MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-244K21
Chromosome	X (Build37)
Map Location	95,446,949 - 95,448,083
singlet/doublet	singlet
Overlap gene	Ar
Upstream gene	Eda2r, LOC668244
Downstream gene	LOC100042324, Ophn1, Yipf6, LOC100042932, Stard8, LOC436219, Efnb1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Eda2r (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245527 MGI:2442860
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668244 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668244
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Ar (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11835 MGI:88064
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042324 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042324
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Ophn1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:94190 MGI:2151070
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Yipf6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77929 MGI:1925179
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042932 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042932
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 25 ESTs, 4 Proteins pseudo : _no_value

name	Stard8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:236920 MGI:2448556
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC436219 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:436219
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 11 Proteins pseudo : _no_value

name	Efnb1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13641 MGI:102708
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Eda2r (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142353600 GeneID:245527 MGI:2442860
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ectodysplasin A2 isoform receptor transcript_id : NM_175540.4

name	Ar (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129906 GeneID:11835 MGI:88064
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : androgen receptor transcript_id : NM_013476.3

name	Ophn1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142345123 GeneID:94190 MGI:2151070
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : oligophrenin 1 transcript_id : NM_052976.3

name	Yipf6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:76253919 GeneID:77929 MGI:1925179
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Yip1 domain family, member 6 transcript_id : NM_207633.2

name	Stard8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:39841034 GeneID:236920 MGI:2448556
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : START domain containing 8 transcript_id : NM_199018.1

name	Efnb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802568 GeneID:13641 MGI:102708
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ephrin B1 transcript_id : NM_010110.3

name	Eda2r (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982201 CCDS:CCDS30293.1 GeneID:245527 MGI:2442860
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence ISS]; GO:0004872 - receptor activity [Evidence ISS]; GO:0005031 - tumor necrosis factor receptor activity [Evidence ISS] GO_process : GO:0051092 - activation of NF-kappaB transcription factor [Evidence ISS]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0009790 - embryonic development [Evidence ISS]; GO:0008544 - epidermis development [Evidence ISS]; GO:0046330 - positive regulation of JNK cascade [Evidence ISS] codon_start : 1 exception : mismatches in translation product : X linked ectodysplasin receptor protein_id : NP_780749.2

name	Ar (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7304901 CCDS:CCDS30294.1 GeneID:11835 MGI:88064
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS] [Evidence IDA]; GO:0005634 - nucleus [Evidence ISS] [Evidence IPI] [Evidence IDA] GO_function : GO:0004882 - androgen receptor activity [Evidence ISS] [Evidence IDA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0008289 - lipid binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0005496 - steroid binding [Evidence IEA]; GO:0003707 - steroid hormone receptor activity [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence ISS] [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0030521 - androgen receptor signaling pathway [Evidence IDA]; GO:0016049 - cell growth [Evidence ISS]; GO:0050875 - cellular physiological process [Evidence IDA]; GO:0001701 - embryonic development (sensu Mammalia) [Evidence IMP]; GO:0008584 - male gonad development [Evidence IMP]; GO:0019102 - male somatic sex determination [Evidence IMP]; GO:0045449 - regulation of transcription [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : testicular feminization product : androgen receptor protein_id : NP_038504.1

name	Ophn1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:16418475 CCDS:CCDS30295.1 GeneID:94190 MGI:2151070
definition	GO_component : GO:0015629 - actin cytoskeleton [Evidence IDA]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0003779 - actin binding [Evidence IDA]; GO:0005096 - GTPase activator activity [Evidence IEA] GO_process : GO:0030036 - actin cytoskeleton organization and biogenesis [Evidence IDA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : oligophrenin 1 protein_id : NP_443208.1

name	Yipf6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46519049 CCDS:CCDS30296.1 GeneID:77929 MGI:1925179
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : Yip1 domain family, member 6 protein_id : NP_997516.1

name	Stard8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:39841035 CCDS:CCDS30297.1 GeneID:236920 MGI:2448556
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005096 - GTPase activator activity [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : START domain containing 8 protein_id : NP_950183.1

name	Efnb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753726 CCDS:CCDS30298.1 GeneID:13641 MGI:102708
definition	GO_component : GO:0045121 - lipid raft [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0046875 - ephrin receptor binding [Evidence IPI]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007411 - axon guidance [Evidence IMP]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0009880 - embryonic pattern specification [Evidence IMP]; GO:0007399 - nervous system development [Evidence IEA]; GO:0001755 - neural crest cell migration [Evidence IMP]; GO:0042102 - positive regulation of T cell proliferation [Evidence IDA] codon_start : 1 note : Cek ligand; Cek5 ligand product : ephrin B1 protein_id : NP_034240.1

name	LOC668244 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668244
definition	number : 1 pseudo : _no_value

name	LOC100042324 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042324
definition	number : 2 pseudo : _no_value

name	LOC100042324 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042324
definition	number : 1 pseudo : _no_value

name	LOC100042932 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149271832 GeneID:100042932
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 25 ESTs, 4 Proteins product : similar to protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin) pseudo : _no_value transcript_id : XR_033864.1

name	LOC436219 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149271797 GeneID:436219
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 11 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) pseudo : _no_value transcript_id : XR_033477.1

clone name	MSMg01-530G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-086H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-213E20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-291D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-470G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-470G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-211O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-153A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-093I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-048N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-398P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-311D12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020M02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289L18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285B04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091F02
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-244K21.b	B6Ng01-244K21.g
ACC	GA053754	GA053755
length	1,176	1,116
definition	B6Ng01-244K21.b	B6Ng01-244K21.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctcacctgaggaataccgaaaggctgagaaacacctgaaaaaatg ttgaacatccttagtcatcagggaaatgcaaatcaaaacaaccctgagat tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc agatgctggcaaggatgtggagaaagaggaacactcctccattgttggtg ggattgcaagcttgtacaaccactctggaaatcagtctggcggttccccc gaaaattggacatagtactactagaggatccagcactacctctcctgggc atatatccagaagatgtcccaaccggtaagaaggacacatgctccactat gttcatagcagccttatttataatagccagaagctggaaagaacccagat gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa atggatggacctggagggcatcatcctgagtgaggtaaaaaggaactcac acaatatgtactcactgatacgtggatattagcccagaaacttaggatac ccaagatataagatacaacttgccaaacgcatgaaattcaagaagaatga agaccaaagtgtggacactttgtcccgtcttacaactgggaacaaaacac ccatggaaggagtttacagagacaaaatttggagctgtgaccaaaggatg gaccatctagtgattgccatatgcagggatccatcccataatcagcttcc aaatgctgacaccattgcatacactagcaagattttgctgaaaggaccca gatatagctgtctcttgtgagactatgccgggccctagcaacacagaagt ggatgatcacagtcagctattggatgggtcacacggcccctatggaggag ctagagaaatacccaaggagctaaagggaactgcaccctataaggtggta acacatatgacttactagtacccgggagctctttgaccttctagctgcat atgttattcaagattgacctagtcaccatcactggaagagaaggccattt ggtcaggcaacgttttatgtcctagttcaaggaattgccatggccaaaaa tggatatggtgggatgatgggatagt	gaattctgatcgatgtctgccatccactgacatatgttgctttgttctct ctctgtctctgtgtgtgtcttttcagtttggacagtaccagggaccatgt tttacccatcgactattactttccaccccagaagacctgcctgatctgtg gagatgaagcttctggctgtcactacggagctctcacttgtggcagctgc aaggtcttcttcaaaagagccgctgaaggtaaaaagtcttacctacttcc tgatattttccccttctcttttgcctagcagagaatgacagtgaccttcc agggcattctgataatcccagagactgagtcattagcaagggccctctca cagtacatgtaagatcaaagaagcccatggttatatttgctgagctgtct tggctgccctggttgtacaagcaatgatggtgatgtaggtggtcccagct ggtgcttggtggctcccaggactggaagcaaaattaatgatttgaaaaat taaatttccttcctgcttgttttcaactctgcttcctagtgaggaaaaga aaacttgtccttattagagaggttagaagtggagaaaccccaactgagta tacaggctgttttctgtagagaatatgagactgttccttagcaaaagctt cctggctttaaccccagaaaaggaagtgttctcactgttcagcagaccat cagtgtctgcacctgctccctcctgcttgctgcctctttgggacctctct ttgcaataaggactccaaggcaggaaaaaactcagagagaagcatcagag gactgctttcaggcatgacagttggttcagaatcccaacgtaacttgcat tttgtatccagctaagtgggatggagcctttacttgttatctgcactaat tatgatgttctaacctacatcatctagcagaaaacacccactcaggcctt tactgtagtcttagtgatccctcccttctatcacaggttgggggtgggag ctaaactttatcatacactctactacatcctcagtctgtactcgtctcaa gagtcactgtaggctgccctacatgtctactgtggctgcgaactcaagtt taaagatcctgcaact
quality values	Open. Hide. 58 26 15 25 58 53 54 34 26 46 58 58 54 31 28 58 34 28 35 42 41 62 62 54 62 62 54 62 62 62 62 47 33 47 46 24 51 38 43 56 62 54 47 62 62 62 62 62 47 54 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 59 62 59 51 56 56 62 59 59 59 62 62 62 62 62 62 62 62 59 59 59 59 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 59 59 62 62 59 62 62 62 62 59 49 62 62 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 56 62 62 62 54 54 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 54 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 56 62 62 62 54 62 62 62 62 56 62 56 62 62 62 62 62 54 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 47 54 62 62 62 62 62 62 62 62 56 56 62 56 43 47 47 62 62 56 62 62 62 54 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 56 62 62 62 56 62 56 62 48 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 54 62 54 62 62 62 52 62 62 62 62 62 62 62 54 62 62 54 62 62 62 62 54 62 62 62 62 62 62 58 54 54 54 50 52 54 47 52 52 58 58 58 54 42 58 58 54 41 54 54 45 52 39 26 58 58 47 52 54 48 52 58 58 49 54 54 45 48 58 58 54 29 54 52 52 52 40 52 50 47 58 54 52 54 58 58 52 54 50 52 46 52 50 46 46 46 52 52 54 54 54 52 43 52 54 41 41 42 45 49 46 52 42 39 37 42 45 26 39 47 52 54 41 52 30 45 47 47 50 41 50 50 33 51 52 40 24 30 45 51 35 50 53 53 52 40 40 46 49 47 28 16 50 50 50 53 53 49 46 50 52 51 37 42 50 46 52 53 29 51 51 58 54 37 53 40 53 23 19 20 39 31 28 51 27 27 50 50 50 18 44 14 50 49 32 37 31 53 53 46 54 50 28 16 32 50 50 58 37 27 36 41 43 50 50 40 37 44 48 31 41 28 28 31 35 43 40 30 32 33 37 12 40 40 46 42 42 39 58 39 34 37 39 25 41 17 10 38 31 13 6 35 30 32 39 39 39 51 35 29 29 39 40 40 33 29 49 25 39 37 47 29 50 50 42 32 42 39 21 39 18 32 27 27 42 18 19 39 40 38 21 37 19 38 37 37 32 28 11 26 23 24 34 43 31 40 25 33 30 45 41 39 37 24 44 30 19 23 25 46 18 37 13 34 39 24 53 41 26 34 52 37 26 30 39 24 18 43 28 54 18 28 33 18 42 32 40 25 20 33 29 29 45 40 34 32 33 29 21 32 23 31 32 31 28 39 26 20 21 32 13 27 35 30 26 19 18 32 31 40 25 28 31 30 29 47 38 18 12 29 13 23 26 31 21 30 32 31 31 35 30 24 42 19 18 8 21 31 13 31 24 25 21 31 32 29 27 27 46 22 6 40 24 25 19 9 33 32 22 17 13 29 21 15 21 35 26 32 33 23 35 21 27 38 31 28 16 26 19 18 31 32 18 18 33 36 26 34 24 30 18 31 19 34 38 30 32 33 31 22 23 32 24 33 21 48 48 33 25 31 22 22 14 8 6 25 20 13 31 21 14 14 36 15 26 28 14 33 9 20 46 28 10 20 12 24 21 6 22 30 21 32 8 8 29 11 26 20 22 24 33 14 28 12 29 30 31 16 29 11 6 11 10 7 30 22 6 31 10 9 11 9 13 14 23 32 15 26 19 15 16 17 25 6 13 16 6 9 6 24 13 31 48 7 9 5 12 14 21 19 22 21 19 10 11 10 9 5 7 8 7 8 34 32 21 27 13 16 22 12 19 21 7 10 8 5 6 13 14 4 3 3 4 7 20 7 11 22 10 4 5 9 7 5 8 7 22 17 20 9 8 19 18 18 20 4 6 10 8 6 8 13 7 14 9 20 17 6 6 14 20 9 6 5 11 13 30 29 4 1 8 23 8 6 5 5 6 5 13 13 4 8 5 3 5 6 5 7 19 9 6 9 4 5 7 7 9 6 3 11 4 13 9 11 25 6 5 4 4 9 3 8 4 8 4 17 8 4 18 6 10 3 9 7 4 4 9 14 16 6 3 4 5 9	Open. Hide. 62 47 42 47 62 62 62 62 47 54 56 51 44 43 49 56 59 62 59 62 59 59 62 62 59 59 59 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 59 62 62 62 59 62 54 54 59 59 62 59 62 59 62 62 62 59 62 62 62 62 59 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 59 59 62 62 62 62 62 59 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 59 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 38 62 54 62 62 47 62 62 62 62 62 62 62 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 54 54 58 58 58 58 58 58 58 49 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 54 58 54 47 58 54 58 54 52 54 58 49 42 58 58 58 58 58 52 58 58 58 58 41 47 54 54 58 58 58 54 42 58 58 58 58 58 58 58 58 54 58 54 58 58 58 58 58 58 58 58 58 58 58 58 58 51 58 58 58 52 58 58 51 53 42 58 58 58 51 58 58 58 58 49 51 58 51 51 41 51 58 45 28 58 58 58 58 58 50 58 58 58 48 42 53 58 58 51 51 48 54 58 52 49 50 52 53 58 52 54 37 54 50 49 51 53 58 58 50 53 51 58 58 39 51 58 44 42 49 53 53 42 50 51 51 47 36 26 54 42 47 39 49 50 51 58 50 51 54 50 51 58 51 52 53 51 41 51 39 58 38 51 50 39 52 45 42 54 32 51 27 49 54 52 49 40 42 49 49 47 24 37 37 54 51 50 29 27 51 47 37 49 49 51 49 40 51 54 49 32 53 45 49 44 39 40 39 49 18 36 42 22 51 42 53 39 53 45 40 39 38 40 40 37 40 40 51 33 38 40 33 32 40 39 29 41 23 37 37 41 41 31 40 40 53 37 40 40 53 40 31 32 51 33 52 40 31 31 52 38 32 31 45 31 53 33 40 42 42 32 40 45 32 38 29 33 37 53 32 32 47 41 16 9 41 45 31 31 37 32 51 45 30 31 30 31 41 26 37 23 46 17 14 31 36 42 30 18 25 32 31 31 27 24 31 51 46 46 46 21 31 43 35 31 13 42 21 42 31 31 31 18 31 23 37 31 19 23 46 29 38 30 21 30 38 31 38 48 35 29 8 10 17 23 29 31 31 31 26 29 26 22 21 30 27 20 31 24 24 24 38 25 27 31 48 42 32 31 32 27 31 23 26 30 32 29 43 32 23 36 48 48 33 31 31 32 37 21 30 21 32 35 42 19 36 28 31 35 47 32 19 13 23 25 33 24 32 22 29 48 26 18 30 27 25 29 9 22 20 24 22 23 34 27 27 34 35 23 29 14 23 20 21 24 37 19 32 39 43 16 21 23 20 12 21 32 32 32 27 34 34 32 32 29 22 32 28 27 23 11 34 48 23 5 4 11 22 48 30 18 11 24 21 9 10 14 14 13 23 36 24 13 28 24 32 20 28 18 21 28 10 13 16 8 16 15 14 19 19 47 12 12 13 34 21 19 9 9 13 4 3 11 15 28 6 19 22 5 8 33 38 34 34 24 8 8 34 21 15 13 15 30 13 34 17 16 6 32 7 17 30 21 7 12 4 7 6 17 8 10 5 11 20 13 7 22 5 9 17 13 8 10 20 15 6 17 6 28 4 12 13 12 3 1 4 6 11 20 25 13 5 8 4 6 8 13 10 13 2 2 3 5 6 15 16 10 14 17 22 8 10 12 6 6 8 1 4 5 11 13 5 15 8 19 6 12 20 16 7 5 10 11 10 10 19 9 13 5 22 17 17 4 17 7 8 9 3 2 2 3 2 3 4 9 14 8

Alignment Information

BAC End 1

BAC End 2

seq1: chrX_95446949_95448083
seq2: B6Ng01-244K21.g_65_1180

seq1  GAATTCTGATCGATGTCTGCCATCCACTGACATATGTTGCTTTGTTCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGATCGATGTCTGCCATCCACTGACATATGTTGCTTTGTTCTCT  50

seq1  CTCTGTCTCTGTGTGTGTCTTTTCAGTTTGGACAGTACCAGGGACCATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTCTCTGTGTGTGTCTTTTCAGTTTGGACAGTACCAGGGACCATGT  100

seq1  TTTACCCATCGACTATTACTTTCCACCCCAGAAGACCTGCCTGATCTGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCCATCGACTATTACTTTCCACCCCAGAAGACCTGCCTGATCTGTG  150

seq1  GAGATGAAGCTTCTGGCTGTCACTACGGAGCTCTCACTTGTGGCAGCTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGAAGCTTCTGGCTGTCACTACGGAGCTCTCACTTGTGGCAGCTGC  200

seq1  AAGGTCTTCTTCAAAAGAGCCGCTGAAGGTAAAAAGTCTTACCTACTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCTTCTTCAAAAGAGCCGCTGAAGGTAAAAAGTCTTACCTACTTCC  250

seq1  TGATATTTTCCCCTTCTCTTTTGCCTAGCAGAGAATGACAGTGACCTTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATTTTCCCCTTCTCTTTTGCCTAGCAGAGAATGACAGTGACCTTCC  300

seq1  AGGGCATTCTGATAATCCCAGAGACTGAGTCATTAGCAAGGGCCCTCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCATTCTGATAATCCCAGAGACTGAGTCATTAGCAAGGGCCCTCTCA  350

seq1  CAGTACATGTAAGATCAAAGAAGCCCATGGTTATATTTGCTGAGCTGTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTACATGTAAGATCAAAGAAGCCCATGGTTATATTTGCTGAGCTGTCT  400

seq1  TGGCTGCCCTGGTTGTACAAGCAATGATGGTGATGTAGGTGGTCCCAGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGCCCTGGTTGTACAAGCAATGATGGTGATGTAGGTGGTCCCAGCT  450

seq1  GGTGCTTGGTGGCTCCCAGGACTGGAAGCAAAATTAATGATTTGAAAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCTTGGTGGCTCCCAGGACTGGAAGCAAAATTAATGATTTGAAAAAT  500

seq1  TAAATTTCCTTCCTGCTTGTTTTCAACTCTGCTTCCTAGTGAGGAAAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTCCTTCCTGCTTGTTTTCAACTCTGCTTCCTAGTGAGGAAAAGA  550

seq1  AAACTTGTCCTTATTAGAGAGGTTAGAAGTGGAGAAACCCCAACTGAGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTGTCCTTATTAGAGAGGTTAGAAGTGGAGAAACCCCAACTGAGTA  600

seq1  TACAGGCTGTTTTCTGTAGAGAATATGAGACTGTTCCTTAGCAAAAGCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGCTGTTTTCTGTAGAGAATATGAGACTGTTCCTTAGCAAAAGCTT  650

seq1  CCTGGCTTTAACCCCAGAAAAGGAAGTGTTCTCACTGTTCAGCAGACCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCTTTAACCCCAGAAAAGGAAGTGTTCTCACTGTTCAGCAGACCAT  700

seq1  CAGTGTCTGCACCTGCTCCCTCCTGCTTGCTGCCTCTTTGGGACCTCTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTCTGCACCTGCTCCCTCCTGCTTGCTGCCTCTTTGGGACCTCTCT  750

seq1  TTGCAATAAGGACTCCAAGGCAGGAAAAAACTCAGAGAGAAGCATCAGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAATAAGGACTCCAAGGCAGGAAAAAACTCAGAGAGAAGCATCAGAG  800

seq1  GACTGCTTTCAGGGCATGACAGTTGGTTCAGAATCCCAACGTAACTTGCA  850
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GACTGCTTTCA-GGCATGACAGTTGGTTCAGAATCCCAACGTAACTTGCA  849

seq1  TTTTGTATCCAGCTAAGTGGGATGGAGCCTTTACTTGTTATCTGCACTAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTATCCAGCTAAGTGGGATGGAGCCTTTACTTGTTATCTGCACTAA  899

seq1  TTATGATGTTTCTAACCTACATCATCTAGCAG-AAACACCCACTCCAGGC  949
      |||||||| ||||||||||||||||||||||| ||||||||||| |||||
seq2  TTATGATG-TTCTAACCTACATCATCTAGCAGAAAACACCCACT-CAGGC  947

seq1  CTTTACTGTAGTCTTAGTGATCCCTCCCTTCTTAATCACAGGGTGGGGGT  999
      ||||||||||||||||||||||||||||||||  |||||||| |||||||
seq2  CTTTACTGTAGTCTTAGTGATCCCTCCCTTCT--ATCACAGGTTGGGGGT  995

seq1  GGGAGCTTAAACCTTTATTCATACACTCTACTACCATCCCTCAGTCTGGT  1049
      |||||||  || ||||| ||||||||||||||| ||| ||||||||| ||
seq2  GGGAGCT--AAACTTTA-TCATACACTCTACTA-CAT-CCTCAGTCT-GT  1039

seq1  ACTCCTTTCTCAAAGAGTCACTGGAAAGCTGCCCCTACATGGTCTACTGT  1099
      |||| | ||   |||||||||| | | |||| |||||||| |||||||||
seq2  ACTCGTCTC---AAGAGTCACT-GTAGGCTG-CCCTACAT-GTCTACTGT  1083

seq1  GGCTGCAGACTCAGTTTTAAAGATTCCTTTGCAACT  1135
      ||||||  |||||  ||||||||| |   |||||||
seq2  GGCTGCGAACTCAAGTTTAAAGATCC---TGCAACT  1116

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information