BAC Information

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BAC

Clone NameB6Ng01-245E09
ChromosomeX (Build37)
Map Location 60,191,994 - 60,193,169
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666654, LOC385367, LOC671741, 4933402E13Rik, 4931400O07Rik, 1700019B21Rik, LOC671878, LOC666695
Downstream geneEG627420
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-245E09.bB6Ng01-245E09.g
ACCGA054199GA054200
length1,2021,164
definitionB6Ng01-245E09.b B6Ng01-245E09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
ctaggggtgaaatagatatgaaatcagtatgatgtggtctgtatcatcta
ttctggattctagaggggaaaaatttgcttctaagttcagccaatttatc
aaaagagctaattcattataatacaatattgtgtgatttggttggaggcc
tttttactagaacttgcctacagttcctatacattttccacaactatttt
gtacataggcttgatggattatctcaattttcagattgatgaaatgtaga
gtcacctgtgagacagacctttgagaatacctgtgtaggactacatatga
tgaatggcaacatttcctggtttggaatattggactatatataaatactt
taaaaagttgaaagtgaactgagtacaaacatgactcttggtcttcttct
cctatgggatgcaacatgagcacagattttttttctttttctttttgatt
tttattagatattttcttcatttacatttcaaatgctatcttgatatttc
cctataccccccttactcccctatccactgactcccacttcttggccctg
gtgttcccctgtactggggcatataaagtttgtaagaccaaggggcttct
cttcccaatgatggccgactaggccatcttctgctacatatgcagctaaa
gacatgagctctgtctgactgtgtggtactgatacaccaagagacaggta
gatcaatggaatagaattgaagacacagacatgaactcacacacttatgg
tcactcgatctttgacaagggagctaaaaccatccagtggaaaaaagaca
acatttttcaacaaatggtgctaccacaactggcagtttatcatgtagaa
gaatgcgaatttgatccattcttatctccttgttcaaagctcaagtctaa
gtggatcaaagaaccccacattaaaccagaaacactggaaacttattaca
ggagaaagtggggggaaaagtctttgaagaatatgggccacagggggaaa
aattccaatggagcagaagaatcttaaatctccagctacttgttggcctt
tctcaccatggatagaacttaactttcaaaaggtttaaatcaactaaatc
ttccttccactgataggatttttatgaagtattttgattactgggagaag
aaaaccagggaacataagactccctaagttgattgcttattttaaccaaa
tc
gaattcaatagtcttagtagaaagatggtgggtaggagggaactgtgtgg
gaaaggggattagtaggggaatgtgggtaaatcagagtcaagtgtaggga
gacacagggaagaagtggccaaatgtccaggaggatggatggaaatatgc
aggttgtctggagggagcatctggagatcatgtcttagacctgggataat
ggaggttcccaagaattactaggagtaaccttagctgagggtgataatgg
aggttcccaagaatcaatgggagtgaccttagctgagggtcacagcagtg
gagatatgtaaccttaataggccaccttctgttgtcagccagtaacccca
gtagaacaataggaacaccaacccacccaataaattttgacccagaattg
tcctgcctacaaaaaatttaggagttgagggaatgaccaagcaataacca
gtctaactagagacacatcccatgggcaagaacctgtccccaacactact
aatgatattctgtttgatttcagacagaagcatgttgttttttgatagtc
tctacccagcagctacctcagacagatacagagacccaaagaccaatatt
ggatggagttgggggctcctatgccagaatagagaaaaggactgaagggc
ctgatagggtttagaaactcaacaacaagaccaacagtgtcaaataaact
tgaccatcaggatctctcagagactgaaccaaagcacatacatgggctga
cctacccctatcccagatggacagacagatagacacacacacatgcacac
tcatgtgtagcatatgtgtagcttggtcttcatatgggtccaaacaactg
gagcagtgtgtctcccaaaagctgttacctggatgtgggatatattattc
tatttggaattgggctgccttgtcttgggccttagtgagaggaggatgtg
ccagacccaaagagatttgatatgcccaggttaggaatacccaaagtggg
ggtcccaatctcccagaggagaaggagaaaagcaggggaaagaggtaaat
gtggtaaggattatccagggagggggacacgccagtgcctgcatagaggt
gtaataatcgacaattcaattttcaaaaaattaaaattaattaaagacat
gtgtttcaacatgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_60191994_60193169
seq2: B6Ng01-245E09.b_56_1257

seq1  CTAGGGGTGAAATAGATATGAAATCAGTATGATGTGGTCTGTATCATCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGGGTGAAATAGATATGAAATCAGTATGATGTGGTCTGTATCATCTA  50

seq1  TTCTGGATTCTAGAGGGGAAAAATTTGCTTCTAAGTTCAGCCAATTTATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGATTCTAGAGGGGAAAAATTTGCTTCTAAGTTCAGCCAATTTATC  100

seq1  AAAAGAGCTAATTCATTATAATACAATATTGTGTGATTTGGTTGGAGGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAGCTAATTCATTATAATACAATATTGTGTGATTTGGTTGGAGGCC  150

seq1  TTTTTACTAGAACTTGCCTACAGTTCCTATACATTTTCCACAACTATTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTACTAGAACTTGCCTACAGTTCCTATACATTTTCCACAACTATTTT  200

seq1  GTACATAGGCTTGATGGATTATCTCAATTTTCAGATTGATGAAATGTAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATAGGCTTGATGGATTATCTCAATTTTCAGATTGATGAAATGTAGA  250

seq1  GTCACCTGTGAGACAGACCTTTGAGAATACCTGTGTAGGACTACATATGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCTGTGAGACAGACCTTTGAGAATACCTGTGTAGGACTACATATGA  300

seq1  TGAATGGCAACATTTCCTGGTTTGGAATATTGGACTATATATAAATACTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGGCAACATTTCCTGGTTTGGAATATTGGACTATATATAAATACTT  350

seq1  TAAAAAGTTGAAAGTGAACTGAGTACAAACATGACTCTTGGTCTTCTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAGTTGAAAGTGAACTGAGTACAAACATGACTCTTGGTCTTCTTCT  400

seq1  CCTATGGGATGCAACATGAGCACAGATTTTTTTTCTTTTTCTTTTTGATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATGGGATGCAACATGAGCACAGATTTTTTTTCTTTTTCTTTTTGATT  450

seq1  TTTATTAGATATTTTCTTCATTTACATTTCAAATGCTATCTTGATATTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTAGATATTTTCTTCATTTACATTTCAAATGCTATCTTGATATTTC  500

seq1  CCTATACCCCCCTTACTCCCCTATCCACTGACTCCCACTTCTTGGCCCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATACCCCCCTTACTCCCCTATCCACTGACTCCCACTTCTTGGCCCTG  550

seq1  GTGTTCCCCTGTACTGGGGCATATAAAGTTTGTAAGACCAAGGGGCTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCCCCTGTACTGGGGCATATAAAGTTTGTAAGACCAAGGGGCTTCT  600

seq1  CTTCCCAATGATGGCCGACTAGGCCATCTTCTGCTACATATGCAGCTAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCAATGATGGCCGACTAGGCCATCTTCTGCTACATATGCAGCTAAA  650

seq1  GACATGAGCTCTGTCTGACTGTGTGGTACTGATACACCAAGAGACAGGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGAGCTCTGTCTGACTGTGTGGTACTGATACACCAAGAGACAGGTA  700

seq1  GATCAATGGAATAGAATTGAAGACACAGACATGAACTCACACACTTATGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAATGGAATAGAATTGAAGACACAGACATGAACTCACACACTTATGG  750

seq1  TCACTCGATCTTTGACAAGGGAGCTAAAACCATCCAGTGGAAAAAAGACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCGATCTTTGACAAGGGAGCTAAAACCATCCAGTGGAAAAAAGACA  800

seq1  ACA-TTTTCAACAAATGGTGCTACCACAACTGGCAG-TTATCATGTAGAA  848
      ||| |||||||||||||||||||||||||||||||| |||||||||||||
seq2  ACATTTTTCAACAAATGGTGCTACCACAACTGGCAGTTTATCATGTAGAA  850

seq1  GAATGCGAA-TTGATCCATTCTTATCTCCTTGTTCAAAGCTCAAGTCTAA  897
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCGAATTTGATCCATTCTTATCTCCTTGTTCAAAGCTCAAGTCTAA  900

seq1  GTGGATCAAAGAACCCCACATAAAACCAGAAACACT-GAAACTTA-TACA  945
      ||||||||||||||||||||| |||||||||||||| |||||||| ||||
seq2  GTGGATCAAAGAACCCCACATTAAACCAGAAACACTGGAAACTTATTACA  950

seq1  GGAGAAAGT--GGGGAAAAGTC-TTGAAG-ATATGGG-CACA-GGGGAAA  989
      |||||||||  ||||||||||| |||||| ||||||| |||| |||||||
seq2  GGAGAAAGTGGGGGGAAAAGTCTTTGAAGAATATGGGCCACAGGGGGAAA  1000

seq1  AATTCCA--TGAGCAGA--GATCTT-AATCTCCAGCTAC-TGT--GGCTT  1031
      |||||||   |||||||   ||||| ||||||||||||| |||  | |||
seq2  AATTCCAATGGAGCAGAAGAATCTTAAATCTCCAGCTACTTGTTGGCCTT  1050

seq1  CCTCACCAT-GATAGA--CTAAC-TTCAAA--GTTTAAATCAAACTAAAT  1075
       |||||||| ||||||   |||| ||||||  ||||||||| ||||||| 
seq2  TCTCACCATGGATAGAACTTAACTTTCAAAAGGTTTAAATC-AACTAAA-  1098

seq1  TCTTCCT--CACTTAAATAGATTTTATTGAAGTATTTTTGAATAACTGGA  1123
      |||||||  |||| | |  ||||||  ||||||| |||||| ||   |||
seq2  TCTTCCTTCCACTGATA-GGATTTTTATGAAGTA-TTTTGATTACTGGGA  1146

seq1  GAAG-AAACCA-GGACCATAAGACTCCCCAAGTTGATTGCTTATTTTAA-  1170
      |||| |||||| ||| |||||||||||| |||||||||||||||||||| 
seq2  GAAGAAAACCAGGGAACATAAGACTCCCTAAGTTGATTGCTTATTTTAAC  1196

seq1  CAAATC  1176
      ||||||
seq2  CAAATC  1202