BAC Information

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BAC

Clone NameB6Ng01-234B08
ChromosomeX (Build37)
Map Location 28,190,954 - 28,191,851
singlet/doubletsinglet
Overlap geneLOC100039364
Upstream geneLOC100039240, LOC100039248, LOC100039073, EG664890, LOC664898, LOC22526, EG664906, LOC664917, LOC100039324, LOC100039334, LOC100039096, EG664923
Downstream geneLOC100039377, LOC100039386, LOC100039127, EG664944, LOC100039423, LOC100039145, LOC664951, LOC100042071, LOC664958, LOC664964, LOC100042087, LOC100039171, LOC100042103, LOC100042109
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-234B08.bB6Ng01-234B08.g
ACCGA045944GA045945
length1,043994
definitionB6Ng01-234B08.b B6Ng01-234B08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggaagagaagcacctgtaaaaatg
ttcaaaatccttaaccatcagggaaatgcaaatcaaaacaacactgagat
tccacttcactccagtcagaatggctaagatcaaaaaatcaggtggcagc
agatgctggcgaggatgtggagaaaggggaacactcctccatagttggtg
ggattgcaagcttgtacaacctctctggaaatcagtctggcggttcctca
gaaaattggacatattactaccggaggatcccacaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaagaacacattctccactat
gttcatagcagccttatttataatagccagaaagtggaaataacacagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
aaatactactcagctatttacaaaaatgaatttatgaaattcctaggcaa
atggatggacctggagggtatcatcctgagtgaagtaagccaatcacaaa
ggaactcgcacaatatgtactcactgataagtggatattagcccagaaac
ttaggatacccaatatataagatacaacttgccaaacgcatgaatttcaa
gaagaacgaagaccaaagtgtggacactctaccctttctttaaaatggga
acaaaacacccatagaaggagttacacagacaaaatttggagctgtgacg
aaaggatggaccatctagtgatttccatatgcagggatccatcccataat
cagcttccaaatgctgacaccattgcatacactagcaagattttgctgaa
aggacccagatatagctctctcttatgaaagtatgccggggcctagcaaa
cacagaagtggatgatcacagtcagctattggatgggtcacacggcccct
tattgagaagctagagaaattacccaaggagaaaaagggaactgcaaccc
tatatgtggaacaacaatatgaactaaccagtacccgggagct
gaattccatatgtatgttatacaacctgaagcatcatactagatagatag
atgttgggtgctatgcaaaatgaacagcaaaaccattagaacgtatggaa
tgttgcccaggagttagcccaagcaaggtggctcctgagagaggcagaac
cccgaggaatgtgtcctgaggacttcatgctgttgtggagttttgttctg
cttgctatgctcaccatcacatcccttataatctgagatgtataaaaact
ctaagggggagggggttccagccccttactggccaatgtcattgtcaccc
aaagtgtcagttagattgaacattttcaagcattgctgctggagcagatt
aataattaaatcagtatacttggaaagaattactatgaaaaaacatgctt
atttatttatttatttattttgcaaaatctgagatggtgatcaggtgatg
attaattccttactgactttttcccctcagtttccttatatgatttaata
aaaacatggttaatgaatacatgtgcactctgaggattcaaagtagaaag
agctacttgttttttgtataaaattttgttctgtggttctattaagattt
ttatagagcccttccagtcctgccagcaccagggtagcttgggcacagag
tcggctgacacctgcaagctacccacaagacccgccatgggaccttaaga
cctctggtgagtggaacacagcgtctgctccaatccactcatgagggacc
tgagactgcattaattagggaagcagaaaatccggcctgatcaggggcac
aagtcacttctgttccccgccagcaccggggtagctagggcccagagtag
gctgacacccgtaaggtaaacacaggacctgccacgggatattagaactc
tgtgagtagatcacaacttctgccaggaggcagtttgaacaccagatatc
tggaaaacttccctgcaagaggagagcctacctgcagaaagtat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_28190954_28191851
seq2: B6Ng01-234B08.g_68_964

seq1  GAATTCCATATGTATGTTATACAACCTGAAGCATCATACTAGATAGATAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATATGTATGTTATACAACCTGAAGCATCATACTAGATAGATAG  50

seq1  ATGTTGGGTGCTATGCAAAATGAACAGCAAAACCATTAGAACGTATGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGGGTGCTATGCAAAATGAACAGCAAAACCATTAGAACGTATGGAA  100

seq1  TGTTGCCCAGGAGTTAGCCCAAGCAAGGTGGCTCCTGAGAGAGGCAGAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCCCAGGAGTTAGCCCAAGCAAGGTGGCTCCTGAGAGAGGCAGAAC  150

seq1  CCCGAGGAATGTGTCCTGAGGACTTCATGCTGTTGTGGAGTTTTGTTCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGAGGAATGTGTCCTGAGGACTTCATGCTGTTGTGGAGTTTTGTTCTG  200

seq1  CTTGCTATGCTCACCATCACATCCCTTATAATCTGAGATGTATAAAAACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTATGCTCACCATCACATCCCTTATAATCTGAGATGTATAAAAACT  250

seq1  CTAAGGGGGAGGGGGTTCCAGCCCCTTACTGGCCAATGTCATTGTCACCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGGGGAGGGGGTTCCAGCCCCTTACTGGCCAATGTCATTGTCACCC  300

seq1  AAAGTGTCAGTTAGATTGAACATTTTCAAGCATTGCTGCTGGAGCAGATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGTCAGTTAGATTGAACATTTTCAAGCATTGCTGCTGGAGCAGATT  350

seq1  AATAATTAAATCAGTATACTTGGAAAGAATTACTATGAAAAAACATGCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATTAAATCAGTATACTTGGAAAGAATTACTATGAAAAAACATGCTT  400

seq1  ATTTATTTATTTATTTATTTTGCAAAATCTGAGATGGTGATCAGGTGATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTTATTTATTTATTTTGCAAAATCTGAGATGGTGATCAGGTGATG  450

seq1  ATTAATTCCTTACTGACTTTTTCCCCTCAGTTTCCTTATATGATTTAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTCCTTACTGACTTTTTCCCCTCAGTTTCCTTATATGATTTAATA  500

seq1  AAAACATGGTTAATGAATACATGTGCACTCTGAGGATTCAAAGTAGAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACATGGTTAATGAATACATGTGCACTCTGAGGATTCAAAGTAGAAAG  550

seq1  AGCTACTTGTTTTTTGTATAAAATTTTGTTCTGTGGTTCTATTAAGATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTACTTGTTTTTTGTATAAAATTTTGTTCTGTGGTTCTATTAAGATTT  600

seq1  TTATAGAGCCCTTCCAGTCCTGCCAGCACCAGGGTAGCTTGGGCACAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGAGCCCTTCCAGTCCTGCCAGCACCAGGGTAGCTTGGGCACAGAG  650

seq1  TCGGCTGACACCTGCAAGCTACCCACAAGACCCGCCATGGGACCTTAAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGCTGACACCTGCAAGCTACCCACAAGACCCGCCATGGGACCTTAAGA  700

seq1  CCTCTGGTGAGTGGAACACAGCGTCTGCTCCAATCCACTCATGAGGGACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGGTGAGTGGAACACAGCGTCTGCTCCAATCCACTCATGAGGGACC  750

seq1  TGAGACTGCATTAATTAGGGAAGCAGAAAATCCGGCCTGATCAGGGGCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACTGCATTAATTAGGGAAGCAGAAAATCCGGCCTGATCAGGGGCAC  800

seq1  AAGTCACTTCTGTTCCCCGCCAGCACCGGGGTAGCTAGGGCCCAGAGTAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCACTTCTGTTCCCCGCCAGCACCGGGGTAGCTAGGGCCCAGAGTAG  850

seq1  GCTGACACCCGTAAGGTAAACACAGGACCTGCCACGGGATATTTAGAA  898
      ||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GCTGACACCCGTAAGGTAAACACAGGACCTGCCACGGGATA-TTAGAA  897