to mgclh transcript_id : XM_001474533.1

name	LOC100042168 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270907 GeneID:100042168
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 12 ESTs, 15 Proteins product : similar to mgclh transcript_id : XM_001474553.1

name	LOC100042185 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270909 GeneID:100042185
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs product : similar to 4930408F14Rik protein transcript_id : XM_001474570.1

name	OTTMUSG00000016407 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94406954 GeneID:627264 MGI:3709183
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 11 ESTs, 10 Proteins product : predicted gene, OTTMUSG00000016407 transcript_id : XM_891923.2

name	OTTMUSG00000016437 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94406957 GeneID:668964 MGI:3709272
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 12 ESTs, 15 Proteins product : predicted gene, OTTMUSG00000016437 transcript_id : XM_001006598.1

name	OTTMUSG00000016420 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94406955 GeneID:668963 MGI:3709274
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 12 ESTs, 15 Proteins product : predicted gene, OTTMUSG00000016420 transcript_id : XM_001006597.1

name	EG668965 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149270911 GeneID:668965 MGI:3646752
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs product : predicted gene, EG668965 transcript_id : XM_001474644.1

name	LOC434721 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:51771877 GeneID:434721
definition	codon_start : 1 product : similar to 4930408F14Rik protein protein_id : XP_486606.1

name	OTTMUSG00000016406 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94406946 GeneID:668958 MGI:3709280
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001006590.1

name	OTTMUSG00000016405 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83006307 GeneID:630022 MGI:3709282
definition	codon_start : 1 product : hypothetical protein protein_id : XP_900290.1

name	OTTMUSG00000016411 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94406950 GeneID:668960 MGI:3709278
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001006594.1

name	LOC668961 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94406952 GeneID:668961
definition	codon_start : 1 product : similar to 4930408F14Rik protein protein_id : XP_001006595.1

name	LOC100042159 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270906 GeneID:100042159
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474583.1

name	LOC100042168 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270908 GeneID:100042168
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474603.1

name	LOC100042185 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270910 GeneID:100042185
definition	codon_start : 1 product : similar to 4930408F14Rik protein protein_id : XP_001474620.1

name	OTTMUSG00000016407 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82999652 GeneID:627264 MGI:3709183
definition	codon_start : 1 product : hypothetical protein protein_id : XP_897016.1

name	OTTMUSG00000016437 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94406958 GeneID:668964 MGI:3709272
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001006598.1

name	OTTMUSG00000016420 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94406956 GeneID:668963 MGI:3709274
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001006597.1

name	EG668965 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149270912 GeneID:668965 MGI:3646752
definition	codon_start : 1 product : similar to 4930408F14Rik protein protein_id : XP_001474694.1

name	LOC668957 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668957
definition	number : 1 pseudo : _no_value

name	LOC668957 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668957
definition	number : 2 pseudo : _no_value

name	LOC668957 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668957
definition	number : 3 pseudo : _no_value

name	LOC100043932 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043932
definition	number : 2 pseudo : _no_value

name	LOC100043932 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043932
definition	number : 1 pseudo : _no_value

name	LOC673743 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:673743
definition	number : 3 pseudo : _no_value

name	LOC673743 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:673743
definition	number : 2 pseudo : _no_value

name	LOC673743 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:673743
definition	number : 1 pseudo : _no_value

name	LOC627187 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:627187
definition	number : 2 pseudo : _no_value

name	LOC627187 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:627187
definition	number : 1 pseudo : _no_value

name	LOC547057 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:547057
definition	number : 2 pseudo : _no_value

name	LOC547057 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:547057
definition	number : 1 pseudo : _no_value

name	LOC100043933 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043933
definition	number : 1 pseudo : _no_value

name	LOC100043933 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043933
definition	number : 2 pseudo : _no_value

name	LOC670673 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:670673
definition	number : 3 pseudo : _no_value

name	LOC670673 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:670673
definition	number : 2 pseudo : _no_value

name	EG546327 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149270924 GeneID:546327 MGI:3704140
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : predicted gene, EG546327 pseudo : _no_value transcript_id : XR_035060.1

name	LOC546185 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149270913 GeneID:546185
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 14 Proteins product : similar to Germ cell-less protein-like 2 (mGclh) transcript_id : XR_031864.1

clone name	MSMg01-358N14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-352B23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-408A19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-495F17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-167D05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-215I04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-504B09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-513N02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-451C12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-491C03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-528G01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-531F12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-542K06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-141K01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-351M15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-416O08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-507L22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-418B13
singlet/doublet	singlet
plural/unique	plural

clone name	B6Ng01-197A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244C11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256M02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-079M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303N04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-296A19
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-229A13.b	B6Ng01-229A13.g
ACC	GA042290	GA042291
length	1,000	1,144
definition	B6Ng01-229A13.b	B6Ng01-229A13.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattccaactctaacaataaaaataataggaagcaacaaatacttttcc ttaatattccttaatatcaatggattcaattacccaataaaaagacatag actaacagactagctacacaaacaggaccaaacattttgctgcttacaga aaacccatctcacggaaaaagacagacactaccccagaatgaaaggctgg aaaacaaatttccaagcaaatggtctgaagaaacaagctggaatatccac tctaatatcgaataaaatcgacttccaacccaaagttatcaaaaaagcaa ggaggggcatctcattctcatcaaagctaaagtcttccatgggaaactct caattctgaatatctatggtccaaatgcaaaggcagccacactcattaaa gaaacttttgtaaagctcaaagcacacattgcacctcacacaataatact gggagacttcaacacaccactttcattaatggacaaattatgtaaacaga aactaaacagggacaccgttaaactaacagaagttatgaaagaaatggat tcaacagatttctacagaacattttatcctaaacaaaaggatataccttc ttctcagcacctcatggtaccttcaccaaaattgaccatataattcatca caaaacaggcctcaacagatacaaaaatatttaaattgtcccatgcatca catcagatcaccatggactaaggctgatcttaaataacaacataaataat agaaaaccaacattcacgtagaaactaaacaacactcttctcaatgatac cttggtcaaggactgaaaaaagaaagaatttaaagacttcttagagttta atgaaaatgaagccaccacatacccaaacttatgggacacaatgaaagca tttctaagaggaaaactcatagctctgagtgcctccaaaagaaactagac agagcacacactagcagcttgacaacacacctaaaagctatagaacaaaa	gaattcattgctaaccctagtgtccaaagcacatgacaacagtaaagatc ctatcttgcccctcccaccatatgattaacatcattaataaattttctgc tgtctcaagcaaattcattggaggttaaataccttaacattcagctggat ggtgatggctcatgcctttaatcccagaactcaggaggcaaatctaggca tatctctgagtttgaggtcagcctggtctatatagtatgtctcaggacag ccagggctacagggagagatcctgtcttggaaaacaaataaaataataca aatataaatataaacaaaacaatgcaacattcttaactggaaagtatttg gctatagatgctgaatgaaagccttttctaaagctaaactatatgctgtc agcaattggtaatttatctccagaatacaataataagaaatactgaaact atgtgtacttccgtctgatagcacataagtcattaatataccatacagaa tcaaaaataattgtcagggtattccttctaaataaaataataataataaa aataattccttctaaaggctcggaataatttgtcctgtgtgtcctttgct tccacttttttttttcttcaacacaaccaaagtaattttcacgaagaaaa tagttataaattggagccttggaccctttgtttaatgccttaaatacccc ttgagtaggatgggctcttttgtgaaatacttgtgatcattctattgagc atagatgcctaaaatctctagctaccaagctcaatggaggcaaaggctac tggagacatgtgggtcttgtgtctcatttggagtgaggataaacatgatg ttagttatacacacattaaattatatttccacatcagagtgcatcctaca tgtactaagaattgttgcctgcatttcttggcccatgaggaaagtgtttt tagacactaattcttgattcttcccctcccatcccttttggtgttcacaa gagaaaacagaatctcagaaagaaaaatcaatactttctctatgctatga gtactgtagagataagctttatttctatgctaaaatctaaaccgagctga aactgaggaatctcaatcatccgcatggcctgaactgttgtaga
quality values	Open. Hide. 58 26 18 32 58 58 29 20 54 58 58 58 54 62 62 32 20 62 62 62 46 62 62 62 56 62 62 62 54 62 62 62 56 56 56 38 32 50 22 32 46 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 54 54 62 59 59 59 62 54 56 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 59 59 54 62 62 62 62 62 62 62 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 43 62 62 62 62 62 62 62 62 62 54 45 47 48 62 62 62 52 62 62 62 62 52 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 52 62 58 58 58 58 58 58 58 58 54 58 58 58 54 58 58 58 58 58 58 58 58 58 58 58 58 58 54 42 54 52 58 58 58 58 54 52 58 58 58 58 54 58 58 54 54 58 58 52 58 54 54 54 58 58 58 58 52 58 58 58 47 58 58 54 54 58 58 46 58 58 46 52 58 52 58 58 58 58 51 58 50 51 58 58 49 50 58 58 58 48 49 51 58 58 53 50 58 58 51 41 58 58 44 45 58 47 41 40 51 51 51 58 58 51 58 58 54 53 51 49 40 50 51 50 51 58 58 51 49 52 58 58 47 40 37 58 51 58 53 37 54 47 40 58 58 52 50 48 58 38 40 50 46 51 46 51 52 50 47 51 53 42 53 53 52 50 53 58 58 58 49 52 50 58 27 50 53 50 41 36 46 41 32 53 39 42 50 39 58 58 49 33 41 42 39 58 40 40 58 50 52 58 58 39 54 54 50 37 42 53 52 32 52 42 42 53 38 53 53 52 32 32 30 39 39 41 44 32 42 54 51 32 30 45 51 29 19 46 17 53 43 49 25 49 52 41 23 54 47 39 23 38 30 18 35 37 24 52 32 54 44 52 46 46 40 37 35 53 54 54 24 19 52 32 37 45 33 45 53 43 32 33 41 45 40 33 53 53 32 32 31 26 46 32 24 12 46 35 31 34 42 52 33 40 32 32 32 31 33 32 52 40 29 25 23 33 28 28 41 51 31 32 26 18 25 30 31 23 31 45 31 51 51 51 51 37 31 41 51 33 24 31 38 31 51 38 32 51 36 32 31 26 42 42 37 21 45 32 20 41 24 24 46 36 32 31 31 31 38 48 46 26 31 34 24 35 30 30 32 16 29 28 22 31 28 41 29 31 46 24 21 46 27 30 32 36 32 34 42 47 23 30 18 17 18 25 27 35 43 33 48 37 26 32 24 25 48 31 31 31 23 28 23 41 30 31 35 48 46 30 24 36 34 28 31 25 24 31 42 29 31 32 37 9 28 32 21 26 31 16 16 31 44 44 44 18 32 47 21 25 27 32 33 26 21 18 24 36 16 31 26 21 23 19 13 32 32 34 19 31 22 22 33 29 19 31 15 17 6 15 20 18 31 13 7 30 32 21 48 43 30 20 32 34 24 23 16 17 16 30 18 9 43 37 30	Open. Hide. 62 47 56 47 62 42 42 62 62 62 35 39 24 25 36 38 36 35 34 34 29 49 62 62 59 43 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 59 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 59 62 59 59 59 62 62 62 59 62 59 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 46 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 54 58 54 58 54 54 51 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 45 54 58 58 58 58 58 58 58 58 58 52 58 58 58 54 58 54 54 58 58 58 52 52 52 58 58 58 58 52 41 58 58 58 58 58 58 54 54 58 58 58 58 58 58 45 54 54 58 58 58 47 54 58 58 58 47 58 58 58 58 52 51 58 51 58 58 58 58 58 58 52 58 58 58 50 58 32 51 58 44 54 58 58 47 49 50 50 58 58 58 52 58 58 51 58 53 58 54 58 53 51 58 51 58 58 58 58 58 53 53 46 50 49 58 58 58 58 58 58 58 58 58 51 51 51 49 47 28 53 52 46 52 41 36 50 48 42 58 51 50 41 52 40 35 58 58 42 43 32 53 41 58 51 30 58 58 58 39 41 50 40 50 50 41 52 50 58 32 52 58 51 33 58 32 58 49 51 53 50 41 13 17 54 51 50 54 40 53 39 54 35 30 38 40 53 32 49 46 49 39 54 41 52 32 52 54 54 53 53 52 51 39 32 42 41 12 49 38 26 52 54 49 37 42 45 31 54 54 38 46 37 41 47 54 45 34 37 42 33 44 51 37 38 30 29 40 35 40 45 53 34 39 26 33 42 42 35 45 37 32 32 29 32 30 34 32 38 32 32 52 51 32 32 32 40 52 36 40 35 37 31 32 34 45 30 39 32 40 45 39 32 34 37 53 35 42 13 41 35 36 51 31 23 41 18 31 31 31 36 29 26 42 25 30 20 25 30 31 31 32 51 31 34 36 35 31 45 26 31 33 36 38 32 31 20 47 31 31 46 31 24 32 34 25 21 24 30 22 28 46 32 31 23 31 31 33 21 42 29 31 38 15 11 30 20 30 22 43 28 31 19 32 24 33 28 22 48 39 28 31 32 32 19 25 48 33 29 18 13 28 23 43 34 29 18 33 10 18 19 20 27 31 29 31 26 21 26 17 24 31 32 16 15 15 22 21 9 24 38 13 25 32 14 13 27 25 32 31 28 24 22 36 48 32 25 18 15 13 16 4 29 22 24 32 34 31 17 11 29 48 24 19 14 17 9 48 48 48 32 18 16 19 4 21 32 27 17 25 17 21 23 17 6 19 34 21 31 21 17 16 24 38 34 19 4 3 40 23 24 28 14 34 18 20 47 47 28 14 21 21 5 5 10 18 28 17 13 18 15 13 12 7 34 21 14 15 11 6 7 21 12 18 13 24 8 14 14 47 19 11 7 34 47 34 21 19 14 16 15 10 15 21 17 28 13 18 4 12 4 20 5 21 11 13 9 3 5 3 3 5 13 18 16 14 3 5 13 9 7 22 5 3 3 3 4 18 15 8 13 10 17 17 8 5 3 1 3 13 15 22 30 17 17 6 6 4 3 1 5 7 4 5 22 8 18 13 7 16 26 5 3 2 3 6 2 3 4 5 6 5 6 4 5 17 19 6 4 16 5 13 10 4 3 5 9 14 9 12 8 11 6 4 4 1 5 7 9 5 16 7 7 7

Alignment Information

BAC End 1

BAC End 2

seq1: chrX_3435337_3436524
seq2: B6Ng01-229A13.g_65_1208 (reverse)

seq1  TCTACAACAGCTCAGGCCATAGCAGGAATGAATTTGATGATCTCCTTCAA  50
      |||||||||| ||||||||| ||  | ||||  |||| ||| ||| ||| 
seq2  TCTACAACAGTTCAGGCCAT-GC--GGATGA--TTGA-GAT-TCC-TCA-  41

seq1  GGTTTCAGCTTCTGTTATAGATTTTTTAGCACTTAGGAAAATAAAAGCCT  100
       |||||||| || ||| ||||  ||||||||  |||  |||| |||||  
seq2  -GTTTCAGC-TCGGTT-TAGA--TTTTAGCA--TAG--AAAT-AAAGC--  79

seq1  TTATTCTTCCTACCAGTACCTTCATTAAGCATTAGAGAAAGTATTTGATT  150
      ||| |||  ||| ||||||  ||||  |||| ||||||||||| ||||||
seq2  TTA-TCT--CTA-CAGTAC--TCAT--AGCA-TAGAGAAAGTA-TTGATT  119

seq1  TTTCCTTTTCCTGAGATTCTGTTTTCTCTTTGTTGAACCAACCAAAAAGG  200
      ||||   || ||||||||||||||||||||   |||||  ||| ||||||
seq2  TTTC---TTTCTGAGATTCTGTTTTCTCTT--GTGAAC--ACC-AAAAGG  161

seq1  GATGGGAAGGGGAAGAAATCAAAGAATTAGTGTTCTACAAACACTTTCCT  250
      |||||| |||||||| |||| ||||||||||| |||| ||||||||||||
seq2  GATGGG-AGGGGAAG-AATC-AAGAATTAGTG-TCTAAAAACACTTTCCT  207

seq1  CATGGGCCAAGAAATGCAGGCAACAATTCTTAGTACATGTAGGATGCACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGCCAAGAAATGCAGGCAACAATTCTTAGTACATGTAGGATGCACT  257

seq1  CTGATGTGGAAATATAATTTAATGTGTGTATAACTAACATCATGTTGATC  350
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CTGATGTGGAAATATAATTTAATGTGTGTATAACTAACATCATGTTTATC  307

seq1  CTCACTCCAAATGAGACACAAGACCCACATGTCTCCAGTAGCCTTTGCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTCCAAATGAGACACAAGACCCACATGTCTCCAGTAGCCTTTGCCT  357

seq1  CCATTGAGCTTGGTAGCTAGAGATTTTAGGCATCTATGCTCAATAGAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGAGCTTGGTAGCTAGAGATTTTAGGCATCTATGCTCAATAGAATG  407

seq1  ATCACAAGTATTTCACAAAACAGCCCATCCTACTCAAGGGGTATTTAAGG  500
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  ATCACAAGTATTTCACAAAAGAGCCCATCCTACTCAAGGGGTATTTAAGG  457

seq1  CATTAAACAAAGGGTCCAAGGCTCCAATTTATAACTATTTTCTTCGTGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAACAAAGGGTCCAAGGCTCCAATTTATAACTATTTTCTTCGTGAA  507

seq1  AAGTACTTTGGTTGTGTTGAAGAAAAAAAAAAAGTGGAAGCAAAGGACAC  600
      || ||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AATTACTTTGGTTGTGTTGAAG-AAAAAAAAAAGTGGAAGCAAAGGACAC  556

seq1  ACAGGACAAATTATTCCGAGCCTTTAGAAGGAATTATTTTTATTATTATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGACAAATTATTCCGAGCCTTTAGAAGGAATTATTTTTATTATTATT  606

seq1  ATTTTATTTAGAAGGAATACCCTGACAATTATTTTTGATTCTGTATGGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATTTAGAAGGAATACCCTGACAATTATTTTTGATTCTGTATGGTA  656

seq1  TATTAATGACTTATGTGCTATCAGACGGAAGTACACATAGTTTCAGTATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAATGACTTATGTGCTATCAGACGGAAGTACACATAGTTTCAGTATT  706

seq1  TCTTATTATTGTATTGTGGAGATAAATTACCAATTGCTGACAGCATATAG  800
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TCTTATTATTGTATTCTGGAGATAAATTACCAATTGCTGACAGCATATAG  756

seq1  TTTAGCTTTAGAAAAGGCTTTCATTCAGCATCTATAGCCAAATACTTTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCTTTAGAAAAGGCTTTCATTCAGCATCTATAGCCAAATACTTTCC  806

seq1  AGTTAAGAATGTTGCATTGTTTTGTTTATATTTATATTTGTATTATTTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAAGAATGTTGCATTGTTTTGTTTATATTTATATTTGTATTATTTTA  856

seq1  TTTGTTTTCCAAGACAGGATCTCTCCCTGTATCCCTGGCTGTCCTGAGAC  950
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TTTGTTTTCCAAGACAGGATCTCTCCCTGTAGCCCTGGCTGTCCTGAGAC  906

seq1  ATACTATATAGACCAGGCTGACCTCAAACTCAGAGATATGCCTAGATTTG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTATATAGACCAGGCTGACCTCAAACTCAGAGATATGCCTAGATTTG  956

seq1  CCTCCTGAGTTCTGGGATTAAAGGCATGAGCCATCACCATCCAGCTGAAT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTGAGTTCTGGGATTAAAGGCATGAGCCATCACCATCCAGCTGAAT  1006

seq1  GTTAAGGTATTTAACCTCCAATGAATTTGCTTGAGACAGCAGAAAATTTA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAGGTATTTAACCTCCAATGAATTTGCTTGAGACAGCAGAAAATTTA  1056

seq1  TTAATGACGTTAATCATATGGTGGGAGGGGCAAGATAGGATCTTTACTGT  1150
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGATGTTAATCATATGGTGGGAGGGGCAAGATAGGATCTTTACTGT  1106

seq1  TGTCATGTGCTTTGGACACTAGGGTTAGCAATGAATTC  1188
      ||||||||||||||||||||||||||||||||||||||
seq2  TGTCATGTGCTTTGGACACTAGGGTTAGCAATGAATTC  1144

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information