BAC Information

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BAC

Clone NameB6Ng01-241I02
ChromosomeX (Build37)
Map Location 36,822,342 - 36,822,873
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040971, EG665352, LOC670495, Cul4b, Mcts1, C1galt1c1, EG665369, 6030498E09Rik, LOC547171, LOC670539, LOC100039700, 1700085A12Rik, LOC100039715
Downstream geneEG636756, EG636766, EG245391, LOC100039769
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-241I02.bB6Ng01-241I02.g
ACCGA051401GA051402
length1,171700
definitionB6Ng01-241I02.b B6Ng01-241I02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctttggaatgacaaatgggtaaagaaagaaaaagaaagaaatt
aagactctctagcaaatgaatgaaaatcaatgcactgcataccagaactt
atgagacacaggaaagcatttctcagagtcaagtcataactttaaatgct
tatataaacaaactaacaaacaaaactggagttctcatactagtatctta
aagcacaaaatatttatccaaccaaaactaatcaaaatatttagggacag
atactacatattcatcagatagatgaaagatctagagaaagaacaaatca
taaataaaatgagtatatggcaaagaataatcaaacgtatgactaaaatc
aataaaatagtaatcaagggaacaatacaaagaatcaatgaaacaaagag
ttgattatttgtgaaaatcaacaagatttacatatctgtatacatattaa
gtaaaaaacaaaaaaataatatctaaattaacaaaactagagaatcataa
tgacacagaacttcaaaactagtacgccaacaaattggaacttctaaatg
aaatggataattttttcaatagataccaattttcgaagtcaaatcaagat
cttatgagaactttaaacagacctataacccatacagaaatagaagtatc
ccctcaaaaaaatctaacagatattcaaaacggaataaaaacaaaactcc
tcaagctattgtacaaaatataaacaaaatacattttgcccgattcattt
tatgaggcctcagttactgaaacaacataaagaatgaacaacaaaaataa
gatagttacggatcaattatctgtatgaacataggtagaaaaatacacaa
taaatatctgcaaatcgaatcaaagaacacatccaaaaaatcacaaatca
tgatcaaataggcttcatcccagagattcatggatgattgaacaaatgaa
aataagtaaatgaaatctactatataaacaagctgagatcttggtccggg
accgcgaacttagaaattagtctgacaggtgagagggtgcgcagagaact
gacagctctggaacagacagaagcacagagcgctgagccagcaccctgtg
tggccggacagcagcacttcgaacgagacaggaccgccggcttggggagc
gaaccctaagcctaccagctc

gaattctcaggtatgaatgtttcatctattcagccatctaccatcaaggc
tcaaggaacatcatggaagaaaagaagaaagaatataagagccagtgaat
agggggaagagctgtgaaatatactctctggacattgcctgtttttattt
ttttttaagcaccaactcaactgggcttacatgcataggatctgtacaaa
atcaatcctatcaaaattccagcatggatgggggaaagcctccaaggcct
tacctatatcagaggagttattggcagttgatggcttctgagggaaagga
agtcactgtccttttgggacatggcagctgattgtttgatcataacccag
tagctagcaacacacatataggcagggttaactacttctgtgagatattt
actatacaaataagacataaagttgggaggtagatggggctaggcgagtt
ggaggaaggtatggtagatggatatgattgatatactttgtataagaata
tggttttcaaagaatgaataaaatattacttttaaaggggtgcaaaagaa
gacagtttattctttttgcaactccccacctataggatctaggggtagac
tgtaatcaagtttcttttacccaatggaaacatttgctattcagtaatct
ttctcttctaaactactgtcttggagtattctgaaaactctcacacacag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_36822342_36822873
seq2: B6Ng01-241I02.g_224_765 (reverse)

seq1  CTGTGTGTGAGAG-TTTCAGAA-ACTCCAAGACAGTAGTTTAG-AGAGAA  47
      ||||||||||||| |||||||| |||||||||||||||||||| ||||||
seq2  CTGTGTGTGAGAGTTTTCAGAATACTCCAAGACAGTAGTTTAGAAGAGAA  50

seq1  GATTTACTG-ATAGC-AATG-TTCCATTTGGT-AAAGAAACTTGATTACA  93
         |||||| ||||| |||| ||||||| ||| |||||||||||||||||
seq2  AGATTACTGAATAGCAAATGTTTCCATTGGGTAAAAGAAACTTGATTACA  100

seq1  GTCTA-CCCTAGATCCTATAGGT-GGGAGTTGC-AAAAGAATAAACTGTC  140
      ||||| ||||||||||||||||| ||||||||| ||||||||||||||||
seq2  GTCTACCCCTAGATCCTATAGGTGGGGAGTTGCAAAAAGAATAAACTGTC  150

seq1  TTCTTTTGCACCCCTTTAAAAGTAATATTTTATTCATTCTTTGAAAACCA  190
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTGCACCCCTTTAAAAGTAATATTTTATTCATTCTTTGAAAACCA  200

seq1  TATTCTTATACAAAGTATATCAATCATATCCATCTACCATACCTTCCTCC  240
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTTATACAAAGTATATCAATCATATCCATCTACCATACCTTCCTCC  250

seq1  AACTCGCCTAGCCCCATCTACCTCCCAACTTTATGTCTTATTTGTATAGT  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCGCCTAGCCCCATCTACCTCCCAACTTTATGTCTTATTTGTATAGT  300

seq1  AAATATCTCACAGAAGTAGTTAACCCTGCCTATATGTGTGTTGCTAGCTA  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATCTCACAGAAGTAGTTAACCCTGCCTATATGTGTGTTGCTAGCTA  350

seq1  CTGGGTTATGATCAAACAATCAGCTGCCATGTCCCAAAAGGACAGTGACT  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTTATGATCAAACAATCAGCTGCCATGTCCCAAAAGGACAGTGACT  400

seq1  TCCTTTCCCTCAGAAGCCATCAACTGCCAATAACTCCTCTGATATAGGTA  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCCCTCAGAAGCCATCAACTGCCAATAACTCCTCTGATATAGGTA  450

seq1  AGGCCTTGGAGGCTTTCCCCCATCCATGCTGGAATTTTGATAGGATTGAT  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTTGGAGGCTTTCCCCCATCCATGCTGGAATTTTGATAGGATTGAT  500

seq1  TTTGTACAGATCCTATGCATGTAAGCCCAGTTGAGTTGGTGC  532
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTACAGATCCTATGCATGTAAGCCCAGTTGAGTTGGTGC  542


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