BAC Information

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BAC

Clone NameB6Ng01-236E13
ChromosomeX (Build37)
Map Location 78,309,656 - 78,310,044
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC654474, LOC629153, LOC546338, LOC100042229, LOC667776, EG629182
Downstream geneTmem47, LOC100041462, LOC100041474, 4930595M18Rik, EG667799
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-236E13.bB6Ng01-236E13.g
ACCGA047540GA047541
length1,208383
definitionB6Ng01-236E13.b B6Ng01-236E13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgttcatgtggctatcttttttttaggtttgttgaaagattact
ttcttgctttttctagggcatagtttccctccttgtgttgaagttttcct
ttattaacctttgaaggactggatatgtggaaatatattgtgtaaatttg
tttttgtcattgaatatctgtttttctccatctatagttattgagagttt
tgctggatatagtaccctgggctggcatttgtgttctcctaggatctgta
tgacatctgtccaggatcttttggctcctgatctctttcctaggttttct
atctccacatttgtctccctttgtgattctttattgtttctacctccatg
tttagatcctggatggttttgttcaattccttcacctatttagttgtgtt
ttcctgcaattctttaagggatttttgtgtttcctctttaagggtttcta
ctggtttacctgtgttctcctgtatttctttacagaatttatctctgtcc
ttcttaaagtcttcgatcatcatcatcatgagaagtatattcagatccat
atcttgcttttctgttgtgatggtatatccaggacttgttatggtgggag
aattgggttctgatgatgccaagtaaccttggtttctgttgcttctattc
ttatacttgcttctcatcatctgattatcccaagtgctccttgccctcac
tacacctgactggagcctgtccttcctgtaactctagttgagtcagattt
cctcagagtccagctttctctgtgatcctgtatttctgttatcctgtgat
cttgagattctgggaatgtcagagttcctgagagtcaatcttcctctgag
accttgaattactggtgtgaccaagctcctgggatcctgggattctaaga
tactgtgcatgctagagtgtctcattggagattcctctggtgaccatggg
attatctgctgagtttgtgcccaaggtagactggcactgcttctccaagt
tctttatgattgcataaaagaatttaataatttctccctgatcttctgaa
actactcgagaaaaatgtggttaacacttaaatgcagccttaagacttgt
tagaactcatgcctcagaatagaccaatactgcattggactcatgaattg
gaaccctcacgctagactgatgactggaaagaagccttatattatatgat
attactca

aaggttatcatcaactacaaaaggagactgaggtaagtcaggaatacatg
agaccctgtatcaaaactaactaactaactaactaactacttaaataact
aactaactaaatgaaactactttacctatgttacgttgataagtagtgtt
gtattctttctcataaattaacttttgtgatgtaaatattattatatctg
ggaatgtttatcttgcattctagcagaaactgcttcagaagaatcagaaa
attcttttctagaagttgtgaatgtgacggtgctcacgtgcacatgtgta
tttgtgtgtgtgcacgtgtgtgtgcgtgtgcaggtgcaggtgcgtgagtg
agtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_78309656_78310044
seq2: B6Ng01-236E13.g_70_458 (reverse)

seq1  ACACACACACACACACACACACACACACACACTCACTCACGCACCTGCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACACTCACTCACGCACCTGCAC  50

seq1  CTGCACACGCACACACACGTGCACACACACAAATACACATGTGCACGTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCACACGCACACACACGTGCACACACACAAATACACATGTGCACGTGA  100

seq1  GCACCGTCACATTCACAACTTCTAGAAAAGAATTTTCTGATTCTTCTGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCGTCACATTCACAACTTCTAGAAAAGAATTTTCTGATTCTTCTGAA  150

seq1  GCAGTTTCTGCTAGAATGCAAGATAAACATTCCCAGATATAATAATATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTTCTGCTAGAATGCAAGATAAACATTCCCAGATATAATAATATTT  200

seq1  ACATCACAAAAGTTAATTTATGAGAAAGAATACAACACTACTTATCAACG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCACAAAAGTTAATTTATGAGAAAGAATACAACACTACTTATCAACG  250

seq1  TAACATAGGTAAAGTAGTTTCATTTAGTTAGTTAGTTATTTAAGTAGTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATAGGTAAAGTAGTTTCATTTAGTTAGTTAGTTATTTAAGTAGTTA  300

seq1  GTTAGTTAGTTAGTTAGTTTTGATACAGGGTCTCATGTATTCCTGACTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGTTAGTTAGTTAGTTTTGATACAGGGTCTCATGTATTCCTGACTTA  350

seq1  CCTCAGTCTCCTTTTGTAGTTGATGATAACCTTGAATTC  389
      |||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGTCTCCTTTTGTAGTTGATGATAACCTTGAATTC  389


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