BAC Information

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BAC

Clone NameB6Ng01-240A06
ChromosomeX (Build37)
Map Location 125,924,386 - 125,925,489
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040538, LOC100040550, LOC100040562
Downstream geneLOC100040570, LOC669120, Diap2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-240A06.bB6Ng01-240A06.g
ACCGA050291GA050292
length1,1521,116
definitionB6Ng01-240A06.b B6Ng01-240A06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccaaatggcacagaagcacctgaaaaaatg
tttaacatccttaatcatcagggaaatgcaaatcaaaacaacactgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaatgaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactttggaaatcagtctggtggttccgca
gaaaattggacatagtactaccagaggatccagcaatacctcttctgggc
atatatccagaagatgtcccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaggaatgaatttatgaaattcctaggcaa
atggatggacttggagggcatcatcctgagtgaggtaacacaatcacaaa
ggagctcacacaatatgtactcactgataagtggatattagcccaaaaac
ttaggatacccaagatatttgatacaatttgctaaacgcatgaaactcaa
gaagaacgacgaccaaagtgtggacactttgccccttcttagaattggga
acaaaactcccatggaaggagttacagagacaaagtttggagctgtgacg
aaaggatggaccatctagagactgccatatccagggatccatcccacaat
cagcttccaaacgctgacaccattgcatacactagcaagattttgctgaa
agaacccagatatagctgtctcttgtgagactatgccggggcctagcaaa
cacagaaagtggatgctcacagtcagctattggatggataacaggccccc
agtggaggagttagagaaagtacccaggagctaaagggatctgcactcta
tagtggaacaccctatgactaacagtaccccgagctcatgtctctagctg
catatgtatcaaagatgctagtcgcatcactgaaaggaagtcaatgactg
ccaaccttatatgccagttacaggaacccaaggccaaaattggattgttg
ta
gaattcaaggccaggctaggctacatagtgagttttaagctgggcatagt
cagaccctgcctcaagaaaatggaagaggaaagtgagggaaagggggaaa
catagtggggaaagggggtacagagaggggagagtttttgaaatgctttt
cgtgtgctcaaaattaaagctctatataggatggccaaagatctctttcc
ctacattcccaatatgtaaagcatatttgagtgatacatgtcatctagta
tcaatcaaagccttgttacagaggtggaaataatgtaatttaataaagat
taaatgtcttgaaaatggttttccagagcaaaagccaattagaggtttta
agtctgctttatctaacaggaatttcaatataggatattgtgatatgtct
gcttttgtctggctctgttaatatcctatattaaattctgagtttttgtt
ttgtctctcatttgcataataattctaaatgcattaataatttaatattt
ttgcttttccagaatagactctgaccataactagcaccttttacctttta
atgcaatctagaagattttccaagacagactcttacaggggatatttctc
attcaaaccacaacaacagacatagaattatacataaatgaaaagttcac
taacgaggttagtcttagattttctgtcttgtacttttaggaacaattat
tattttcacaaagtttttgttttatcaaaatagctaaaactaaatcactt
tcaaaaagtgcttcagttttgatagactaaaatgagtcttgttgagttaa
taatattgatttacctttcaactgtattatagaagatatttgttttttta
aaatttttcccatcaaaacagtaaacagaatttgcttacatttcagagca
gaggcagatcctttgcagttttttcatttaatatagaacgaaaatactta
aatttcaccatgagttatacaatattgcacattcacacacatatatgcat
acctatatattttaatatgtataatatgcactatctttgggtcagcctgc
ccagcaagtagaaaaataagtaagacttctgattttggacaccttcaggc
attttgtgagacttaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_125924386_125925489
seq2: B6Ng01-240A06.g_62_1177 (reverse)

seq1  TTAAGTCACA-AAAATGGCTGAA-GTGTCCCAAATCAGAGGTCTTACTTA  48
      ||||||| || |||||| ||||| |||||| |||||||| ||||||||||
seq2  TTAAGTCTCACAAAATGCCTGAAGGTGTCCAAAATCAGAAGTCTTACTTA  50

seq1  -TTTTCTACCTTGCT-GGCAGGCTGA-CCAAAGATAGTGCATATTATACA  95
       ||||||| |||||| |||||||||| |||||||||||||||||||||||
seq2  TTTTTCTA-CTTGCTGGGCAGGCTGACCCAAAGATAGTGCATATTATACA  99

seq1  T-TATAAATATATA-GTATGCATATATGTGTGTGAATGTGCAATATTGTA  143
      | |  ||||||||| |||||||||||||||||||||||||||||||||||
seq2  TATTAAAATATATAGGTATGCATATATGTGTGTGAATGTGCAATATTGTA  149

seq1  TAACTCATTGTGAAATTTAAGTATTTTCG-TCTATATTTAATTGAAAAAC  192
      |||||||| |||||||||||||||||||| |||||| |||| ||||||| 
seq2  TAACTCATGGTGAAATTTAAGTATTTTCGTTCTATA-TTAAATGAAAAAA  198

seq1  CTGC-AAGGATCTGGCCTCTGCTCTGAAATGTAAGC-AATTCTGTTTACT  240
      |||| |||||||| |||||||||||||||||||||| |||||||||||||
seq2  CTGCAAAGGATCT-GCCTCTGCTCTGAAATGTAAGCAAATTCTGTTTACT  247

seq1  GTTTTGATGGG-AAAATTTTAAAAAAACAAATATCTTCTAT-ATACAGTT  288
      ||||||||||| ||||||||||||||||||||||||||||| ||||||||
seq2  GTTTTGATGGGAAAAATTTTAAAAAAACAAATATCTTCTATAATACAGTT  297

seq1  G-AAGGTAAATCAATATTATT-ACTCAACAAGACTCATTTTAGTCTATCA  336
      | ||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GAAAGGTAAATCAATATTATTAACTCAACAAGACTCATTTTAGTCTATCA  347

seq1  AAACTGAAGCAC-TTTTGAAAGTGATTTAGTTTTAGCTATTTTGATAAAA  385
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AAACTGAAGCACTTTTTGAAAGTGATTTAGTTTTAGCTATTTTGATAAAA  397

seq1  CAAAAACTTTGTGAAAATAATAATTGTTCCTAAAAGTACAAGACAGAAAA  435
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAACTTTGTGAAAATAATAATTGTTCCTAAAAGTACAAGACAGAAAA  447

seq1  TCTAAGACTAACCTCGTTAGTGAACTTTTCATTTATGTATAATTCTATGT  485
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGACTAACCTCGTTAGTGAACTTTTCATTTATGTATAATTCTATGT  497

seq1  CTGTTGTTGTGGTTTGAATGAGAAATATCCCCTGTAAGAGTCTGTCTTGG  535
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGTTGTGGTTTGAATGAGAAATATCCCCTGTAAGAGTCTGTCTTGG  547

seq1  AAAATCTTCTAGATTGCATTAAAAGGTAAAAGGTGCTAGTTATGGTCAGA  585
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCTTCTAGATTGCATTAAAAGGTAAAAGGTGCTAGTTATGGTCAGA  597

seq1  GTCTATTCTGGAAAAGCAAAAATATTAAATTATTAATGCATTTAGAATTA  635
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATTCTGGAAAAGCAAAAATATTAAATTATTAATGCATTTAGAATTA  647

seq1  TTATGCAAATGAGAGACAAAACAAAAACTCAGAATTTAATATAGGATATT  685
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGCAAATGAGAGACAAAACAAAAACTCAGAATTTAATATAGGATATT  697

seq1  AACAGAGCCAGACAAAAGCAGACATATCACAATATCCTATATTGAAATTC  735
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAGCCAGACAAAAGCAGACATATCACAATATCCTATATTGAAATTC  747

seq1  CTGTTAGATAAAGCAGACTTAAAACCTCTAATTGGCTTTTGCTCTGGAAA  785
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTAGATAAAGCAGACTTAAAACCTCTAATTGGCTTTTGCTCTGGAAA  797

seq1  ACCATTTTCAAGACATTTAATCTTTATTAAATTACATTATTTCCACCTCT  835
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTTTCAAGACATTTAATCTTTATTAAATTACATTATTTCCACCTCT  847

seq1  GTAACAAGGCTTTGATTGATACTAGATGACATGTATCACTCAAATATGCT  885
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACAAGGCTTTGATTGATACTAGATGACATGTATCACTCAAATATGCT  897

seq1  TTACATATTGGGAATGTAGGGAAAGAGATCTTTGGCCATCCTATATAGAG  935
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATATTGGGAATGTAGGGAAAGAGATCTTTGGCCATCCTATATAGAG  947

seq1  CTTTAATTTTGAGCACACGAAAAGCATTTCAAAAACTCTCCCCTCTCTGT  985
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAATTTTGAGCACACGAAAAGCATTTCAAAAACTCTCCCCTCTCTGT  997

seq1  ACCCCCTTTCCCCACTATGTTTCCCCCTTTCCCTCACTTTCCTCTTCCAT  1035
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCTTTCCCCACTATGTTTCCCCCTTTCCCTCACTTTCCTCTTCCAT  1047

seq1  TTTCTTGAGGCAGGGTCTGACTATGCCCAGCTTAAAACTCACTATGTAGC  1085
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTGAGGCAGGGTCTGACTATGCCCAGCTTAAAACTCACTATGTAGC  1097

seq1  CTAGCCTGGCCTTGAATTC  1104
      |||||||||||||||||||
seq2  CTAGCCTGGCCTTGAATTC  1116