BAC Information

Click to search

BAC

Clone NameB6Ng01-249N01
ChromosomeX (Build37)
Map Location 110,681,793 - 110,682,608
singlet/doubletsinglet
Overlap geneDach2
Upstream geneZfp711, Pof1b, LOC623412, EG623428, LOC100039112, Chm, EG664918
Downstream geneLOC237016, EG664945, EG634881, LOC100039201, Klhl4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-249N01.bB6Ng01-249N01.g
ACCGA057537GA057538
length1,104817
definitionB6Ng01-249N01.b B6Ng01-249N01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttttttagctctgagcccatttttgatgcggttatttgattttc
tggagtccaccttcttgagttctttatatatattggatattagtccccta
tctgatttaggataggtaaagatcctttcccaatctgttggtggcctttt
tgtcttattgacggtgtcttttgccttacagaagctttgcagtttcatga
ggtcccatttgtcaattctcgatgttatagcaaaagccattgctgttcta
ttcaggaattcttcctctgtgcccatatcatcccggcttttacccacttt
ctcctctatatgtttcagtgtctctggttttatgtggagatccttgatcc
atttagatttgaccttagtacaaggagataggagtggatcaattcgcatt
cttctatatgataaccaccagttgtgccagcaccatttgttaaaaatgct
cttttgtccactggatggttttagctcccttgtcaaagataaagtgacca
tacgtgtgtgggttcatttctgggtcttcaaatctattccattggtctaa
ttttctgtccctataccagtaccatgccgtttttatcacaattgctctgt
agtaaagctttaggtcaggcattgtgattccaccagaggttttttttttt
tttttttttttttttttcaatccttgagaagagtttttgctatcctaggt
ttttttgttattccaagtgaatttgcagattgctctttctcattcgttga
agaactgtgttggaattttatgtagattgcattgaatctgtagattgctt
ttgcaagatagcaatttttacaatatttgatcctgccaacccatgagcat
ggggagatctttccatcttctgagatcttctttaattttcttttcttcag
agacttgaagttctttatcatacagatatttcacttccttagttagagtc
atgccagggtattttatattatttggtgactattgaaagggtgtgtttcc
taatttctttctcaggctgttattcgtgggtaaagaaggcattgaacttg
ttggattatttaattcagctaatcacgagctgttttatcagggttaggaa
gtct
gaattccagcattggtatagtagagtgaagagaatcctttgattttctag
ctagctttaagggagagaccatgtctcaagcaatagggtcaaaagtggtt
gagcaagacatccaacattgaactgtggcttggcttccacctgtgagtgt
gaactgaagttcaaacacattaacaagtacacattcatacacacaaatgc
cattgatgcatgcttcttttttttctgagagtattctttttaattgagta
ttctctcaatttgtatttgattgtgccacattagtgtttatttcattaat
ctagattagtaaattttgcctcttgcattataatataaaataaaagagtt
ctactagaattcaccatgtagccctagctagccccaaacacaaagcaaat
tttatacctcagccaaacaaggacaagaatgataagaacgcaccaccttt
ttcagctatgtttacttagtttttgtcttattgcagattaaaatcagtgc
ctatagcattcttagcaaggcatctgccatggagcaacattccatacccc
acccctctggatttattattacaagaatctttaaatggcaattatgctct
agcttataccttctctttctcttcacaatagatcctcaacagtgatttta
ccattttatagtttcatagataagaattatatttacaccatttctaccca
tttctcccatgccaactcctcccatgtcccccgttccctattgaactctt
agtttttattgctacatatatatatatatatatatatatatatatatata
tatatatatgggaatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_110681793_110682608
seq2: B6Ng01-249N01.g_65_881

seq1  GAATTCCAGCATTGGTATAGTAGAGTGAAGAGAATCCTTTGATTTTCTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGCATTGGTATAGTAGAGTGAAGAGAATCCTTTGATTTTCTAG  50

seq1  CTAGCTTTAAGGGAGAGACCATGTCTCAAGCAATAGGGTCAAAAGTGGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTTTAAGGGAGAGACCATGTCTCAAGCAATAGGGTCAAAAGTGGTT  100

seq1  GAGCAAGACATCCAACATTGAACTGTGGCTTGGCTTCCACCTGTGAGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAAGACATCCAACATTGAACTGTGGCTTGGCTTCCACCTGTGAGTGT  150

seq1  GAACTGAAGTTCAAACACATTAACAAGTACACATTCATACACACAAATGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGAAGTTCAAACACATTAACAAGTACACATTCATACACACAAATGC  200

seq1  CATTGATGCATGCTTCTTTTTTTTCTGAGAGTATTCTTTTTAATTGAGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGATGCATGCTTCTTTTTTTTCTGAGAGTATTCTTTTTAATTGAGTA  250

seq1  TTCTCTCAATTTGTATTTGATTGTGCCACATTAGTGTTTATTTCATTAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCAATTTGTATTTGATTGTGCCACATTAGTGTTTATTTCATTAAT  300

seq1  CTAGATTAGTAAATTTTGCCTCTTGCATTATAATATAAAATAAAAGAGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGATTAGTAAATTTTGCCTCTTGCATTATAATATAAAATAAAAGAGTT  350

seq1  CTACTAGAATTCACCATGTAGCCCTAGCTAGCCCCAAACACAAAGCAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTAGAATTCACCATGTAGCCCTAGCTAGCCCCAAACACAAAGCAAAT  400

seq1  TTTATACCTCAGCCAAACAAGGACAAGAATGATAAGAACGCACCACCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATACCTCAGCCAAACAAGGACAAGAATGATAAGAACGCACCACCTTT  450

seq1  TTCAGCTATGTTTACTTAGTTTTTGTCTTATTGCAGATTAAAATCAGTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCTATGTTTACTTAGTTTTTGTCTTATTGCAGATTAAAATCAGTGC  500

seq1  CTATAGCATTCTTAGCAAGGCATCTGCCATGGAGCAACATTCCATACCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAGCATTCTTAGCAAGGCATCTGCCATGGAGCAACATTCCATACCCC  550

seq1  ACCCCTCTGGATTTATTATTACAAGAATCTTTAAATGGCAATTATGCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTCTGGATTTATTATTACAAGAATCTTTAAATGGCAATTATGCTCT  600

seq1  AGCTTATACCTTCTCTTTCTCTTCACAATAGATCCTCAACAGTGATTTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTATACCTTCTCTTTCTCTTCACAATAGATCCTCAACAGTGATTTTA  650

seq1  CCATTTTATAGTTTCATAGATAAGAATTATATTTACACCATTTCTACCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTTATAGTTTCATAGATAAGAATTATATTTACACCATTTCTACCCA  700

seq1  TTTCTCCCATGCCAACTCCTCCCATGTCCCCCGTTCCCTATTGAACTCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCCCATGCCAACTCCTCCCATGTCCCCCGTTCCCTATTGAACTCTT  750

seq1  AGTTTTTATTGCTACATATATATATATATATATATATATATATATATATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTTATTGCTACATATATATATATATATATATATATATATATATATA  800

seq1  TATATATAT-GGAATGA  816
      ||||||||| |||||||
seq2  TATATATATGGGAATGA  817